RNA–Protein interactions for RNA: ENST00000376575.7

DDR1-228, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene DDR1, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-228ENST00000376575 ARHGEF11O15085 1522 aa33.09■■■□□ 2.89
DDR1-228ENST00000376575 RIMBP3CA6NJZ7 1639 aa33.05■■■□□ 2.88
DDR1-228ENST00000376575 RIMBP3BA6NNM3 1639 aa33.05■■■□□ 2.88
DDR1-228ENST00000376575 RIMBP3Q9UFD9 1639 aa33.05■■■□□ 2.88
DDR1-228ENST00000376575 KIF21BO75037 1637 aa33.02■■■□□ 2.88
DDR1-228ENST00000376575 JPH4Q96JJ6 628 aa33■■■□□ 2.87
DDR1-228ENST00000376575 IQGAP2Q13576 1575 aa32.94■■■□□ 2.86
DDR1-228ENST00000376575 CTTNBP2Q8WZ74 1663 aa32.91■■■□□ 2.86
DDR1-228ENST00000376575 ERCC6L2Q5T890 1561 aa32.91■■■□□ 2.86
DDR1-228ENST00000376575 PRG4Q92954 1404 aaPredicted RBP32.89■■■□□ 2.86
DDR1-228ENST00000376575 ARAP1Q96P48 1450 aa32.86■■■□□ 2.85
DDR1-228ENST00000376575 UGGT2Q9NYU1 1516 aa32.83■■■□□ 2.85
DDR1-228ENST00000376575 GOLGA3Q08378 1498 aa32.8■■■□□ 2.84
DDR1-228ENST00000376575 DISP1Q96F81 1524 aa32.75■■■□□ 2.83
DDR1-228ENST00000376575 CYB5RLQ6IPT4 315 aa32.71■■■□□ 2.83
DDR1-228ENST00000376575 CARMIL2Q6F5E8 1435 aa32.69■■■□□ 2.82
DDR1-228ENST00000376575 KIAA0556O60303 1618 aa32.64■■■□□ 2.82
DDR1-228ENST00000376575 UBTFP17480 764 aaKnown RBP32.61■■■□□ 2.81
DDR1-228ENST00000376575 TNIKQ9UKE5 1360 aa32.6■■■□□ 2.81
DDR1-228ENST00000376575 EHMT2Q96KQ7 1210 aa32.57■■■□□ 2.8
DDR1-228ENST00000376575 SAMD9Q5K651 1589 aa32.57■■■□□ 2.8
DDR1-228ENST00000376575 PTPRGP23470 1445 aa32.53■■■□□ 2.8
DDR1-228ENST00000376575 EFCAB5A4FU69 1503 aa32.46■■■□□ 2.79
DDR1-228ENST00000376575 ADCY10Q96PN6 1610 aa32.38■■■□□ 2.77
DDR1-228ENST00000376575 UHRF1BP1LA0JNW5 1464 aa32.36■■■□□ 2.77
DDR1-228ENST00000376575 P3H3Q8IVL6 736 aa32.36■■■□□ 2.77
DDR1-228ENST00000376575 ARHGAP35Q9NRY4 1499 aa32.35■■■□□ 2.77
DDR1-228ENST00000376575 UACAQ9BZF9 1416 aa32.35■■■□□ 2.77
DDR1-228ENST00000376575 RANGAP1P46060 587 aaPredicted RBP32.35■■■□□ 2.77
DDR1-228ENST00000376575 LOC105371045A0A1W2PR82 267 aa32.33■■■□□ 2.77
DDR1-228ENST00000376575 FHOD3Q2V2M9 1422 aa32.32■■■□□ 2.76
DDR1-228ENST00000376575 TTBK1Q5TCY1 1321 aaPredicted RBP32.31■■■□□ 2.76
DDR1-228ENST00000376575 ABCA8O94911 1581 aa32.3■■■□□ 2.76
DDR1-228ENST00000376575 ABCC2Q92887 1545 aa32.3■■■□□ 2.76
DDR1-228ENST00000376575 PLB1Q6P1J6 1458 aa32.29■■■□□ 2.76
DDR1-228ENST00000376575 CLIP1P30622 1438 aa32.21■■■□□ 2.75
DDR1-228ENST00000376575 KDM5BQ9UGL1 1544 aa32.2■■■□□ 2.74
DDR1-228ENST00000376575 CEP162Q5TB80 1403 aa32.15■■■□□ 2.74
DDR1-228ENST00000376575 MAPKBP1O60336 1514 aa32.15■■■□□ 2.74
DDR1-228ENST00000376575 RAPGEF6Q8TEU7 1601 aa32.15■■■□□ 2.74
DDR1-228ENST00000376575 NPM1P06748 294 aaKnown RBP eCLIP32.13■■■□□ 2.73
DDR1-228ENST00000376575 FMN1Q68DA7 1419 aa32.13■■■□□ 2.73
DDR1-228ENST00000376575 ZCCHC11Q5TAX3 1644 aaKnown RBP32.08■■■□□ 2.73
DDR1-228ENST00000376575 NUP153P49790 1475 aaKnown RBP32.06■■■□□ 2.72
DDR1-228ENST00000376575 ATP10BO94823 1461 aa32.03■■■□□ 2.72
DDR1-228ENST00000376575 ASXL2Q76L83 1435 aa31.98■■■□□ 2.71
DDR1-228ENST00000376575 CASKIN1Q8WXD9 1431 aa31.94■■■□□ 2.7
DDR1-228ENST00000376575 ABCC10Q5T3U5 1492 aa31.94■■■□□ 2.7
DDR1-228ENST00000376575 HECW1Q76N89 1606 aa31.92■■■□□ 2.7
DDR1-228ENST00000376575 PCF11O94913 1555 aaKnown RBP31.9■■■□□ 2.7
DDR1-228ENST00000376575 WDR7Q9Y4E6 1490 aa31.88■■■□□ 2.69
DDR1-228ENST00000376575 DIP2BQ9P265 1576 aa31.88■■■□□ 2.69
DDR1-228ENST00000376575 KIF13AQ9H1H9 1805 aa31.88■■■□□ 2.69
DDR1-228ENST00000376575 EPRSP07814 1512 aaKnown RBP31.87■■■□□ 2.69
DDR1-228ENST00000376575 FYCO1Q9BQS8 1478 aa31.87■■■□□ 2.69
DDR1-228ENST00000376575 ARID3CA6NKF2 412 aa31.86■■■□□ 2.69
DDR1-228ENST00000376575 TRHP20396 242 aaPredicted RBP31.86■■■□□ 2.69
DDR1-228ENST00000376575 LRRIQ1Q96JM4 1722 aa31.84■■■□□ 2.69
DDR1-228ENST00000376575 GLI2P10070 1586 aa31.81■■■□□ 2.68
DDR1-228ENST00000376575 CDK13Q14004 1512 aaKnown RBP31.81■■■□□ 2.68
DDR1-228ENST00000376575 FAM69CQ0P6D2 419 aa31.78■■■□□ 2.68
DDR1-228ENST00000376575 VPS8Q8N3P4 1428 aa31.77■■■□□ 2.68
DDR1-228ENST00000376575 CCDC18Q5T9S5 1454 aa31.76■■■□□ 2.67
DDR1-228ENST00000376575 ATP1B4Q9UN42 357 aaPredicted RBP31.75■■■□□ 2.67
DDR1-228ENST00000376575 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.74■■■□□ 2.67
DDR1-228ENST00000376575 HNRNPUL2Q1KMD3 747 aaKnown RBP31.74■■■□□ 2.67
DDR1-228ENST00000376575 PLEKHD1A6NEE1 506 aa31.71■■■□□ 2.67
DDR1-228ENST00000376575 MAP3K4Q9Y6R4 1608 aa31.66■■■□□ 2.66
DDR1-228ENST00000376575 KCNH8Q96L42 1107 aa31.65■■■□□ 2.66
DDR1-228ENST00000376575 CDK11AQ9UQ88 783 aaPredicted RBP31.64■■■□□ 2.66
DDR1-228ENST00000376575 ABCA9Q8IUA7 1624 aa31.6■■■□□ 2.65
DDR1-228ENST00000376575 TROQ12816 1431 aaPredicted RBP31.6■■■□□ 2.65
DDR1-228ENST00000376575 MAGI3Q5TCQ9 1506 aa31.59■■■□□ 2.65
DDR1-228ENST00000376575 CFAP43Q8NDM7 1665 aa31.59■■■□□ 2.65
DDR1-228ENST00000376575 PPRC1Q5VV67 1664 aaKnown RBP31.57■■■□□ 2.65
DDR1-228ENST00000376575 CD109Q6YHK3 1445 aa31.53■■■□□ 2.64
DDR1-228ENST00000376575 MAP3K1Q13233 1512 aa31.53■■■□□ 2.64
DDR1-228ENST00000376575 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.53■■■□□ 2.64
DDR1-228ENST00000376575 TSPOAP1O95153 1857 aa31.52■■■□□ 2.64
DDR1-228ENST00000376575 TIAM1Q13009 1591 aa31.49■■■□□ 2.63
DDR1-228ENST00000376575 KIF14Q15058 1648 aa31.48■■■□□ 2.63
DDR1-228ENST00000376575 TTC37Q6PGP7 1564 aa31.47■■■□□ 2.63
DDR1-228ENST00000376575 TEX14Q8IWB6 1497 aa31.43■■■□□ 2.62
DDR1-228ENST00000376575 EHBP1L1Q8N3D4 1523 aa31.4■■■□□ 2.62
DDR1-228ENST00000376575 MTUS2Q5JR59 1369 aa31.4■■■□□ 2.62
DDR1-228ENST00000376575 LRRC9Q6ZRR7 1453 aa31.37■■■□□ 2.61
DDR1-228ENST00000376575 PLCH2O75038 1416 aa31.36■■■□□ 2.61
DDR1-228ENST00000376575 ARAP3Q8WWN8 1544 aa31.35■■■□□ 2.61
DDR1-228ENST00000376575 MYO5CQ9NQX4 1742 aa31.32■■■□□ 2.6
DDR1-228ENST00000376575 KANK4Q5T7N3 995 aaPredicted RBP31.31■■■□□ 2.6
DDR1-228ENST00000376575 NEO1Q92859 1461 aa31.31■■■□□ 2.6
DDR1-228ENST00000376575 PHLDB1Q86UU1 1377 aa31.3■■■□□ 2.6
DDR1-228ENST00000376575 COL17A1Q9UMD9 1497 aaPredicted RBP31.27■■■□□ 2.6
DDR1-228ENST00000376575 APLP2Q06481 763 aa31.26■■■□□ 2.59
DDR1-228ENST00000376575 FANCAO15360 1455 aa31.26■■■□□ 2.59
DDR1-228ENST00000376575 GPATCH8Q9UKJ3 1502 aaKnown RBP31.25■■■□□ 2.59
DDR1-228ENST00000376575 CDC42BPAQ5VT25 1732 aa31.25■■■□□ 2.59
DDR1-228ENST00000376575 CDC42BPBQ9Y5S2 1711 aa31.25■■■□□ 2.59
DDR1-228ENST00000376575 PREX2Q70Z35 1606 aa31.24■■■□□ 2.59
DDR1-228ENST00000376575 SUPT6HQ7KZ85 1726 aaKnown RBP31.24■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms