RNA–Protein interactions for RNA: ENST00000374601.7

TCEA3-201, Transcript of transcription elongation factor A3, humanhuman

TSL 1 (best) BASIC

Gene TCEA3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-201ENST00000374601 LOC105371045A0A1W2PR82 267 aa22.93■■□□□ 1.26
TCEA3-201ENST00000374601 CLASP1Q7Z460 1538 aa22.89■■□□□ 1.26
TCEA3-201ENST00000374601 IQGAP2Q13576 1575 aa22.88■■□□□ 1.25
TCEA3-201ENST00000374601 KIAA0586Q9BVV6 1533 aa22.86■■□□□ 1.25
TCEA3-201ENST00000374601 UBTFP17480 764 aaKnown RBP22.85■■□□□ 1.25
TCEA3-201ENST00000374601 TNIKQ9UKE5 1360 aa22.85■■□□□ 1.25
TCEA3-201ENST00000374601 SHROOM2Q13796 1616 aa22.81■■□□□ 1.24
TCEA3-201ENST00000374601 UGGT2Q9NYU1 1516 aa22.76■■□□□ 1.23
TCEA3-201ENST00000374601 OSCARQ8IYS5 282 aa22.74■■□□□ 1.23
TCEA3-201ENST00000374601 SAMD9Q5K651 1589 aa22.73■■□□□ 1.23
TCEA3-201ENST00000374601 CEP162Q5TB80 1403 aa22.71■■□□□ 1.23
TCEA3-201ENST00000374601 EFCAB5A4FU69 1503 aa22.68■■□□□ 1.22
TCEA3-201ENST00000374601 KIAA0556O60303 1618 aa22.68■■□□□ 1.22
TCEA3-201ENST00000374601 DISP1Q96F81 1524 aa22.66■■□□□ 1.22
TCEA3-201ENST00000374601 CLIP1P30622 1438 aa22.65■■□□□ 1.22
TCEA3-201ENST00000374601 ERCC6L2Q5T890 1561 aa22.64■■□□□ 1.22
TCEA3-201ENST00000374601 ARHGAP35Q9NRY4 1499 aa22.64■■□□□ 1.21
TCEA3-201ENST00000374601 JPH4Q96JJ6 628 aa22.63■■□□□ 1.21
TCEA3-201ENST00000374601 RANGAP1P46060 587 aaPredicted RBP22.62■■□□□ 1.21
TCEA3-201ENST00000374601 PRG4Q92954 1404 aaPredicted RBP22.6■■□□□ 1.21
TCEA3-201ENST00000374601 ARAP1Q96P48 1450 aa22.57■■□□□ 1.2
TCEA3-201ENST00000374601 FHOD3Q2V2M9 1422 aa22.54■■□□□ 1.2
TCEA3-201ENST00000374601 CARMIL2Q6F5E8 1435 aa22.54■■□□□ 1.2
TCEA3-201ENST00000374601 ARHGEF11O15085 1522 aa22.51■■□□□ 1.19
TCEA3-201ENST00000374601 RIMBP3CA6NJZ7 1639 aa22.5■■□□□ 1.19
TCEA3-201ENST00000374601 RIMBP3BA6NNM3 1639 aa22.5■■□□□ 1.19
TCEA3-201ENST00000374601 RIMBP3Q9UFD9 1639 aa22.5■■□□□ 1.19
TCEA3-201ENST00000374601 P3H3Q8IVL6 736 aa22.48■■□□□ 1.19
TCEA3-201ENST00000374601 PCF11O94913 1555 aaKnown RBP22.42■■□□□ 1.18
TCEA3-201ENST00000374601 FMN1Q68DA7 1419 aa22.39■■□□□ 1.17
TCEA3-201ENST00000374601 VPS8Q8N3P4 1428 aa22.39■■□□□ 1.17
TCEA3-201ENST00000374601 RAPGEF6Q8TEU7 1601 aa22.38■■□□□ 1.17
TCEA3-201ENST00000374601 ABCA8O94911 1581 aa22.38■■□□□ 1.17
TCEA3-201ENST00000374601 LRRIQ1Q96JM4 1722 aa22.37■■□□□ 1.17
TCEA3-201ENST00000374601 PTPRGP23470 1445 aa22.37■■□□□ 1.17
TCEA3-201ENST00000374601 PLB1Q6P1J6 1458 aa22.34■■□□□ 1.17
TCEA3-201ENST00000374601 TTBK1Q5TCY1 1321 aaPredicted RBP22.32■■□□□ 1.16
TCEA3-201ENST00000374601 CASKIN1Q8WXD9 1431 aa22.31■■□□□ 1.16
TCEA3-201ENST00000374601 HECW1Q76N89 1606 aa22.31■■□□□ 1.16
TCEA3-201ENST00000374601 FYCO1Q9BQS8 1478 aa22.31■■□□□ 1.16
TCEA3-201ENST00000374601 ADCY10Q96PN6 1610 aa22.3■■□□□ 1.16
TCEA3-201ENST00000374601 ABCC2Q92887 1545 aa22.29■■□□□ 1.16
TCEA3-201ENST00000374601 UACAQ9BZF9 1416 aa22.27■■□□□ 1.16
TCEA3-201ENST00000374601 NUP153P49790 1475 aaKnown RBP22.27■■□□□ 1.16
TCEA3-201ENST00000374601 UHRF1BP1LA0JNW5 1464 aa22.26■■□□□ 1.15
TCEA3-201ENST00000374601 CFAP43Q8NDM7 1665 aa22.25■■□□□ 1.15
TCEA3-201ENST00000374601 ZCCHC11Q5TAX3 1644 aaKnown RBP22.2■■□□□ 1.14
TCEA3-201ENST00000374601 EPRSP07814 1512 aaKnown RBP22.19■■□□□ 1.14
TCEA3-201ENST00000374601 CDK13Q14004 1512 aaKnown RBP22.18■■□□□ 1.14
TCEA3-201ENST00000374601 TIAM1Q13009 1591 aa22.17■■□□□ 1.14
TCEA3-201ENST00000374601 CCDC18Q5T9S5 1454 aa22.16■■□□□ 1.14
TCEA3-201ENST00000374601 KDM5BQ9UGL1 1544 aa22.15■■□□□ 1.14
TCEA3-201ENST00000374601 CYB5RLQ6IPT4 315 aa22.14■■□□□ 1.13
TCEA3-201ENST00000374601 MAP3K1Q13233 1512 aa22.14■■□□□ 1.13
TCEA3-201ENST00000374601 ATP10BO94823 1461 aa22.14■■□□□ 1.13
TCEA3-201ENST00000374601 ATP1B4Q9UN42 357 aaPredicted RBP22.11■■□□□ 1.13
TCEA3-201ENST00000374601 ARID3CA6NKF2 412 aa22.09■■□□□ 1.13
TCEA3-201ENST00000374601 MAGI3Q5TCQ9 1506 aa22.08■■□□□ 1.13
TCEA3-201ENST00000374601 LRRC9Q6ZRR7 1453 aa22.02■■□□□ 1.12
TCEA3-201ENST00000374601 EHBP1L1Q8N3D4 1523 aa22.01■■□□□ 1.11
TCEA3-201ENST00000374601 MAPKBP1O60336 1514 aa22■■□□□ 1.11
TCEA3-201ENST00000374601 APLP2Q06481 763 aa21.98■■□□□ 1.11
TCEA3-201ENST00000374601 KIF14Q15058 1648 aa21.97■■□□□ 1.11
TCEA3-201ENST00000374601 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.96■■□□□ 1.11
TCEA3-201ENST00000374601 HNRNPUL2Q1KMD3 747 aaKnown RBP21.96■■□□□ 1.11
TCEA3-201ENST00000374601 KANK4Q5T7N3 995 aaPredicted RBP21.96■■□□□ 1.11
TCEA3-201ENST00000374601 TROQ12816 1431 aaPredicted RBP21.96■■□□□ 1.11
TCEA3-201ENST00000374601 SUPT6HQ7KZ85 1726 aaKnown RBP21.95■■□□□ 1.1
TCEA3-201ENST00000374601 ASXL2Q76L83 1435 aa21.95■■□□□ 1.1
TCEA3-201ENST00000374601 WDR7Q9Y4E6 1490 aa21.94■■□□□ 1.1
TCEA3-201ENST00000374601 MTUS2Q5JR59 1369 aa21.92■■□□□ 1.1
TCEA3-201ENST00000374601 NPM1P06748 294 aaKnown RBP eCLIP21.92■■□□□ 1.1
TCEA3-201ENST00000374601 CDK11AQ9UQ88 783 aaPredicted RBP21.9■■□□□ 1.1
TCEA3-201ENST00000374601 PLEKHD1A6NEE1 506 aa21.88■■□□□ 1.09
TCEA3-201ENST00000374601 PPARGC1BQ86YN6 1023 aaKnown RBP21.88■■□□□ 1.09
TCEA3-201ENST00000374601 TTC37Q6PGP7 1564 aa21.87■■□□□ 1.09
TCEA3-201ENST00000374601 NCOA2Q15596 1464 aa21.86■■□□□ 1.09
TCEA3-201ENST00000374601 KIF13AQ9H1H9 1805 aa21.85■■□□□ 1.09
TCEA3-201ENST00000374601 CDC42BPAQ5VT25 1732 aa21.85■■□□□ 1.09
TCEA3-201ENST00000374601 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.85■■□□□ 1.09
TCEA3-201ENST00000374601 ABCA9Q8IUA7 1624 aa21.84■■□□□ 1.09
TCEA3-201ENST00000374601 ABCC10Q5T3U5 1492 aa21.84■■□□□ 1.09
TCEA3-201ENST00000374601 DIP2BQ9P265 1576 aa21.84■■□□□ 1.09
TCEA3-201ENST00000374601 MYO5CQ9NQX4 1742 aa21.83■■□□□ 1.08
TCEA3-201ENST00000374601 ITSN2Q9NZM3 1697 aa21.81■■□□□ 1.08
TCEA3-201ENST00000374601 GLI2P10070 1586 aa21.8■■□□□ 1.08
TCEA3-201ENST00000374601 PREX2Q70Z35 1606 aa21.79■■□□□ 1.08
TCEA3-201ENST00000374601 CDC42BPBQ9Y5S2 1711 aa21.78■■□□□ 1.08
TCEA3-201ENST00000374601 MAP3K4Q9Y6R4 1608 aa21.78■■□□□ 1.08
TCEA3-201ENST00000374601 KCNH8Q96L42 1107 aa21.77■■□□□ 1.08
TCEA3-201ENST00000374601 PHLDB1Q86UU1 1377 aa21.75■■□□□ 1.07
TCEA3-201ENST00000374601 GPATCH8Q9UKJ3 1502 aaKnown RBP21.72■■□□□ 1.07
TCEA3-201ENST00000374601 MYOM3Q5VTT5 1437 aa21.72■■□□□ 1.07
TCEA3-201ENST00000374601 PPRC1Q5VV67 1664 aaKnown RBP21.7■■□□□ 1.06
TCEA3-201ENST00000374601 CCNB3Q8WWL7 1395 aa21.7■■□□□ 1.06
TCEA3-201ENST00000374601 ARAP3Q8WWN8 1544 aa21.69■■□□□ 1.06
TCEA3-201ENST00000374601 TSPOAP1O95153 1857 aa21.69■■□□□ 1.06
TCEA3-201ENST00000374601 PTPN23Q9H3S7 1636 aa21.66■■□□□ 1.06
TCEA3-201ENST00000374601 FGD6Q6ZV73 1430 aa21.66■■□□□ 1.06
TCEA3-201ENST00000374601 PLCH2O75038 1416 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms