RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 URB2Q14146 1524 aaKnown RBP26.32■■□□□ 1.8
PHF1-201ENST00000374512 MAP3K1Q13233 1512 aa26.31■■□□□ 1.8
PHF1-201ENST00000374512 CCNB3Q8WWL7 1395 aa26.27■■□□□ 1.8
PHF1-201ENST00000374512 WDR97A6NE52 1622 aa26.26■■□□□ 1.79
PHF1-201ENST00000374512 DNAJC5BQ9UF47 199 aa26.25■■□□□ 1.79
PHF1-201ENST00000374512 CUL7Q14999 1698 aa26.25■■□□□ 1.79
PHF1-201ENST00000374512 YTHDC1Q96MU7 727 aaKnown RBP26.22■■□□□ 1.79
PHF1-201ENST00000374512 TIAM1Q13009 1591 aa26.22■■□□□ 1.79
PHF1-201ENST00000374512 KIF21AQ7Z4S6 1674 aa26.21■■□□□ 1.79
PHF1-201ENST00000374512 FHAD1B1AJZ9 1412 aa26.16■■□□□ 1.78
PHF1-201ENST00000374512 ABCA5Q8WWZ7 1642 aa26.14■■□□□ 1.77
PHF1-201ENST00000374512 CTTNBP2Q8WZ74 1663 aa26.1■■□□□ 1.77
PHF1-201ENST00000374512 LRRC9Q6ZRR7 1453 aa26.09■■□□□ 1.77
PHF1-201ENST00000374512 CFAP43Q8NDM7 1665 aa26.08■■□□□ 1.77
PHF1-201ENST00000374512 EFCAB5A4FU69 1503 aa26.06■■□□□ 1.76
PHF1-201ENST00000374512 GAPVD1Q14C86 1478 aa26.06■■□□□ 1.76
PHF1-201ENST00000374512 PCF11O94913 1555 aaKnown RBP26.05■■□□□ 1.76
PHF1-201ENST00000374512 TDRD9Q8NDG6 1382 aaKnown RBP26.05■■□□□ 1.76
PHF1-201ENST00000374512 TARBP1Q13395 1621 aaKnown RBP26.01■■□□□ 1.76
PHF1-201ENST00000374512 RAB3GAP2Q9H2M9 1393 aa25.99■■□□□ 1.75
PHF1-201ENST00000374512 FYCO1Q9BQS8 1478 aa25.98■■□□□ 1.75
PHF1-201ENST00000374512 FHOD3Q2V2M9 1422 aa25.97■■□□□ 1.75
PHF1-201ENST00000374512 P3H3Q8IVL6 736 aa25.96■■□□□ 1.75
PHF1-201ENST00000374512 SETD5Q9C0A6 1442 aa25.96■■□□□ 1.75
PHF1-201ENST00000374512 ITGAEP38570 1179 aa25.96■■□□□ 1.75
PHF1-201ENST00000374512 AQRO60306 1485 aaKnown RBP eCLIP25.96■■□□□ 1.758e-8■■■□□ 18.9
PHF1-201ENST00000374512 PHLDB1Q86UU1 1377 aa25.95■■□□□ 1.74
PHF1-201ENST00000374512 MAPKBP1O60336 1514 aa25.94■■□□□ 1.74
PHF1-201ENST00000374512 MRC2Q9UBG0 1479 aa25.94■■□□□ 1.74
PHF1-201ENST00000374512 CASKIN1Q8WXD9 1431 aa25.93■■□□□ 1.74
PHF1-201ENST00000374512 MYT1Q01538 1121 aa25.92■■□□□ 1.74
PHF1-201ENST00000374512 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.87■■□□□ 1.732e-15■■■□□ 18.3
PHF1-201ENST00000374512 FMN1Q68DA7 1419 aa25.87■■□□□ 1.73
PHF1-201ENST00000374512 ATP1B4Q9UN42 357 aaPredicted RBP25.87■■□□□ 1.73
PHF1-201ENST00000374512 PBRM1Q86U86 1689 aa25.87■■□□□ 1.73
PHF1-201ENST00000374512 TIMELESSQ9UNS1 1208 aa25.86■■□□□ 1.73
PHF1-201ENST00000374512 SAMD9Q5K651 1589 aa25.84■■□□□ 1.73
PHF1-201ENST00000374512 FAM50AQ14320 339 aaKnown RBP25.81■■□□□ 1.72
PHF1-201ENST00000374512 SNAPC4Q5SXM2 1469 aa25.79■■□□□ 1.72
PHF1-201ENST00000374512 WDR62O43379 1518 aa25.77■■□□□ 1.72
PHF1-201ENST00000374512 ADAMTS12P58397 1594 aa25.74■■□□□ 1.71
PHF1-201ENST00000374512 IFT140Q96RY7 1462 aa25.74■■□□□ 1.71
PHF1-201ENST00000374512 GRIN2BQ13224 1484 aa25.72■■□□□ 1.71
PHF1-201ENST00000374512 THOC2Q8NI27 1593 aaKnown RBP25.69■■□□□ 1.7
PHF1-201ENST00000374512 MTUS2Q5JR59 1369 aa25.66■■□□□ 1.7
PHF1-201ENST00000374512 FGD6Q6ZV73 1430 aa25.66■■□□□ 1.7
PHF1-201ENST00000374512 LRRIQ1Q96JM4 1722 aa25.66■■□□□ 1.7
PHF1-201ENST00000374512 IQGAP2Q13576 1575 aa25.64■■□□□ 1.69
PHF1-201ENST00000374512 SUPT16HQ9Y5B9 1047 aaKnown RBP25.64■■□□□ 1.69
PHF1-201ENST00000374512 ZNF608Q9ULD9 1512 aaPredicted RBP25.62■■□□□ 1.69
PHF1-201ENST00000374512 ERCC6Q03468 1493 aa25.58■■□□□ 1.69
PHF1-201ENST00000374512 SIN3AQ96ST3 1273 aa25.57■■□□□ 1.68
PHF1-201ENST00000374512 SUPT6HQ7KZ85 1726 aaKnown RBP25.57■■□□□ 1.68
PHF1-201ENST00000374512 EHBP1L1Q8N3D4 1523 aa25.57■■□□□ 1.68
PHF1-201ENST00000374512 NCOA2Q15596 1464 aa25.55■■□□□ 1.68
PHF1-201ENST00000374512 PPP1R15AO75807 674 aaPredicted RBP25.55■■□□□ 1.68
PHF1-201ENST00000374512 MYOM3Q5VTT5 1437 aa25.54■■□□□ 1.68
PHF1-201ENST00000374512 EIF4G3O43432 1585 aaKnown RBP25.53■■□□□ 1.68
PHF1-201ENST00000374512 CCDC18Q5T9S5 1454 aa25.52■■□□□ 1.68
PHF1-201ENST00000374512 HFM1A2PYH4 1435 aa25.52■■□□□ 1.68
PHF1-201ENST00000374512 UGGT2Q9NYU1 1516 aa25.51■■□□□ 1.67
PHF1-201ENST00000374512 HECW1Q76N89 1606 aa25.49■■□□□ 1.67
PHF1-201ENST00000374512 UACAQ9BZF9 1416 aa25.49■■□□□ 1.67
PHF1-201ENST00000374512 DDX10Q13206 875 aaKnown RBP25.46■■□□□ 1.67
PHF1-201ENST00000374512 ARHGEF11O15085 1522 aa25.46■■□□□ 1.67
PHF1-201ENST00000374512 PTPN23Q9H3S7 1636 aa25.46■■□□□ 1.67
PHF1-201ENST00000374512 KIAA0586Q9BVV6 1533 aa25.45■■□□□ 1.67
PHF1-201ENST00000374512 CCER2I3L3R5 266 aa25.45■■□□□ 1.66
PHF1-201ENST00000374512 PTPRKQ15262 1439 aa25.45■■□□□ 1.66
PHF1-201ENST00000374512 GRIN2AQ12879 1464 aa25.43■■□□□ 1.66
PHF1-201ENST00000374512 MAGI3Q5TCQ9 1506 aa25.42■■□□□ 1.66
PHF1-201ENST00000374512 TONSLQ96HA7 1378 aa25.41■■□□□ 1.66
PHF1-201ENST00000374512 MAGI1Q96QZ7 1491 aaPredicted RBP25.41■■□□□ 1.66
PHF1-201ENST00000374512 KCNH8Q96L42 1107 aa25.39■■□□□ 1.66
PHF1-201ENST00000374512 EPRSP07814 1512 aaKnown RBP25.38■■□□□ 1.65
PHF1-201ENST00000374512 NAIPQ13075 1403 aa25.38■■□□□ 1.65
PHF1-201ENST00000374512 KIAA0556O60303 1618 aa25.37■■□□□ 1.65
PHF1-201ENST00000374512 TCOF1Q13428 1488 aaKnown RBP25.36■■□□□ 1.65
PHF1-201ENST00000374512 DISP1Q96F81 1524 aa25.34■■□□□ 1.65
PHF1-201ENST00000374512 ANP32CO43423 234 aa25.34■■□□□ 1.65
PHF1-201ENST00000374512 SYNJ2O15056 1496 aa25.33■■□□□ 1.64
PHF1-201ENST00000374512 CDK13Q14004 1512 aaKnown RBP25.29■■□□□ 1.64
PHF1-201ENST00000374512 AKNAQ7Z591 1439 aa25.28■■□□□ 1.64
PHF1-201ENST00000374512 GCC2Q8IWJ2 1684 aa25.28■■□□□ 1.64
PHF1-201ENST00000374512 MIA2Q96PC5 1412 aa25.27■■□□□ 1.64
PHF1-201ENST00000374512 CHMP7Q8WUX9 453 aaPredicted RBP25.27■■□□□ 1.64
PHF1-201ENST00000374512 CEP170Q5SW79 1584 aa25.26■■□□□ 1.63
PHF1-201ENST00000374512 RAPGEF6Q8TEU7 1601 aa25.22■■□□□ 1.63
PHF1-201ENST00000374512 TSHZ2Q9NRE2 1034 aa25.22■■□□□ 1.63
PHF1-201ENST00000374512 KDM5BQ9UGL1 1544 aa25.21■■□□□ 1.63
PHF1-201ENST00000374512 NUP160Q12769 1436 aa25.19■■□□□ 1.62
PHF1-201ENST00000374512 NUP153P49790 1475 aaKnown RBP25.18■■□□□ 1.62
PHF1-201ENST00000374512 HIRIP3Q9BW71 556 aaPredicted RBP25.17■■□□□ 1.62
PHF1-201ENST00000374512 RRP7BPQ9NSQ0 103 aa25.17■■□□□ 1.62
PHF1-201ENST00000374512 NEFLP07196 543 aa25.15■■□□□ 1.62
PHF1-201ENST00000374512 CHIC2Q9UKJ5 165 aa25.15■■□□□ 1.62
PHF1-201ENST00000374512 FBLN2P98095 1184 aa25.14■■□□□ 1.61
PHF1-201ENST00000374512 FKBP8Q14318 412 aa25.14■■□□□ 1.61
PHF1-201ENST00000374512 ARID3CA6NKF2 412 aa25.13■■□□□ 1.61
PHF1-201ENST00000374512 CARMIL2Q6F5E8 1435 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms