RNA–Protein interactions for RNA: ENST00000375639.6

C6orf48-204, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 712 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-204ENST00000375639 RAPGEF2Q9Y4G8 1499 aa29.18■■■□□ 2.26
C6orf48-204ENST00000375639 ARAP1Q96P48 1450 aa29.17■■■□□ 2.26
C6orf48-204ENST00000375639 NUP160Q12769 1436 aa29.06■■■□□ 2.24
C6orf48-204ENST00000375639 EHMT2Q96KQ7 1210 aa29.06■■■□□ 2.24
C6orf48-204ENST00000375639 CEP170Q5SW79 1584 aa29.05■■■□□ 2.24
C6orf48-204ENST00000375639 AEBP2Q6ZN18 517 aaPredicted RBP29.04■■■□□ 2.24
C6orf48-204ENST00000375639 KIF21BO75037 1637 aa29.04■■■□□ 2.24
C6orf48-204ENST00000375639 CLASP1Q7Z460 1538 aa28.95■■■□□ 2.23
C6orf48-204ENST00000375639 GOLGA3Q08378 1498 aa28.95■■■□□ 2.22
C6orf48-204ENST00000375639 KIAA0586Q9BVV6 1533 aa28.93■■■□□ 2.22
C6orf48-204ENST00000375639 UBTFP17480 764 aaKnown RBP28.92■■■□□ 2.22
C6orf48-204ENST00000375639 CTTNBP2Q8WZ74 1663 aa28.85■■■□□ 2.21
C6orf48-204ENST00000375639 JPH4Q96JJ6 628 aa28.84■■■□□ 2.21
C6orf48-204ENST00000375639 IQGAP2Q13576 1575 aa28.83■■■□□ 2.21
C6orf48-204ENST00000375639 LOC105371045A0A1W2PR82 267 aa28.79■■■□□ 2.2
C6orf48-204ENST00000375639 SHROOM2Q13796 1616 aa28.75■■■□□ 2.19
C6orf48-204ENST00000375639 PRG4Q92954 1404 aaPredicted RBP28.72■■■□□ 2.19
C6orf48-204ENST00000375639 RANGAP1P46060 587 aaPredicted RBP28.72■■■□□ 2.19
C6orf48-204ENST00000375639 UGGT2Q9NYU1 1516 aa28.68■■■□□ 2.18
C6orf48-204ENST00000375639 TNIKQ9UKE5 1360 aa28.67■■■□□ 2.18
C6orf48-204ENST00000375639 ERCC6L2Q5T890 1561 aa28.64■■■□□ 2.18
C6orf48-204ENST00000375639 CARMIL2Q6F5E8 1435 aa28.63■■■□□ 2.17
C6orf48-204ENST00000375639 DISP1Q96F81 1524 aa28.59■■■□□ 2.17
C6orf48-204ENST00000375639 P3H3Q8IVL6 736 aa28.56■■■□□ 2.16
C6orf48-204ENST00000375639 KIAA0556O60303 1618 aa28.54■■■□□ 2.16
C6orf48-204ENST00000375639 TTBK1Q5TCY1 1321 aaPredicted RBP28.53■■■□□ 2.16
C6orf48-204ENST00000375639 SAMD9Q5K651 1589 aa28.5■■■□□ 2.15
C6orf48-204ENST00000375639 EFCAB5A4FU69 1503 aa28.48■■■□□ 2.15
C6orf48-204ENST00000375639 CLIP1P30622 1438 aa28.46■■■□□ 2.15
C6orf48-204ENST00000375639 PTPRGP23470 1445 aa28.45■■■□□ 2.15
C6orf48-204ENST00000375639 ARHGAP35Q9NRY4 1499 aa28.44■■■□□ 2.14
C6orf48-204ENST00000375639 CEP162Q5TB80 1403 aa28.43■■■□□ 2.14
C6orf48-204ENST00000375639 FHOD3Q2V2M9 1422 aa28.42■■■□□ 2.14
C6orf48-204ENST00000375639 UACAQ9BZF9 1416 aa28.26■■■□□ 2.11
C6orf48-204ENST00000375639 PLB1Q6P1J6 1458 aa28.25■■■□□ 2.11
C6orf48-204ENST00000375639 FMN1Q68DA7 1419 aa28.24■■■□□ 2.11
C6orf48-204ENST00000375639 ABCA8O94911 1581 aa28.19■■■□□ 2.1
C6orf48-204ENST00000375639 ABCC2Q92887 1545 aa28.18■■■□□ 2.1
C6orf48-204ENST00000375639 ADCY10Q96PN6 1610 aa28.17■■■□□ 2.1
C6orf48-204ENST00000375639 UHRF1BP1LA0JNW5 1464 aa28.16■■■□□ 2.1
C6orf48-204ENST00000375639 ATP1B4Q9UN42 357 aaPredicted RBP28.16■■■□□ 2.1
C6orf48-204ENST00000375639 RAPGEF6Q8TEU7 1601 aa28.15■■■□□ 2.1
C6orf48-204ENST00000375639 NPM1P06748 294 aaKnown RBP eCLIP28.14■■■□□ 2.1
C6orf48-204ENST00000375639 KIF13AQ9H1H9 1805 aa28.13■■■□□ 2.09
C6orf48-204ENST00000375639 ARID3CA6NKF2 412 aa28.12■■■□□ 2.09
C6orf48-204ENST00000375639 CASKIN1Q8WXD9 1431 aa28.07■■■□□ 2.08
C6orf48-204ENST00000375639 NUP153P49790 1475 aaKnown RBP28.06■■■□□ 2.08
C6orf48-204ENST00000375639 PCF11O94913 1555 aaKnown RBP28.06■■■□□ 2.08
C6orf48-204ENST00000375639 VPS8Q8N3P4 1428 aa28.05■■■□□ 2.08
C6orf48-204ENST00000375639 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.04■■■□□ 2.08
C6orf48-204ENST00000375639 HNRNPUL2Q1KMD3 747 aaKnown RBP28.04■■■□□ 2.08
C6orf48-204ENST00000375639 HECW1Q76N89 1606 aa28.03■■■□□ 2.08
C6orf48-204ENST00000375639 KDM5BQ9UGL1 1544 aa28.03■■■□□ 2.08
C6orf48-204ENST00000375639 ATP10BO94823 1461 aa28.01■■■□□ 2.07
C6orf48-204ENST00000375639 FYCO1Q9BQS8 1478 aa28.01■■■□□ 2.07
C6orf48-204ENST00000375639 ZCCHC11Q5TAX3 1644 aaKnown RBP27.99■■■□□ 2.07
C6orf48-204ENST00000375639 EPRSP07814 1512 aaKnown RBP27.96■■■□□ 2.07
C6orf48-204ENST00000375639 CDK13Q14004 1512 aaKnown RBP27.93■■■□□ 2.06
C6orf48-204ENST00000375639 ILDR1Q86SU0 546 aaPredicted RBP27.91■■■□□ 2.06
C6orf48-204ENST00000375639 LRRIQ1Q96JM4 1722 aa27.89■■■□□ 2.06
C6orf48-204ENST00000375639 CCDC18Q5T9S5 1454 aa27.89■■■□□ 2.06
C6orf48-204ENST00000375639 ASXL2Q76L83 1435 aa27.89■■■□□ 2.06
C6orf48-204ENST00000375639 MAPKBP1O60336 1514 aa27.88■■■□□ 2.05
C6orf48-204ENST00000375639 PLEKHD1A6NEE1 506 aa27.86■■■□□ 2.05
C6orf48-204ENST00000375639 KDM4FA0A1W2PPD8 638 aa27.85■■■□□ 2.05
C6orf48-204ENST00000375639 CDK11AQ9UQ88 783 aaPredicted RBP27.85■■■□□ 2.05
C6orf48-204ENST00000375639 ABCC10Q5T3U5 1492 aa27.84■■■□□ 2.05
C6orf48-204ENST00000375639 APLP2Q06481 763 aa27.83■■■□□ 2.05
C6orf48-204ENST00000375639 FAM69CQ0P6D2 419 aa27.82■■■□□ 2.04
C6orf48-204ENST00000375639 KCNH8Q96L42 1107 aa27.81■■■□□ 2.04
C6orf48-204ENST00000375639 WDR7Q9Y4E6 1490 aa27.81■■■□□ 2.04
C6orf48-204ENST00000375639 DIP2BQ9P265 1576 aa27.76■■■□□ 2.03
C6orf48-204ENST00000375639 KDM6BO15054 1643 aa27.74■■■□□ 2.03
C6orf48-204ENST00000375639 TIAM1Q13009 1591 aa27.74■■■□□ 2.03
C6orf48-204ENST00000375639 CFAP43Q8NDM7 1665 aa27.72■■■□□ 2.03
C6orf48-204ENST00000375639 TROQ12816 1431 aaPredicted RBP27.72■■■□□ 2.03
C6orf48-204ENST00000375639 MAP3K1Q13233 1512 aa27.71■■■□□ 2.03
C6orf48-204ENST00000375639 MTUS2Q5JR59 1369 aa27.71■■■□□ 2.03
C6orf48-204ENST00000375639 MAGI3Q5TCQ9 1506 aa27.7■■■□□ 2.02
C6orf48-204ENST00000375639 KANK4Q5T7N3 995 aaPredicted RBP27.66■■■□□ 2.02
C6orf48-204ENST00000375639 LRRC9Q6ZRR7 1453 aa27.64■■■□□ 2.01
C6orf48-204ENST00000375639 EHBP1L1Q8N3D4 1523 aa27.62■■■□□ 2.01
C6orf48-204ENST00000375639 GLI2P10070 1586 aa27.6■■■□□ 2.01
C6orf48-204ENST00000375639 KIF14Q15058 1648 aa27.6■■■□□ 2.01
C6orf48-204ENST00000375639 TSPOAP1O95153 1857 aa27.59■■■□□ 2.01
C6orf48-204ENST00000375639 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.56■■■□□ 2
C6orf48-204ENST00000375639 PPARGC1BQ86YN6 1023 aaKnown RBP27.55■■■□□ 2
C6orf48-204ENST00000375639 ABCA9Q8IUA7 1624 aa27.54■■■□□ 2
C6orf48-204ENST00000375639 CD109Q6YHK3 1445 aa27.53■■■□□ 2
C6orf48-204ENST00000375639 TTC37Q6PGP7 1564 aa27.52■■■□□ 2
C6orf48-204ENST00000375639 SUPT6HQ7KZ85 1726 aaKnown RBP27.5■■□□□ 1.99
C6orf48-204ENST00000375639 MAP3K4Q9Y6R4 1608 aa27.5■■□□□ 1.99
C6orf48-204ENST00000375639 NCOA2Q15596 1464 aa27.48■■□□□ 1.99
C6orf48-204ENST00000375639 CCNB3Q8WWL7 1395 aa27.46■■□□□ 1.99
C6orf48-204ENST00000375639 ADGRL1O94910 1474 aa27.43■■□□□ 1.98
C6orf48-204ENST00000375639 PLCH2O75038 1416 aa27.42■■□□□ 1.98
C6orf48-204ENST00000375639 MYO5CQ9NQX4 1742 aa27.41■■□□□ 1.98
C6orf48-204ENST00000375639 GPATCH8Q9UKJ3 1502 aaKnown RBP27.4■■□□□ 1.98
C6orf48-204ENST00000375639 TEX14Q8IWB6 1497 aa27.38■■□□□ 1.97
C6orf48-204ENST00000375639 PPRC1Q5VV67 1664 aaKnown RBP27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms