RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 KIAA0586Q9BVV6 1533 aa36.96■■■■□ 3.51
HLA-C-202ENST00000376237 CEP170Q5SW79 1584 aa36.95■■■■□ 3.51
HLA-C-202ENST00000376237 CTTNBP2Q8WZ74 1663 aa36.92■■■■□ 3.5
HLA-C-202ENST00000376237 OSCARQ8IYS5 282 aa36.87■■■■□ 3.49
HLA-C-202ENST00000376237 IQGAP2Q13576 1575 aa36.84■■■■□ 3.49
HLA-C-202ENST00000376237 CEP162Q5TB80 1403 aa36.76■■■■□ 3.48
HLA-C-202ENST00000376237 CLASP1Q7Z460 1538 aa36.74■■■■□ 3.47
HLA-C-202ENST00000376237 JPH4Q96JJ6 628 aa36.73■■■■□ 3.47
HLA-C-202ENST00000376237 CLIP1P30622 1438 aa36.71■■■■□ 3.47
HLA-C-202ENST00000376237 RANGAP1P46060 587 aaPredicted RBP36.69■■■■□ 3.46
HLA-C-202ENST00000376237 UGGT2Q9NYU1 1516 aa36.69■■■■□ 3.46
HLA-C-202ENST00000376237 EFCAB5A4FU69 1503 aa36.62■■■■□ 3.45
HLA-C-202ENST00000376237 DNAJC5Q9H3Z4 198 aa36.62■■■■□ 3.45
HLA-C-202ENST00000376237 SHROOM2Q13796 1616 aa36.59■■■■□ 3.45
HLA-C-202ENST00000376237 ARHGAP35Q9NRY4 1499 aa36.58■■■■□ 3.45
HLA-C-202ENST00000376237 CARMIL2Q6F5E8 1435 aa36.56■■■■□ 3.44
HLA-C-202ENST00000376237 SAMD9Q5K651 1589 aa36.55■■■■□ 3.44
HLA-C-202ENST00000376237 PRG4Q92954 1404 aaPredicted RBP36.53■■■■□ 3.44
HLA-C-202ENST00000376237 DISP1Q96F81 1524 aa36.52■■■■□ 3.44
HLA-C-202ENST00000376237 P3H3Q8IVL6 736 aa36.46■■■■□ 3.43
HLA-C-202ENST00000376237 KIAA0556O60303 1618 aa36.46■■■■□ 3.43
HLA-C-202ENST00000376237 ARAP1Q96P48 1450 aa36.42■■■■□ 3.42
HLA-C-202ENST00000376237 FHOD3Q2V2M9 1422 aa36.4■■■■□ 3.42
HLA-C-202ENST00000376237 FMN1Q68DA7 1419 aa36.32■■■■□ 3.4
HLA-C-202ENST00000376237 ERCC6L2Q5T890 1561 aa36.28■■■■□ 3.4
HLA-C-202ENST00000376237 VPS8Q8N3P4 1428 aa36.27■■■■□ 3.4
HLA-C-202ENST00000376237 PTPRGP23470 1445 aa36.24■■■■□ 3.39
HLA-C-202ENST00000376237 ARHGEF11O15085 1522 aa36.18■■■■□ 3.38
HLA-C-202ENST00000376237 TTBK1Q5TCY1 1321 aaPredicted RBP36.17■■■■□ 3.38
HLA-C-202ENST00000376237 CASKIN1Q8WXD9 1431 aa36.11■■■■□ 3.37
HLA-C-202ENST00000376237 FYCO1Q9BQS8 1478 aa36.06■■■■□ 3.36
HLA-C-202ENST00000376237 RIMBP3CA6NJZ7 1639 aa36.03■■■■□ 3.36
HLA-C-202ENST00000376237 RIMBP3BA6NNM3 1639 aa36.03■■■■□ 3.36
HLA-C-202ENST00000376237 RIMBP3Q9UFD9 1639 aa36.03■■■■□ 3.36
HLA-C-202ENST00000376237 PLB1Q6P1J6 1458 aa36.03■■■■□ 3.36
HLA-C-202ENST00000376237 PCF11O94913 1555 aaKnown RBP36.02■■■■□ 3.36
HLA-C-202ENST00000376237 UACAQ9BZF9 1416 aa36.02■■■■□ 3.36
HLA-C-202ENST00000376237 ABCA8O94911 1581 aa36.01■■■■□ 3.36
HLA-C-202ENST00000376237 RAPGEF6Q8TEU7 1601 aa36■■■■□ 3.35
HLA-C-202ENST00000376237 ATP1B4Q9UN42 357 aaPredicted RBP35.99■■■■□ 3.35
HLA-C-202ENST00000376237 HECW1Q76N89 1606 aa35.95■■■■□ 3.35
HLA-C-202ENST00000376237 APLP2Q06481 763 aa35.95■■■■□ 3.35
HLA-C-202ENST00000376237 UHRF1BP1LA0JNW5 1464 aa35.93■■■■□ 3.34
HLA-C-202ENST00000376237 ABCC2Q92887 1545 aa35.91■■■■□ 3.34
HLA-C-202ENST00000376237 NUP153P49790 1475 aaKnown RBP35.9■■■■□ 3.34
HLA-C-202ENST00000376237 CCDC18Q5T9S5 1454 aa35.87■■■■□ 3.33
HLA-C-202ENST00000376237 MAP3K1Q13233 1512 aa35.85■■■■□ 3.33
HLA-C-202ENST00000376237 CYB5RLQ6IPT4 315 aa35.85■■■■□ 3.33
HLA-C-202ENST00000376237 EPRSP07814 1512 aaKnown RBP35.85■■■■□ 3.33
HLA-C-202ENST00000376237 ATP10BO94823 1461 aa35.77■■■■□ 3.32
HLA-C-202ENST00000376237 ADCY10Q96PN6 1610 aa35.76■■■■□ 3.32
HLA-C-202ENST00000376237 TIAM1Q13009 1591 aa35.76■■■■□ 3.31
HLA-C-202ENST00000376237 KDM5BQ9UGL1 1544 aa35.75■■■■□ 3.31
HLA-C-202ENST00000376237 ARID3CA6NKF2 412 aa35.74■■■■□ 3.31
HLA-C-202ENST00000376237 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.73■■■■□ 3.31
HLA-C-202ENST00000376237 HNRNPUL2Q1KMD3 747 aaKnown RBP35.73■■■■□ 3.31
HLA-C-202ENST00000376237 CDK11AQ9UQ88 783 aaPredicted RBP35.73■■■■□ 3.31
HLA-C-202ENST00000376237 LRRIQ1Q96JM4 1722 aa35.72■■■■□ 3.31
HLA-C-202ENST00000376237 CDK13Q14004 1512 aaKnown RBP35.72■■■■□ 3.31
HLA-C-202ENST00000376237 CFAP43Q8NDM7 1665 aa35.7■■■■□ 3.3
HLA-C-202ENST00000376237 NPM1P06748 294 aaKnown RBP eCLIP35.69■■■■□ 3.3
HLA-C-202ENST00000376237 LRRC9Q6ZRR7 1453 aa35.62■■■■□ 3.29
HLA-C-202ENST00000376237 PLEKHD1A6NEE1 506 aa35.62■■■■□ 3.29
HLA-C-202ENST00000376237 KANK4Q5T7N3 995 aaPredicted RBP35.62■■■■□ 3.29
HLA-C-202ENST00000376237 MTUS2Q5JR59 1369 aa35.61■■■■□ 3.29
HLA-C-202ENST00000376237 ZCCHC11Q5TAX3 1644 aaKnown RBP35.61■■■■□ 3.29
HLA-C-202ENST00000376237 EHBP1L1Q8N3D4 1523 aa35.53■■■■□ 3.28
HLA-C-202ENST00000376237 TROQ12816 1431 aaPredicted RBP35.53■■■■□ 3.28
HLA-C-202ENST00000376237 PPARGC1BQ86YN6 1023 aaKnown RBP35.52■■■■□ 3.28
HLA-C-202ENST00000376237 MAGI3Q5TCQ9 1506 aa35.51■■■■□ 3.28
HLA-C-202ENST00000376237 ASXL2Q76L83 1435 aa35.44■■■■□ 3.26
HLA-C-202ENST00000376237 WDR7Q9Y4E6 1490 aa35.42■■■■□ 3.26
HLA-C-202ENST00000376237 MAPKBP1O60336 1514 aa35.4■■■■□ 3.26
HLA-C-202ENST00000376237 SUPT6HQ7KZ85 1726 aaKnown RBP35.37■■■■□ 3.25
HLA-C-202ENST00000376237 NCOA2Q15596 1464 aa35.33■■■■□ 3.25
HLA-C-202ENST00000376237 KIF14Q15058 1648 aa35.33■■■■□ 3.25
HLA-C-202ENST00000376237 KCNH8Q96L42 1107 aa35.32■■■■□ 3.24
HLA-C-202ENST00000376237 ABCC10Q5T3U5 1492 aa35.22■■■■□ 3.23
HLA-C-202ENST00000376237 PHLDB1Q86UU1 1377 aa35.21■■■■□ 3.23
HLA-C-202ENST00000376237 CCNB3Q8WWL7 1395 aa35.21■■■■□ 3.23
HLA-C-202ENST00000376237 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.19■■■■□ 3.22
HLA-C-202ENST00000376237 MYOM3Q5VTT5 1437 aa35.17■■■■□ 3.22
HLA-C-202ENST00000376237 GPATCH8Q9UKJ3 1502 aaKnown RBP35.13■■■■□ 3.21
HLA-C-202ENST00000376237 ABCA9Q8IUA7 1624 aa35.12■■■■□ 3.21
HLA-C-202ENST00000376237 TTC37Q6PGP7 1564 aa35.1■■■■□ 3.21
HLA-C-202ENST00000376237 MIA2Q96PC5 1412 aa35.1■■■■□ 3.21
HLA-C-202ENST00000376237 GLI2P10070 1586 aa35.09■■■■□ 3.21
HLA-C-202ENST00000376237 CFDP1Q9UEE9 299 aaPredicted RBP35.06■■■■□ 3.2
HLA-C-202ENST00000376237 FGD6Q6ZV73 1430 aa35.06■■■■□ 3.2
HLA-C-202ENST00000376237 ITSN2Q9NZM3 1697 aa35.06■■■■□ 3.2
HLA-C-202ENST00000376237 RRBP1Q9P2E9 1410 aaKnown RBP35.05■■■■□ 3.2
HLA-C-202ENST00000376237 PLCH2O75038 1416 aa35.05■■■■□ 3.2
HLA-C-202ENST00000376237 DIP2BQ9P265 1576 aa35.05■■■■□ 3.2
HLA-C-202ENST00000376237 FAM69CQ0P6D2 419 aa35.04■■■■□ 3.2
HLA-C-202ENST00000376237 TRIM26Q12899 539 aaPredicted RBP35.02■■■■□ 3.2
HLA-C-202ENST00000376237 CD109Q6YHK3 1445 aa35.01■■■■□ 3.19
HLA-C-202ENST00000376237 CDC42BPAQ5VT25 1732 aa35.01■■■■□ 3.19
HLA-C-202ENST00000376237 ARAP3Q8WWN8 1544 aa35.01■■■■□ 3.19
HLA-C-202ENST00000376237 MYO5CQ9NQX4 1742 aa35■■■■□ 3.19
HLA-C-202ENST00000376237 PREX2Q70Z35 1606 aa35■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms