RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 CUX2O14529 1486 aa15.79■□□□□ 0.12
HDAC6-203ENST00000376619 KIF27Q86VH2 1401 aa15.79■□□□□ 0.12
HDAC6-203ENST00000376619 MRC2Q9UBG0 1479 aa15.78■□□□□ 0.12
HDAC6-203ENST00000376619 EEA1Q15075 1411 aa15.78■□□□□ 0.12
HDAC6-203ENST00000376619 SENP3Q9H4L4 574 aaPredicted RBP15.76■□□□□ 0.11
HDAC6-203ENST00000376619 MTUS2Q5JR59 1369 aa15.76■□□□□ 0.11
HDAC6-203ENST00000376619 RAD54L2Q9Y4B4 1467 aa15.74■□□□□ 0.11
HDAC6-203ENST00000376619 CARMIL1Q5VZK9 1371 aa15.73■□□□□ 0.11
HDAC6-203ENST00000376619 ANP32CO43423 234 aa15.72■□□□□ 0.11
HDAC6-203ENST00000376619 AQRO60306 1485 aaKnown RBP eCLIP15.7■□□□□ 0.13e-9■■■■■ 27.5
HDAC6-203ENST00000376619 SLC4A1APQ9BWU0 796 aaKnown RBP15.7■□□□□ 0.1
HDAC6-203ENST00000376619 OSCARQ8IYS5 282 aa15.69■□□□□ 0.1
HDAC6-203ENST00000376619 FOXD1Q16676 465 aa15.69■□□□□ 0.1
HDAC6-203ENST00000376619 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.68■□□□□ 0.15e-7■■■■□ 20.8
HDAC6-203ENST00000376619 KDM2AQ9Y2K7 1162 aa15.67■□□□□ 0.1
HDAC6-203ENST00000376619 TONSLQ96HA7 1378 aa15.67■□□□□ 0.1
HDAC6-203ENST00000376619 SALL2Q9Y467 1007 aaPredicted RBP15.66■□□□□ 0.1
HDAC6-203ENST00000376619 VPS8Q8N3P4 1428 aa15.66■□□□□ 0.1
HDAC6-203ENST00000376619 IRX6P78412 446 aaPredicted RBP15.66■□□□□ 0.1
HDAC6-203ENST00000376619 FGD5Q6ZNL6 1462 aa15.66■□□□□ 0.1
HDAC6-203ENST00000376619 TOPBP1Q92547 1522 aa15.64■□□□□ 0.09
HDAC6-203ENST00000376619 KCNH8Q96L42 1107 aa15.64■□□□□ 0.09
HDAC6-203ENST00000376619 FAM9BQ8IZU0 186 aa15.63■□□□□ 0.09
HDAC6-203ENST00000376619 URB2Q14146 1524 aaKnown RBP15.63■□□□□ 0.09
HDAC6-203ENST00000376619 KIF21AQ7Z4S6 1674 aa15.61■□□□□ 0.09
HDAC6-203ENST00000376619 FKBP8Q14318 412 aa15.61■□□□□ 0.09
HDAC6-203ENST00000376619 CYB5RLQ6IPT4 315 aa15.6■□□□□ 0.09
HDAC6-203ENST00000376619 CCNB3Q8WWL7 1395 aa15.6■□□□□ 0.09
HDAC6-203ENST00000376619 HNRNPUQ00839 825 aaKnown RBP eCLIP15.58■□□□□ 0.08
HDAC6-203ENST00000376619 ERICH6Q7L0X2 663 aa15.57■□□□□ 0.08
HDAC6-203ENST00000376619 POLA1P09884 1462 aaPredicted RBP15.56■□□□□ 0.08
HDAC6-203ENST00000376619 FHOD3Q2V2M9 1422 aa15.56■□□□□ 0.08
HDAC6-203ENST00000376619 TRHP20396 242 aaPredicted RBP15.55■□□□□ 0.08
HDAC6-203ENST00000376619 CDK11AQ9UQ88 783 aaPredicted RBP15.55■□□□□ 0.08
HDAC6-203ENST00000376619 ZNF608Q9ULD9 1512 aaPredicted RBP15.55■□□□□ 0.08
HDAC6-203ENST00000376619 RGL3Q3MIN7 710 aa15.54■□□□□ 0.08
HDAC6-203ENST00000376619 NPM1P06748 294 aaKnown RBP eCLIP15.52■□□□□ 0.08
HDAC6-203ENST00000376619 CUX1P39880 1505 aa15.52■□□□□ 0.07
HDAC6-203ENST00000376619 IFT140Q96RY7 1462 aa15.51■□□□□ 0.07
HDAC6-203ENST00000376619 GAPVD1Q14C86 1478 aa15.5■□□□□ 0.07
HDAC6-203ENST00000376619 SYNJ1O43426 1573 aa15.5■□□□□ 0.07
HDAC6-203ENST00000376619 RAB3GAP2Q9H2M9 1393 aa15.49■□□□□ 0.07
HDAC6-203ENST00000376619 DNMBPQ6XZF7 1577 aa15.48■□□□□ 0.07
HDAC6-203ENST00000376619 IGF1RP08069 1367 aa15.47■□□□□ 0.07
HDAC6-203ENST00000376619 CFDP1Q9UEE9 299 aaPredicted RBP15.46■□□□□ 0.07
HDAC6-203ENST00000376619 CHGAP10645 457 aaKnown RBP15.46■□□□□ 0.07
HDAC6-203ENST00000376619 PLPPR3Q6T4P5 718 aa15.44■□□□□ 0.06
HDAC6-203ENST00000376619 TSPY4P0CV99 314 aa15.42■□□□□ 0.06
HDAC6-203ENST00000376619 TSPY10P0CW01 314 aa15.42■□□□□ 0.06
HDAC6-203ENST00000376619 JPH4Q96JJ6 628 aa15.41■□□□□ 0.06
HDAC6-203ENST00000376619 MRS2Q9HD23 443 aa15.4■□□□□ 0.06
HDAC6-203ENST00000376619 SNAPC4Q5SXM2 1469 aa15.39■□□□□ 0.05
HDAC6-203ENST00000376619 PLEKHD1A6NEE1 506 aa15.39■□□□□ 0.05
HDAC6-203ENST00000376619 GRIN2BQ13224 1484 aa15.39■□□□□ 0.05
HDAC6-203ENST00000376619 BCL11AQ9H165 835 aa15.39■□□□□ 0.05
HDAC6-203ENST00000376619 DHX57Q6P158 1386 aaKnown RBP15.38■□□□□ 0.05
HDAC6-203ENST00000376619 WDR62O43379 1518 aa15.37■□□□□ 0.05
HDAC6-203ENST00000376619 ARAP1Q96P48 1450 aa15.37■□□□□ 0.05
HDAC6-203ENST00000376619 EIF4G2P78344 907 aaKnown RBP eCLIP15.36■□□□□ 0.052e-9■■■■■ 73
HDAC6-203ENST00000376619 SETD5Q9C0A6 1442 aa15.34■□□□□ 0.05
HDAC6-203ENST00000376619 ZNF644Q9H582 1327 aaPredicted RBP15.33■□□□□ 0.04
HDAC6-203ENST00000376619 KIF21BO75037 1637 aa15.33■□□□□ 0.04
HDAC6-203ENST00000376619 THOC2Q8NI27 1593 aaKnown RBP15.32■□□□□ 0.04
HDAC6-203ENST00000376619 FHAD1B1AJZ9 1412 aa15.31■□□□□ 0.04
HDAC6-203ENST00000376619 SUPT16HQ9Y5B9 1047 aaKnown RBP15.31■□□□□ 0.04
HDAC6-203ENST00000376619 PHLDB1Q86UU1 1377 aa15.31■□□□□ 0.04
HDAC6-203ENST00000376619 TOP2BQ02880 1626 aa15.29■□□□□ 0.04
HDAC6-203ENST00000376619 DNAJC5Q9H3Z4 198 aa15.28■□□□□ 0.04
HDAC6-203ENST00000376619 TMC1Q8TDI8 760 aa15.27■□□□□ 0.03
HDAC6-203ENST00000376619 PPP1R15AO75807 674 aaPredicted RBP15.26■□□□□ 0.03
HDAC6-203ENST00000376619 HSPA5P11021 654 aaKnown RBP15.26■□□□□ 0.03
HDAC6-203ENST00000376619 ARHGAP35Q9NRY4 1499 aa15.25■□□□□ 0.03
HDAC6-203ENST00000376619 L3MBTL2Q969R5 705 aa15.25■□□□□ 0.03
HDAC6-203ENST00000376619 MPHOSPH9Q99550 1183 aa15.25■□□□□ 0.03
HDAC6-203ENST00000376619 ABCA10Q8WWZ4 1543 aa15.25■□□□□ 0.03
HDAC6-203ENST00000376619 HNRNPMP52272 730 aaKnown RBP eCLIP15.25■□□□□ 0.03
HDAC6-203ENST00000376619 DCAF11Q8TEB1 546 aa15.24■□□□□ 0.03
HDAC6-203ENST00000376619 PKD2Q13563 968 aa15.23■□□□□ 0.03
HDAC6-203ENST00000376619 CARD11Q9BXL7 1154 aa15.22■□□□□ 0.03
HDAC6-203ENST00000376619 NPM2Q86SE8 214 aaKnown RBP15.2■□□□□ 0.02
HDAC6-203ENST00000376619 EIF4G3O43432 1585 aaKnown RBP15.19■□□□□ 0.02
HDAC6-203ENST00000376619 CARMIL2Q6F5E8 1435 aa15.19■□□□□ 0.02
HDAC6-203ENST00000376619 CLSPNQ9HAW4 1339 aa15.19■□□□□ 0.02
HDAC6-203ENST00000376619 SYNJ2O15056 1496 aa15.18■□□□□ 0.02
HDAC6-203ENST00000376619 PRXQ9BXM0 1461 aa15.17■□□□□ 0.02
HDAC6-203ENST00000376619 PRG4Q92954 1404 aaPredicted RBP15.16■□□□□ 0.02
HDAC6-203ENST00000376619 MAGI1Q96QZ7 1491 aaPredicted RBP15.16■□□□□ 0.02
HDAC6-203ENST00000376619 PRDM2Q13029 1718 aa15.15■□□□□ 0.02
HDAC6-203ENST00000376619 CC2D1BQ5T0F9 858 aaKnown RBP15.14■□□□□ 0.01
HDAC6-203ENST00000376619 PTPRGP23470 1445 aa15.14■□□□□ 0.01
HDAC6-203ENST00000376619 FMN1Q68DA7 1419 aa15.14■□□□□ 0.01
HDAC6-203ENST00000376619 TNNT2P45379 298 aaPredicted RBP15.13■□□□□ 0.01
HDAC6-203ENST00000376619 GRIN2AQ12879 1464 aa15.12■□□□□ 0.01
HDAC6-203ENST00000376619 PLEKHG5O94827 1062 aa15.11■□□□□ 0.01
HDAC6-203ENST00000376619 B4GALNT3Q6L9W6 998 aa15.1■□□□□ 0.01
HDAC6-203ENST00000376619 NUP155O75694 1391 aa15.08■□□□□ 0
HDAC6-203ENST00000376619 BIVM-ERCC5R4GMW8 1640 aa15.07■□□□□ 0
HDAC6-203ENST00000376619 FAM69CQ0P6D2 419 aa15.07■□□□□ 0
HDAC6-203ENST00000376619 SAFB2Q14151 953 aaKnown RBP eCLIP15.07■□□□□ 0
HDAC6-203ENST00000376619 TARBP1Q13395 1621 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms