RNA–Protein interactions for RNA: ENST00000374459.5

RASGEF1A-202, Transcript of RasGEF domain family member 1A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RASGEF1A, Length 3,264 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1A-202ENST00000374459 APLP2Q06481 763 aa21.44■■□□□ 1.02
RASGEF1A-202ENST00000374459 RANGAP1P46060 587 aaPredicted RBP21.41■■□□□ 1.02
RASGEF1A-202ENST00000374459 TARBP1Q13395 1621 aaKnown RBP21.38■■□□□ 1.01
RASGEF1A-202ENST00000374459 YTHDC1Q96MU7 727 aaKnown RBP21.35■■□□□ 1.01
RASGEF1A-202ENST00000374459 MIER1Q8N108 512 aa21.33■■□□□ 1.01
RASGEF1A-202ENST00000374459 CTTNBP2Q8WZ74 1663 aa21.33■■□□□ 1
RASGEF1A-202ENST00000374459 MRC2Q9UBG0 1479 aa21.26■□□□□ 0.99
RASGEF1A-202ENST00000374459 GAPVD1Q14C86 1478 aa21.25■□□□□ 0.99
RASGEF1A-202ENST00000374459 PBRM1Q86U86 1689 aa21.23■□□□□ 0.99
RASGEF1A-202ENST00000374459 TDRD9Q8NDG6 1382 aaKnown RBP21.22■□□□□ 0.99
RASGEF1A-202ENST00000374459 MAP3K1Q13233 1512 aa21.21■□□□□ 0.99
RASGEF1A-202ENST00000374459 WDR62O43379 1518 aa21.2■□□□□ 0.98
RASGEF1A-202ENST00000374459 EFCAB5A4FU69 1503 aa21.2■□□□□ 0.98
RASGEF1A-202ENST00000374459 KANK4Q5T7N3 995 aaPredicted RBP21.18■□□□□ 0.98
RASGEF1A-202ENST00000374459 DHX57Q6P158 1386 aaKnown RBP21.18■□□□□ 0.98
RASGEF1A-202ENST00000374459 TIAM1Q13009 1591 aa21.17■□□□□ 0.98
RASGEF1A-202ENST00000374459 CFAP43Q8NDM7 1665 aa21.16■□□□□ 0.98
RASGEF1A-202ENST00000374459 CLSPNQ9HAW4 1339 aa21.15■□□□□ 0.98
RASGEF1A-202ENST00000374459 PCF11O94913 1555 aaKnown RBP21.14■□□□□ 0.98
RASGEF1A-202ENST00000374459 SAMD9Q5K651 1589 aa21.13■□□□□ 0.97
RASGEF1A-202ENST00000374459 RRBP1Q9P2E9 1410 aaKnown RBP21.11■□□□□ 0.97
RASGEF1A-202ENST00000374459 ADAMTS12P58397 1594 aa21.1■□□□□ 0.97
RASGEF1A-202ENST00000374459 FHAD1B1AJZ9 1412 aa21.09■□□□□ 0.97
RASGEF1A-202ENST00000374459 THOC2Q8NI27 1593 aaKnown RBP21.08■□□□□ 0.96
RASGEF1A-202ENST00000374459 AQRO60306 1485 aaKnown RBP eCLIP21.08■□□□□ 0.966e-7■■■■□ 21.4
RASGEF1A-202ENST00000374459 FHOD3Q2V2M9 1422 aa21.06■□□□□ 0.96
RASGEF1A-202ENST00000374459 IFT140Q96RY7 1462 aa21.06■□□□□ 0.96
RASGEF1A-202ENST00000374459 FYCO1Q9BQS8 1478 aa21.05■□□□□ 0.96
RASGEF1A-202ENST00000374459 LRRC9Q6ZRR7 1453 aa21.03■□□□□ 0.96
RASGEF1A-202ENST00000374459 CASKIN1Q8WXD9 1431 aa21.02■□□□□ 0.96
RASGEF1A-202ENST00000374459 SNAPC4Q5SXM2 1469 aa21.02■□□□□ 0.95
RASGEF1A-202ENST00000374459 LRRIQ1Q96JM4 1722 aa21.01■□□□□ 0.95
RASGEF1A-202ENST00000374459 ZNF608Q9ULD9 1512 aaPredicted RBP21.01■□□□□ 0.95
RASGEF1A-202ENST00000374459 GRIN2BQ13224 1484 aa21.01■□□□□ 0.95
RASGEF1A-202ENST00000374459 CCNB3Q8WWL7 1395 aa20.98■□□□□ 0.95
RASGEF1A-202ENST00000374459 EIF4G3O43432 1585 aaKnown RBP20.96■□□□□ 0.95
RASGEF1A-202ENST00000374459 P3H3Q8IVL6 736 aa20.95■□□□□ 0.94
RASGEF1A-202ENST00000374459 FMN1Q68DA7 1419 aa20.94■□□□□ 0.94
RASGEF1A-202ENST00000374459 IQGAP2Q13576 1575 aa20.92■□□□□ 0.94
RASGEF1A-202ENST00000374459 ERCC6Q03468 1493 aa20.9■□□□□ 0.94
RASGEF1A-202ENST00000374459 ITGAEP38570 1179 aa20.9■□□□□ 0.94
RASGEF1A-202ENST00000374459 PHLDB1Q86UU1 1377 aa20.88■□□□□ 0.93
RASGEF1A-202ENST00000374459 BCL11AQ9H165 835 aa20.85■□□□□ 0.93
RASGEF1A-202ENST00000374459 UGGT2Q9NYU1 1516 aa20.85■□□□□ 0.93
RASGEF1A-202ENST00000374459 RAB3GAP2Q9H2M9 1393 aa20.83■□□□□ 0.93
RASGEF1A-202ENST00000374459 MAPKBP1O60336 1514 aa20.81■□□□□ 0.92
RASGEF1A-202ENST00000374459 GRIN2AQ12879 1464 aa20.79■□□□□ 0.92
RASGEF1A-202ENST00000374459 MAGI1Q96QZ7 1491 aaPredicted RBP20.78■□□□□ 0.92
RASGEF1A-202ENST00000374459 KIAA0586Q9BVV6 1533 aa20.77■□□□□ 0.91
RASGEF1A-202ENST00000374459 KIAA0556O60303 1618 aa20.74■□□□□ 0.91
RASGEF1A-202ENST00000374459 HECW1Q76N89 1606 aa20.74■□□□□ 0.91
RASGEF1A-202ENST00000374459 MAGI3Q5TCQ9 1506 aa20.74■□□□□ 0.91
RASGEF1A-202ENST00000374459 DISP1Q96F81 1524 aa20.74■□□□□ 0.91
RASGEF1A-202ENST00000374459 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.74■□□□□ 0.91
RASGEF1A-202ENST00000374459 SUPT16HQ9Y5B9 1047 aaKnown RBP20.73■□□□□ 0.91
RASGEF1A-202ENST00000374459 ARHGEF11O15085 1522 aa20.73■□□□□ 0.91
RASGEF1A-202ENST00000374459 SETD5Q9C0A6 1442 aa20.73■□□□□ 0.91
RASGEF1A-202ENST00000374459 CEP170Q5SW79 1584 aa20.72■□□□□ 0.91
RASGEF1A-202ENST00000374459 EHBP1L1Q8N3D4 1523 aa20.72■□□□□ 0.91
RASGEF1A-202ENST00000374459 ANP32EQ9BTT0 268 aa20.72■□□□□ 0.91
RASGEF1A-202ENST00000374459 SYNJ2O15056 1496 aa20.71■□□□□ 0.91
RASGEF1A-202ENST00000374459 CCDC18Q5T9S5 1454 aa20.71■□□□□ 0.91
RASGEF1A-202ENST00000374459 SUPT6HQ7KZ85 1726 aaKnown RBP20.7■□□□□ 0.9
RASGEF1A-202ENST00000374459 ATP1B4Q9UN42 357 aaPredicted RBP20.68■□□□□ 0.9
RASGEF1A-202ENST00000374459 FGD6Q6ZV73 1430 aa20.67■□□□□ 0.9
RASGEF1A-202ENST00000374459 NCOA2Q15596 1464 aa20.66■□□□□ 0.9
RASGEF1A-202ENST00000374459 EPRSP07814 1512 aaKnown RBP20.66■□□□□ 0.9
RASGEF1A-202ENST00000374459 FAM50AQ14320 339 aaKnown RBP20.65■□□□□ 0.9
RASGEF1A-202ENST00000374459 NUP160Q12769 1436 aa20.64■□□□□ 0.89
RASGEF1A-202ENST00000374459 MTUS2Q5JR59 1369 aa20.63■□□□□ 0.89
RASGEF1A-202ENST00000374459 KCNH8Q96L42 1107 aa20.62■□□□□ 0.89
RASGEF1A-202ENST00000374459 SIN3AQ96ST3 1273 aa20.61■□□□□ 0.89
RASGEF1A-202ENST00000374459 MYOM3Q5VTT5 1437 aa20.6■□□□□ 0.89
RASGEF1A-202ENST00000374459 CDK13Q14004 1512 aaKnown RBP20.6■□□□□ 0.89
RASGEF1A-202ENST00000374459 RAPGEF6Q8TEU7 1601 aa20.59■□□□□ 0.89
RASGEF1A-202ENST00000374459 PTPN23Q9H3S7 1636 aa20.56■□□□□ 0.88
RASGEF1A-202ENST00000374459 NUP153P49790 1475 aaKnown RBP20.55■□□□□ 0.88
RASGEF1A-202ENST00000374459 TCOF1Q13428 1488 aaKnown RBP20.54■□□□□ 0.88
RASGEF1A-202ENST00000374459 PTPRKQ15262 1439 aa20.54■□□□□ 0.88
RASGEF1A-202ENST00000374459 DDX10Q13206 875 aaKnown RBP20.53■□□□□ 0.88
RASGEF1A-202ENST00000374459 CHMP7Q8WUX9 453 aaPredicted RBP20.51■□□□□ 0.87
RASGEF1A-202ENST00000374459 TIMELESSQ9UNS1 1208 aa20.48■□□□□ 0.87
RASGEF1A-202ENST00000374459 HFM1A2PYH4 1435 aa20.46■□□□□ 0.87
RASGEF1A-202ENST00000374459 PPP1R15AO75807 674 aaPredicted RBP20.45■□□□□ 0.86
RASGEF1A-202ENST00000374459 CHD1O14646 1710 aa20.45■□□□□ 0.86
RASGEF1A-202ENST00000374459 TSHZ2Q9NRE2 1034 aa20.44■□□□□ 0.86
RASGEF1A-202ENST00000374459 MIA2Q96PC5 1412 aa20.43■□□□□ 0.86
RASGEF1A-202ENST00000374459 GCC2Q8IWJ2 1684 aa20.43■□□□□ 0.86
RASGEF1A-202ENST00000374459 HIRIP3Q9BW71 556 aaPredicted RBP20.42■□□□□ 0.86
RASGEF1A-202ENST00000374459 ADCY10Q96PN6 1610 aa20.42■□□□□ 0.86
RASGEF1A-202ENST00000374459 ABCA8O94911 1581 aa20.42■□□□□ 0.86
RASGEF1A-202ENST00000374459 PLB1Q6P1J6 1458 aa20.41■□□□□ 0.86
RASGEF1A-202ENST00000374459 NAIPQ13075 1403 aa20.4■□□□□ 0.86
RASGEF1A-202ENST00000374459 JPH4Q96JJ6 628 aa20.39■□□□□ 0.86
RASGEF1A-202ENST00000374459 CARMIL2Q6F5E8 1435 aa20.39■□□□□ 0.85
RASGEF1A-202ENST00000374459 FBLN2P98095 1184 aa20.37■□□□□ 0.85
RASGEF1A-202ENST00000374459 SHROOM2Q13796 1616 aa20.37■□□□□ 0.85
RASGEF1A-202ENST00000374459 BCANQ96GW7 911 aa20.36■□□□□ 0.85
RASGEF1A-202ENST00000374459 AKNAQ7Z591 1439 aa20.36■□□□□ 0.85
RASGEF1A-202ENST00000374459 TONSLQ96HA7 1378 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms