RNA–Protein interactions for RNA: ENST00000374733.1

ABCA1-201, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 923 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-201ENST00000374733 WDR97A6NE52 1622 aa20.5■□□□□ 0.87
ABCA1-201ENST00000374733 SOGA1O94964 1423 aa20.49■□□□□ 0.87
ABCA1-201ENST00000374733 SYNJ2O15056 1496 aa20.49■□□□□ 0.87
ABCA1-201ENST00000374733 ERCC6L2Q5T890 1561 aa20.46■□□□□ 0.87
ABCA1-201ENST00000374733 GRIN2BQ13224 1484 aa20.44■□□□□ 0.86
ABCA1-201ENST00000374733 KDM4FA0A1W2PPD8 638 aa20.41■□□□□ 0.86
ABCA1-201ENST00000374733 PBRM1Q86U86 1689 aa20.41■□□□□ 0.86
ABCA1-201ENST00000374733 FGD5Q6ZNL6 1462 aa20.39■□□□□ 0.85
ABCA1-201ENST00000374733 CEP170Q5SW79 1584 aa20.3■□□□□ 0.84
ABCA1-201ENST00000374733 KDM6BO15054 1643 aa20.27■□□□□ 0.84
ABCA1-201ENST00000374733 FAM69CQ0P6D2 419 aa20.22■□□□□ 0.83
ABCA1-201ENST00000374733 CUX1P39880 1505 aa20.22■□□□□ 0.83
ABCA1-201ENST00000374733 SHROOM2Q13796 1616 aa20.2■□□□□ 0.82
ABCA1-201ENST00000374733 GRIN2AQ12879 1464 aa20.2■□□□□ 0.82
ABCA1-201ENST00000374733 ABCC10Q5T3U5 1492 aa20.2■□□□□ 0.82
ABCA1-201ENST00000374733 DIP2BQ9P265 1576 aa20.18■□□□□ 0.82
ABCA1-201ENST00000374733 ABCA5Q8WWZ7 1642 aa20.18■□□□□ 0.82
ABCA1-201ENST00000374733 TSPOAP1O95153 1857 aa20.18■□□□□ 0.82
ABCA1-201ENST00000374733 HECW2Q9P2P5 1572 aa20.16■□□□□ 0.82
ABCA1-201ENST00000374733 NUP160Q12769 1436 aa20.13■□□□□ 0.81
ABCA1-201ENST00000374733 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.13■□□□□ 0.812e-10■□□□□ 9.3
ABCA1-201ENST00000374733 ADAMTS12P58397 1594 aa20.11■□□□□ 0.81
ABCA1-201ENST00000374733 MAPKBP1O60336 1514 aa20.1■□□□□ 0.81
ABCA1-201ENST00000374733 ADGRL1O94910 1474 aa20.09■□□□□ 0.81
ABCA1-201ENST00000374733 ABCA10Q8WWZ4 1543 aa20.07■□□□□ 0.8
ABCA1-201ENST00000374733 SLC4A2P04920 1241 aa20.06■□□□□ 0.8
ABCA1-201ENST00000374733 PRG4Q92954 1404 aaPredicted RBP20.04■□□□□ 0.8
ABCA1-201ENST00000374733 NPM1P06748 294 aaKnown RBP eCLIP20.02■□□□□ 0.8
ABCA1-201ENST00000374733 ADCY10Q96PN6 1610 aa20■□□□□ 0.79
ABCA1-201ENST00000374733 EHMT2Q96KQ7 1210 aa19.98■□□□□ 0.79
ABCA1-201ENST00000374733 FOXD4L1Q9NU39 408 aa19.98■□□□□ 0.79
ABCA1-201ENST00000374733 FBXO41Q8TF61 875 aa19.96■□□□□ 0.79
ABCA1-201ENST00000374733 FHAD1B1AJZ9 1412 aa19.93■□□□□ 0.78
ABCA1-201ENST00000374733 JPH4Q96JJ6 628 aa19.89■□□□□ 0.77
ABCA1-201ENST00000374733 PPRC1Q5VV67 1664 aaKnown RBP19.86■□□□□ 0.77
ABCA1-201ENST00000374733 RUSC2Q8N2Y8 1516 aa19.86■□□□□ 0.77
ABCA1-201ENST00000374733 ZBTB22O15209 634 aa19.85■□□□□ 0.77
ABCA1-201ENST00000374733 RNF39Q9H2S5 420 aa19.8■□□□□ 0.76
ABCA1-201ENST00000374733 ERICH3Q5RHP9 1530 aa19.8■□□□□ 0.76
ABCA1-201ENST00000374733 LMTK3Q96Q04 1460 aa19.79■□□□□ 0.76
ABCA1-201ENST00000374733 WRNQ14191 1432 aaPredicted RBP eCLIP19.78■□□□□ 0.76
ABCA1-201ENST00000374733 CSRNP3Q8WYN3 585 aa19.77■□□□□ 0.76
ABCA1-201ENST00000374733 U3KPZ7 1027 aaPredicted RBP19.74■□□□□ 0.75
ABCA1-201ENST00000374733 MYCNP04198 464 aaPredicted RBP19.73■□□□□ 0.75
ABCA1-201ENST00000374733 COL17A1Q9UMD9 1497 aaPredicted RBP19.73■□□□□ 0.75
ABCA1-201ENST00000374733 GLI2P10070 1586 aa19.7■□□□□ 0.74
ABCA1-201ENST00000374733 TOP2BQ02880 1626 aa19.69■□□□□ 0.74
ABCA1-201ENST00000374733 BIVM-ERCC5R4GMW8 1640 aa19.66■□□□□ 0.74
ABCA1-201ENST00000374733 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.66■□□□□ 0.74
ABCA1-201ENST00000374733 HNRNPUL2Q1KMD3 747 aaKnown RBP19.66■□□□□ 0.74
ABCA1-201ENST00000374733 ASXL2Q76L83 1435 aa19.66■□□□□ 0.74
ABCA1-201ENST00000374733 CUL7Q14999 1698 aa19.64■□□□□ 0.73
ABCA1-201ENST00000374733 PLB1Q6P1J6 1458 aa19.63■□□□□ 0.73
ABCA1-201ENST00000374733 C1QBPQ07021 282 aaKnown RBP19.63■□□□□ 0.73
ABCA1-201ENST00000374733 TTBK1Q5TCY1 1321 aaPredicted RBP19.62■□□□□ 0.73
ABCA1-201ENST00000374733 MAP3K4Q9Y6R4 1608 aa19.62■□□□□ 0.73
ABCA1-201ENST00000374733 ABCC2Q92887 1545 aa19.61■□□□□ 0.73
ABCA1-201ENST00000374733 TEX14Q8IWB6 1497 aa19.59■□□□□ 0.73
ABCA1-201ENST00000374733 PTPRGP23470 1445 aa19.57■□□□□ 0.72
ABCA1-201ENST00000374733 SOCS7O14512 581 aa19.56■□□□□ 0.72
ABCA1-201ENST00000374733 KIAA0586Q9BVV6 1533 aa19.56■□□□□ 0.72
ABCA1-201ENST00000374733 ILDR2Q71H61 639 aa19.55■□□□□ 0.72
ABCA1-201ENST00000374733 SAMD1Q6SPF0 538 aaPredicted RBP19.54■□□□□ 0.72
ABCA1-201ENST00000374733 EPRSP07814 1512 aaKnown RBP19.54■□□□□ 0.72
ABCA1-201ENST00000374733 KIF21BO75037 1637 aa19.54■□□□□ 0.72
ABCA1-201ENST00000374733 DISP3Q9P2K9 1392 aa19.49■□□□□ 0.71
ABCA1-201ENST00000374733 APLP2Q06481 763 aa19.48■□□□□ 0.71
ABCA1-201ENST00000374733 TNIKQ9UKE5 1360 aa19.44■□□□□ 0.7
ABCA1-201ENST00000374733 UHRF1BP1LA0JNW5 1464 aa19.43■□□□□ 0.7
ABCA1-201ENST00000374733 ZCCHC11Q5TAX3 1644 aaKnown RBP19.43■□□□□ 0.7
ABCA1-201ENST00000374733 PCF11O94913 1555 aaKnown RBP19.41■□□□□ 0.7
ABCA1-201ENST00000374733 CARMIL2Q6F5E8 1435 aa19.41■□□□□ 0.7
ABCA1-201ENST00000374733 PTPRMP28827 1452 aa19.41■□□□□ 0.7
ABCA1-201ENST00000374733 UACAQ9BZF9 1416 aa19.4■□□□□ 0.7
ABCA1-201ENST00000374733 KDM5BQ9UGL1 1544 aa19.37■□□□□ 0.69
ABCA1-201ENST00000374733 ADAMTSL3P82987 1691 aa19.36■□□□□ 0.69
ABCA1-201ENST00000374733 ATXN8OSP0DMR3 200 aa19.35■□□□□ 0.69
ABCA1-201ENST00000374733 SPATA31D1Q6ZQQ2 1576 aa19.32■□□□□ 0.68
ABCA1-201ENST00000374733 CFAP43Q8NDM7 1665 aa19.32■□□□□ 0.68
ABCA1-201ENST00000374733 WDR7Q9Y4E6 1490 aa19.31■□□□□ 0.68
ABCA1-201ENST00000374733 CACNB1Q02641 598 aaPredicted RBP19.31■□□□□ 0.68
ABCA1-201ENST00000374733 IQGAP2Q13576 1575 aa19.31■□□□□ 0.68
ABCA1-201ENST00000374733 MAGI3Q5TCQ9 1506 aa19.3■□□□□ 0.68
ABCA1-201ENST00000374733 CERKQ8TCT0 537 aa19.29■□□□□ 0.68
ABCA1-201ENST00000374733 CD109Q6YHK3 1445 aa19.28■□□□□ 0.68
ABCA1-201ENST00000374733 MADDQ8WXG6 1647 aa19.28■□□□□ 0.68
ABCA1-201ENST00000374733 IGF1RP08069 1367 aa19.26■□□□□ 0.67
ABCA1-201ENST00000374733 DISP1Q96F81 1524 aa19.25■□□□□ 0.67
ABCA1-201ENST00000374733 BCORL1Q5H9F3 1711 aa19.24■□□□□ 0.67
ABCA1-201ENST00000374733 HSPA2P54652 639 aa19.23■□□□□ 0.67
ABCA1-201ENST00000374733 RIMS1Q86UR5 1692 aaKnown RBP19.2■□□□□ 0.66
ABCA1-201ENST00000374733 KIF27Q86VH2 1401 aa19.18■□□□□ 0.66
ABCA1-201ENST00000374733 KCNH8Q96L42 1107 aa19.18■□□□□ 0.66
ABCA1-201ENST00000374733 ARAP3Q8WWN8 1544 aa19.16■□□□□ 0.66
ABCA1-201ENST00000374733 CAPN15O75808 1086 aa19.16■□□□□ 0.66
ABCA1-201ENST00000374733 SPINK5Q9NQ38 1064 aaPredicted RBP19.16■□□□□ 0.66
ABCA1-201ENST00000374733 KIAA0556O60303 1618 aa19.15■□□□□ 0.66
ABCA1-201ENST00000374733 CARMIL1Q5VZK9 1371 aa19.14■□□□□ 0.65
ABCA1-201ENST00000374733 ZNF219Q9P2Y4 722 aaPredicted RBP19.13■□□□□ 0.65
ABCA1-201ENST00000374733 ARID4BQ4LE39 1312 aaPredicted RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms