RNA–Protein interactions for RNA: ENST00000376230.7

ZNF550-203, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 3,719 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-203ENST00000376230 RAD54L2Q9Y4B4 1467 aa14.2□□□□□ -0.14
ZNF550-203ENST00000376230 CADPSQ9ULU8 1353 aa14.2□□□□□ -0.14
ZNF550-203ENST00000376230 ANP32CO43423 234 aa14.19□□□□□ -0.14
ZNF550-203ENST00000376230 SENP3Q9H4L4 574 aaPredicted RBP14.19□□□□□ -0.14
ZNF550-203ENST00000376230 FKBP8Q14318 412 aa14.19□□□□□ -0.14
ZNF550-203ENST00000376230 TONSLQ96HA7 1378 aa14.18□□□□□ -0.14
ZNF550-203ENST00000376230 NESP48681 1621 aa14.18□□□□□ -0.14
ZNF550-203ENST00000376230 IGF1RP08069 1367 aa14.17□□□□□ -0.14
ZNF550-203ENST00000376230 CHMP7Q8WUX9 453 aaPredicted RBP14.16□□□□□ -0.14
ZNF550-203ENST00000376230 UNC13AQ9UPW8 1703 aa14.16□□□□□ -0.14
ZNF550-203ENST00000376230 RAB3GAP2Q9H2M9 1393 aa14.16□□□□□ -0.14
ZNF550-203ENST00000376230 KDM2AQ9Y2K7 1162 aa14.15□□□□□ -0.14
ZNF550-203ENST00000376230 ARAP1Q96P48 1450 aa14.14□□□□□ -0.15
ZNF550-203ENST00000376230 EIF4G1Q04637 1599 aaKnown RBP14.14□□□□□ -0.15
ZNF550-203ENST00000376230 SALL2Q9Y467 1007 aaPredicted RBP14.13□□□□□ -0.15
ZNF550-203ENST00000376230 FAM9BQ8IZU0 186 aa14.13□□□□□ -0.15
ZNF550-203ENST00000376230 KIF21BO75037 1637 aa14.13□□□□□ -0.15
ZNF550-203ENST00000376230 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.12□□□□□ -0.15
ZNF550-203ENST00000376230 DHX57Q6P158 1386 aaKnown RBP14.12□□□□□ -0.15
ZNF550-203ENST00000376230 HNRNPUQ00839 825 aaKnown RBP eCLIP14.1□□□□□ -0.15
ZNF550-203ENST00000376230 TSHZ2Q9NRE2 1034 aa14.1□□□□□ -0.15
ZNF550-203ENST00000376230 FGD5Q6ZNL6 1462 aa14.09□□□□□ -0.15
ZNF550-203ENST00000376230 CUX1P39880 1505 aa14.07□□□□□ -0.16
ZNF550-203ENST00000376230 FANCD2Q9BXW9 1451 aa14.06□□□□□ -0.16
ZNF550-203ENST00000376230 SLC4A1APQ9BWU0 796 aaKnown RBP14.06□□□□□ -0.16
ZNF550-203ENST00000376230 NCAPD3P42695 1498 aa14.05□□□□□ -0.16
ZNF550-203ENST00000376230 ERICH6Q7L0X2 663 aa14.05□□□□□ -0.16
ZNF550-203ENST00000376230 PHLDB1Q86UU1 1377 aa14.04□□□□□ -0.16
ZNF550-203ENST00000376230 RGL3Q3MIN7 710 aa14.03□□□□□ -0.16
ZNF550-203ENST00000376230 ANP32EQ9BTT0 268 aa14.02□□□□□ -0.16
ZNF550-203ENST00000376230 ARHGAP35Q9NRY4 1499 aa14.01□□□□□ -0.17
ZNF550-203ENST00000376230 SETD5Q9C0A6 1442 aa14□□□□□ -0.17
ZNF550-203ENST00000376230 ZNF644Q9H582 1327 aaPredicted RBP13.99□□□□□ -0.17
ZNF550-203ENST00000376230 CFDP1Q9UEE9 299 aaPredicted RBP13.98□□□□□ -0.17
ZNF550-203ENST00000376230 CDK11AQ9UQ88 783 aaPredicted RBP13.98□□□□□ -0.17
ZNF550-203ENST00000376230 CFTRP13569 1480 aa13.98□□□□□ -0.17
ZNF550-203ENST00000376230 PRXQ9BXM0 1461 aa13.97□□□□□ -0.17
ZNF550-203ENST00000376230 AQRO60306 1485 aaKnown RBP eCLIP13.95□□□□□ -0.18
ZNF550-203ENST00000376230 FHAD1B1AJZ9 1412 aa13.93□□□□□ -0.18
ZNF550-203ENST00000376230 PDS5BQ9NTI5 1447 aa13.93□□□□□ -0.18
ZNF550-203ENST00000376230 MRS2Q9HD23 443 aa13.93□□□□□ -0.18
ZNF550-203ENST00000376230 TOP2BQ02880 1626 aa13.91□□□□□ -0.18
ZNF550-203ENST00000376230 PPP1R15AO75807 674 aaPredicted RBP13.91□□□□□ -0.18
ZNF550-203ENST00000376230 EIF4G2P78344 907 aaKnown RBP eCLIP13.9□□□□□ -0.18
ZNF550-203ENST00000376230 ERCC6Q03468 1493 aa13.9□□□□□ -0.18
ZNF550-203ENST00000376230 CLSPNQ9HAW4 1339 aa13.9□□□□□ -0.18
ZNF550-203ENST00000376230 BCL11AQ9H165 835 aa13.9□□□□□ -0.18
ZNF550-203ENST00000376230 HSPA5P11021 654 aaKnown RBP13.89□□□□□ -0.19
ZNF550-203ENST00000376230 CC2D2AQ9P2K1 1620 aa13.89□□□□□ -0.19
ZNF550-203ENST00000376230 PLEKHD1A6NEE1 506 aa13.88□□□□□ -0.19
ZNF550-203ENST00000376230 TSPY4P0CV99 314 aa13.88□□□□□ -0.19
ZNF550-203ENST00000376230 TSPY10P0CW01 314 aa13.88□□□□□ -0.19
ZNF550-203ENST00000376230 L3MBTL2Q969R5 705 aa13.88□□□□□ -0.19
ZNF550-203ENST00000376230 RBM19Q9Y4C8 960 aaKnown RBP13.88□□□□□ -0.19
ZNF550-203ENST00000376230 CHGAP10645 457 aaKnown RBP13.87□□□□□ -0.19
ZNF550-203ENST00000376230 MPHOSPH9Q99550 1183 aa13.86□□□□□ -0.19
ZNF550-203ENST00000376230 POLA1P09884 1462 aaPredicted RBP13.83□□□□□ -0.2
ZNF550-203ENST00000376230 HNRNPMP52272 730 aaKnown RBP eCLIP13.83□□□□□ -0.2
ZNF550-203ENST00000376230 PKD2Q13563 968 aa13.81□□□□□ -0.2
ZNF550-203ENST00000376230 LRRC9Q6ZRR7 1453 aa13.81□□□□□ -0.2
ZNF550-203ENST00000376230 GAPVD1Q14C86 1478 aa13.81□□□□□ -0.2
ZNF550-203ENST00000376230 PLPPR3Q6T4P5 718 aa13.79□□□□□ -0.2
ZNF550-203ENST00000376230 DCAF11Q8TEB1 546 aa13.79□□□□□ -0.2
ZNF550-203ENST00000376230 FMN1Q68DA7 1419 aa13.78□□□□□ -0.2
ZNF550-203ENST00000376230 JPH4Q96JJ6 628 aa13.78□□□□□ -0.2
ZNF550-203ENST00000376230 PEG3Q9GZU2 1588 aa13.78□□□□□ -0.2
ZNF550-203ENST00000376230 TOPBP1Q92547 1522 aa13.78□□□□□ -0.2
ZNF550-203ENST00000376230 TMC1Q8TDI8 760 aa13.77□□□□□ -0.21
ZNF550-203ENST00000376230 CARD11Q9BXL7 1154 aa13.76□□□□□ -0.21
ZNF550-203ENST00000376230 RRBP1Q9P2E9 1410 aaKnown RBP13.74□□□□□ -0.21
ZNF550-203ENST00000376230 HMGXB3Q12766 1538 aa13.74□□□□□ -0.21
ZNF550-203ENST00000376230 ERICH3Q5RHP9 1530 aa13.73□□□□□ -0.21
ZNF550-203ENST00000376230 CCDC184Q52MB2 194 aa13.73□□□□□ -0.21
ZNF550-203ENST00000376230 B4GALNT3Q6L9W6 998 aa13.73□□□□□ -0.21
ZNF550-203ENST00000376230 FGD6Q6ZV73 1430 aa13.72□□□□□ -0.21
ZNF550-203ENST00000376230 NBR1Q14596 966 aa13.72□□□□□ -0.21
ZNF550-203ENST00000376230 CCDC18Q5T9S5 1454 aa13.71□□□□□ -0.22
ZNF550-203ENST00000376230 NPM2Q86SE8 214 aaKnown RBP13.71□□□□□ -0.22
ZNF550-203ENST00000376230 CC2D1BQ5T0F9 858 aaKnown RBP13.7□□□□□ -0.22
ZNF550-203ENST00000376230 NUP155O75694 1391 aa13.67□□□□□ -0.22
ZNF550-203ENST00000376230 WDR97A6NE52 1622 aa13.67□□□□□ -0.22
ZNF550-203ENST00000376230 NCOA2Q15596 1464 aa13.67□□□□□ -0.22
ZNF550-203ENST00000376230 NBPF8Q3BBV2 869 aa13.66□□□□□ -0.22
ZNF550-203ENST00000376230 URB2Q14146 1524 aaKnown RBP13.65□□□□□ -0.22
ZNF550-203ENST00000376230 C11orf95C9JLR9 678 aaPredicted RBP13.65□□□□□ -0.22
ZNF550-203ENST00000376230 TNNT2P45379 298 aaPredicted RBP13.64□□□□□ -0.23
ZNF550-203ENST00000376230 TIAM1Q13009 1591 aa13.64□□□□□ -0.23
ZNF550-203ENST00000376230 CDK13Q14004 1512 aaKnown RBP13.64□□□□□ -0.23
ZNF550-203ENST00000376230 PCF11O94913 1555 aaKnown RBP13.64□□□□□ -0.23
ZNF550-203ENST00000376230 PTPRKQ15262 1439 aa13.63□□□□□ -0.23
ZNF550-203ENST00000376230 WASHC2AQ641Q2 1341 aa13.63□□□□□ -0.23
ZNF550-203ENST00000376230 CASKIN1Q8WXD9 1431 aa13.63□□□□□ -0.23
ZNF550-203ENST00000376230 ZNF608Q9ULD9 1512 aaPredicted RBP13.62□□□□□ -0.23
ZNF550-203ENST00000376230 NUTM2DQ5VT03 806 aaPredicted RBP13.62□□□□□ -0.23
ZNF550-203ENST00000376230 MYOM3Q5VTT5 1437 aa13.61□□□□□ -0.23
ZNF550-203ENST00000376230 PRG4Q92954 1404 aaPredicted RBP13.61□□□□□ -0.23
ZNF550-203ENST00000376230 ST20-MTHFSA0A0A6YYL1 179 aa13.61□□□□□ -0.23
ZNF550-203ENST00000376230 MSH5O43196 834 aa13.61□□□□□ -0.23
ZNF550-203ENST00000376230 BIVM-ERCC5R4GMW8 1640 aa13.59□□□□□ -0.23
ZNF550-203ENST00000376230 CCDC136Q96JN2 1154 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms