RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 RAD54L2Q9Y4B4 1467 aa16.51■□□□□ 0.23
DDR1-227ENST00000376570 CCNB3Q8WWL7 1395 aa16.5■□□□□ 0.23
DDR1-227ENST00000376570 CHMP7Q8WUX9 453 aaPredicted RBP16.49■□□□□ 0.23
DDR1-227ENST00000376570 NESP48681 1621 aa16.49■□□□□ 0.23
DDR1-227ENST00000376570 KDM2AQ9Y2K7 1162 aa16.49■□□□□ 0.23
DDR1-227ENST00000376570 ANP32CO43423 234 aa16.48■□□□□ 0.23
DDR1-227ENST00000376570 SALL2Q9Y467 1007 aaPredicted RBP16.48■□□□□ 0.23
DDR1-227ENST00000376570 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.47■□□□□ 0.23
DDR1-227ENST00000376570 TONSLQ96HA7 1378 aa16.47■□□□□ 0.23
DDR1-227ENST00000376570 CADPSQ9ULU8 1353 aa16.47■□□□□ 0.23
DDR1-227ENST00000376570 EIF4G1Q04637 1599 aaKnown RBP16.45■□□□□ 0.22
DDR1-227ENST00000376570 FKBP8Q14318 412 aa16.44■□□□□ 0.22
DDR1-227ENST00000376570 FAM9BQ8IZU0 186 aa16.44■□□□□ 0.22
DDR1-227ENST00000376570 RAB3GAP2Q9H2M9 1393 aa16.43■□□□□ 0.22
DDR1-227ENST00000376570 IGF1RP08069 1367 aa16.42■□□□□ 0.22
DDR1-227ENST00000376570 ARAP1Q96P48 1450 aa16.39■□□□□ 0.21
DDR1-227ENST00000376570 HNRNPUQ00839 825 aaKnown RBP eCLIP16.38■□□□□ 0.21
DDR1-227ENST00000376570 SLC4A1APQ9BWU0 796 aaKnown RBP16.38■□□□□ 0.21
DDR1-227ENST00000376570 KIF21BO75037 1637 aa16.36■□□□□ 0.21
DDR1-227ENST00000376570 DHX57Q6P158 1386 aaKnown RBP16.35■□□□□ 0.21
DDR1-227ENST00000376570 FGD5Q6ZNL6 1462 aa16.35■□□□□ 0.21
DDR1-227ENST00000376570 RGL3Q3MIN7 710 aa16.34■□□□□ 0.21
DDR1-227ENST00000376570 FANCD2Q9BXW9 1451 aa16.33■□□□□ 0.2
DDR1-227ENST00000376570 CUX1P39880 1505 aa16.32■□□□□ 0.2
DDR1-227ENST00000376570 ERICH6Q7L0X2 663 aa16.3■□□□□ 0.2
DDR1-227ENST00000376570 PHLDB1Q86UU1 1377 aa16.29■□□□□ 0.2
DDR1-227ENST00000376570 ZNF644Q9H582 1327 aaPredicted RBP16.27■□□□□ 0.19
DDR1-227ENST00000376570 NCAPD3P42695 1498 aa16.27■□□□□ 0.19
DDR1-227ENST00000376570 CFDP1Q9UEE9 299 aaPredicted RBP16.25■□□□□ 0.19
DDR1-227ENST00000376570 CDK11AQ9UQ88 783 aaPredicted RBP16.24■□□□□ 0.19
DDR1-227ENST00000376570 ARHGAP35Q9NRY4 1499 aa16.23■□□□□ 0.19
DDR1-227ENST00000376570 SETD5Q9C0A6 1442 aa16.22■□□□□ 0.19
DDR1-227ENST00000376570 AQRO60306 1485 aaKnown RBP eCLIP16.22■□□□□ 0.191e-7■■■■■ 41.3
DDR1-227ENST00000376570 PDS5BQ9NTI5 1447 aa16.21■□□□□ 0.19
DDR1-227ENST00000376570 ERCC6Q03468 1493 aa16.2■□□□□ 0.18
DDR1-227ENST00000376570 CHGAP10645 457 aaKnown RBP16.19■□□□□ 0.18
DDR1-227ENST00000376570 CFTRP13569 1480 aa16.18■□□□□ 0.18
DDR1-227ENST00000376570 MRS2Q9HD23 443 aa16.18■□□□□ 0.18
DDR1-227ENST00000376570 PLPPR3Q6T4P5 718 aa16.18■□□□□ 0.18
DDR1-227ENST00000376570 PRXQ9BXM0 1461 aa16.16■□□□□ 0.18
DDR1-227ENST00000376570 CC2D2AQ9P2K1 1620 aa16.16■□□□□ 0.18
DDR1-227ENST00000376570 SUPT16HQ9Y5B9 1047 aaKnown RBP16.15■□□□□ 0.18
DDR1-227ENST00000376570 FHAD1B1AJZ9 1412 aa16.15■□□□□ 0.18
DDR1-227ENST00000376570 PLEKHD1A6NEE1 506 aa16.14■□□□□ 0.17
DDR1-227ENST00000376570 TSPY4P0CV99 314 aa16.14■□□□□ 0.17
DDR1-227ENST00000376570 TSPY10P0CW01 314 aa16.14■□□□□ 0.17
DDR1-227ENST00000376570 HSPA5P11021 654 aaKnown RBP16.13■□□□□ 0.17
DDR1-227ENST00000376570 EIF4G2P78344 907 aaKnown RBP eCLIP16.13■□□□□ 0.178e-8■■■■■ 39.6
DDR1-227ENST00000376570 PPP1R15AO75807 674 aaPredicted RBP16.13■□□□□ 0.17
DDR1-227ENST00000376570 TOP2BQ02880 1626 aa16.11■□□□□ 0.17
DDR1-227ENST00000376570 L3MBTL2Q969R5 705 aa16.11■□□□□ 0.17
DDR1-227ENST00000376570 BCL11AQ9H165 835 aa16.11■□□□□ 0.17
DDR1-227ENST00000376570 HNRNPMP52272 730 aaKnown RBP eCLIP16.09■□□□□ 0.17
DDR1-227ENST00000376570 MPHOSPH9Q99550 1183 aa16.09■□□□□ 0.17
DDR1-227ENST00000376570 PKD2Q13563 968 aa16.06■□□□□ 0.16
DDR1-227ENST00000376570 POLA1P09884 1462 aaPredicted RBP16.05■□□□□ 0.16
DDR1-227ENST00000376570 DCAF11Q8TEB1 546 aa16.04■□□□□ 0.16
DDR1-227ENST00000376570 GAPVD1Q14C86 1478 aa16.03■□□□□ 0.16
DDR1-227ENST00000376570 JPH4Q96JJ6 628 aa16.02■□□□□ 0.16
DDR1-227ENST00000376570 LRRC9Q6ZRR7 1453 aa16.01■□□□□ 0.15
DDR1-227ENST00000376570 TMC1Q8TDI8 760 aa16■□□□□ 0.15
DDR1-227ENST00000376570 CARD11Q9BXL7 1154 aa16■□□□□ 0.15
DDR1-227ENST00000376570 CLSPNQ9HAW4 1339 aa15.99■□□□□ 0.15
DDR1-227ENST00000376570 PEG3Q9GZU2 1588 aa15.99■□□□□ 0.15
DDR1-227ENST00000376570 TOPBP1Q92547 1522 aa15.98■□□□□ 0.15
DDR1-227ENST00000376570 FMN1Q68DA7 1419 aa15.98■□□□□ 0.15
DDR1-227ENST00000376570 NPM2Q86SE8 214 aaKnown RBP15.96■□□□□ 0.15
DDR1-227ENST00000376570 CC2D1BQ5T0F9 858 aaKnown RBP15.95■□□□□ 0.14
DDR1-227ENST00000376570 B4GALNT3Q6L9W6 998 aa15.95■□□□□ 0.14
DDR1-227ENST00000376570 TSHZ2Q9NRE2 1034 aa15.94■□□□□ 0.14
DDR1-227ENST00000376570 CCDC184Q52MB2 194 aa15.94■□□□□ 0.14
DDR1-227ENST00000376570 HMGXB3Q12766 1538 aa15.94■□□□□ 0.14
DDR1-227ENST00000376570 ANP32EQ9BTT0 268 aa15.91■□□□□ 0.14
DDR1-227ENST00000376570 TNNT2P45379 298 aaPredicted RBP15.91■□□□□ 0.14
DDR1-227ENST00000376570 FGD6Q6ZV73 1430 aa15.91■□□□□ 0.14
DDR1-227ENST00000376570 NUTM2DQ5VT03 806 aaPredicted RBP15.9■□□□□ 0.14
DDR1-227ENST00000376570 CCDC18Q5T9S5 1454 aa15.9■□□□□ 0.14
DDR1-227ENST00000376570 RRBP1Q9P2E9 1410 aaKnown RBP15.9■□□□□ 0.14
DDR1-227ENST00000376570 NUP155O75694 1391 aa15.89■□□□□ 0.13
DDR1-227ENST00000376570 ERICH3Q5RHP9 1530 aa15.88■□□□□ 0.13
DDR1-227ENST00000376570 PLEKHG5O94827 1062 aa15.86■□□□□ 0.13
DDR1-227ENST00000376570 SAFB2Q14151 953 aaKnown RBP eCLIP15.86■□□□□ 0.13
DDR1-227ENST00000376570 NBPF8Q3BBV2 869 aa15.85■□□□□ 0.13
DDR1-227ENST00000376570 NCOA2Q15596 1464 aa15.85■□□□□ 0.13
DDR1-227ENST00000376570 WDR97A6NE52 1622 aa15.85■□□□□ 0.13
DDR1-227ENST00000376570 CDK13Q14004 1512 aaKnown RBP15.85■□□□□ 0.13
DDR1-227ENST00000376570 URB2Q14146 1524 aaKnown RBP15.84■□□□□ 0.13
DDR1-227ENST00000376570 ZNF608Q9ULD9 1512 aaPredicted RBP15.83■□□□□ 0.13
DDR1-227ENST00000376570 C11orf95C9JLR9 678 aaPredicted RBP15.83■□□□□ 0.12
DDR1-227ENST00000376570 PCF11O94913 1555 aaKnown RBP15.82■□□□□ 0.12
DDR1-227ENST00000376570 NEUROD2Q15784 382 aa15.82■□□□□ 0.12
DDR1-227ENST00000376570 ST20-MTHFSA0A0A6YYL1 179 aa15.81■□□□□ 0.12
DDR1-227ENST00000376570 PRG4Q92954 1404 aaPredicted RBP15.81■□□□□ 0.12
DDR1-227ENST00000376570 TIAM1Q13009 1591 aa15.8■□□□□ 0.12
DDR1-227ENST00000376570 PTPRKQ15262 1439 aa15.8■□□□□ 0.12
DDR1-227ENST00000376570 WASHC2AQ641Q2 1341 aa15.8■□□□□ 0.12
DDR1-227ENST00000376570 CASKIN1Q8WXD9 1431 aa15.79■□□□□ 0.12
DDR1-227ENST00000376570 CCDC136Q96JN2 1154 aa15.79■□□□□ 0.12
DDR1-227ENST00000376570 GGT6Q6P531 493 aa15.78■□□□□ 0.12
DDR1-227ENST00000376570 MYOM3Q5VTT5 1437 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms