RNA–Protein interactions for RNA: ENST00000374454.1

PDZD11-202, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PDZD11, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-202ENST00000374454 JPH4Q96JJ6 628 aa16.27■□□□□ 0.2
PDZD11-202ENST00000374454 GOLGA3Q08378 1498 aa16.26■□□□□ 0.19
PDZD11-202ENST00000374454 UBTFP17480 764 aaKnown RBP16.22■□□□□ 0.19
PDZD11-202ENST00000374454 IQGAP2Q13576 1575 aa16.2■□□□□ 0.18
PDZD11-202ENST00000374454 SHROOM2Q13796 1616 aa16.19■□□□□ 0.18
PDZD11-202ENST00000374454 EHMT2Q96KQ7 1210 aa16.17■□□□□ 0.18
PDZD11-202ENST00000374454 UGGT2Q9NYU1 1516 aa16.16■□□□□ 0.18
PDZD11-202ENST00000374454 PRG4Q92954 1404 aaPredicted RBP16.16■□□□□ 0.18
PDZD11-202ENST00000374454 CTTNBP2Q8WZ74 1663 aa16.15■□□□□ 0.18
PDZD11-202ENST00000374454 ARHGEF11O15085 1522 aa16.14■□□□□ 0.18
PDZD11-202ENST00000374454 TNIKQ9UKE5 1360 aa16.13■□□□□ 0.17
PDZD11-202ENST00000374454 CARMIL2Q6F5E8 1435 aa16.12■□□□□ 0.17
PDZD11-202ENST00000374454 LOC105371045A0A1W2PR82 267 aa16.12■□□□□ 0.17
PDZD11-202ENST00000374454 DISP1Q96F81 1524 aa16.09■□□□□ 0.17
PDZD11-202ENST00000374454 RIMBP3CA6NJZ7 1639 aa16.09■□□□□ 0.17
PDZD11-202ENST00000374454 RIMBP3BA6NNM3 1639 aa16.09■□□□□ 0.17
PDZD11-202ENST00000374454 RIMBP3Q9UFD9 1639 aa16.09■□□□□ 0.17
PDZD11-202ENST00000374454 ERCC6L2Q5T890 1561 aa16.09■□□□□ 0.17
PDZD11-202ENST00000374454 ARAP1Q96P48 1450 aa16.04■□□□□ 0.16
PDZD11-202ENST00000374454 RANGAP1P46060 587 aaPredicted RBP16.03■□□□□ 0.16
PDZD11-202ENST00000374454 CYB5RLQ6IPT4 315 aa16.03■□□□□ 0.16
PDZD11-202ENST00000374454 KIAA0556O60303 1618 aa16.03■□□□□ 0.16
PDZD11-202ENST00000374454 SAMD9Q5K651 1589 aa16.03■□□□□ 0.16
PDZD11-202ENST00000374454 PTPRGP23470 1445 aa16.02■□□□□ 0.16
PDZD11-202ENST00000374454 EFCAB5A4FU69 1503 aa16.02■□□□□ 0.15
PDZD11-202ENST00000374454 P3H3Q8IVL6 736 aa16■□□□□ 0.15
PDZD11-202ENST00000374454 ARHGAP35Q9NRY4 1499 aa15.98■□□□□ 0.15
PDZD11-202ENST00000374454 CLIP1P30622 1438 aa15.97■□□□□ 0.15
PDZD11-202ENST00000374454 CEP162Q5TB80 1403 aa15.95■□□□□ 0.14
PDZD11-202ENST00000374454 FHOD3Q2V2M9 1422 aa15.94■□□□□ 0.14
PDZD11-202ENST00000374454 TTBK1Q5TCY1 1321 aaPredicted RBP15.94■□□□□ 0.14
PDZD11-202ENST00000374454 UACAQ9BZF9 1416 aa15.93■□□□□ 0.14
PDZD11-202ENST00000374454 UHRF1BP1LA0JNW5 1464 aa15.91■□□□□ 0.14
PDZD11-202ENST00000374454 FMN1Q68DA7 1419 aa15.9■□□□□ 0.14
PDZD11-202ENST00000374454 ABCA8O94911 1581 aa15.87■□□□□ 0.13
PDZD11-202ENST00000374454 PLB1Q6P1J6 1458 aa15.87■□□□□ 0.13
PDZD11-202ENST00000374454 ABCC2Q92887 1545 aa15.85■□□□□ 0.13
PDZD11-202ENST00000374454 NPM1P06748 294 aaKnown RBP eCLIP15.85■□□□□ 0.13
PDZD11-202ENST00000374454 ADCY10Q96PN6 1610 aa15.83■□□□□ 0.13
PDZD11-202ENST00000374454 KDM5BQ9UGL1 1544 aa15.81■□□□□ 0.12
PDZD11-202ENST00000374454 RAPGEF6Q8TEU7 1601 aa15.8■□□□□ 0.12
PDZD11-202ENST00000374454 CASKIN1Q8WXD9 1431 aa15.8■□□□□ 0.12
PDZD11-202ENST00000374454 NUP153P49790 1475 aaKnown RBP15.78■□□□□ 0.12
PDZD11-202ENST00000374454 ATP10BO94823 1461 aa15.78■□□□□ 0.12
PDZD11-202ENST00000374454 VPS8Q8N3P4 1428 aa15.76■□□□□ 0.11
PDZD11-202ENST00000374454 ATP1B4Q9UN42 357 aaPredicted RBP15.75■□□□□ 0.11
PDZD11-202ENST00000374454 FYCO1Q9BQS8 1478 aa15.75■□□□□ 0.11
PDZD11-202ENST00000374454 MAPKBP1O60336 1514 aa15.73■□□□□ 0.11
PDZD11-202ENST00000374454 HECW1Q76N89 1606 aa15.72■□□□□ 0.11
PDZD11-202ENST00000374454 ARID3CA6NKF2 412 aa15.72■□□□□ 0.11
PDZD11-202ENST00000374454 EPRSP07814 1512 aaKnown RBP15.72■□□□□ 0.11
PDZD11-202ENST00000374454 ZCCHC11Q5TAX3 1644 aaKnown RBP15.72■□□□□ 0.11
PDZD11-202ENST00000374454 PCF11O94913 1555 aaKnown RBP15.71■□□□□ 0.11
PDZD11-202ENST00000374454 ASXL2Q76L83 1435 aa15.7■□□□□ 0.1
PDZD11-202ENST00000374454 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.7■□□□□ 0.1
PDZD11-202ENST00000374454 HNRNPUL2Q1KMD3 747 aaKnown RBP15.7■□□□□ 0.1
PDZD11-202ENST00000374454 CDK11AQ9UQ88 783 aaPredicted RBP15.7■□□□□ 0.1
PDZD11-202ENST00000374454 PLEKHD1A6NEE1 506 aa15.69■□□□□ 0.1
PDZD11-202ENST00000374454 CCDC18Q5T9S5 1454 aa15.69■□□□□ 0.1
PDZD11-202ENST00000374454 CDK13Q14004 1512 aaKnown RBP15.66■□□□□ 0.1
PDZD11-202ENST00000374454 WDR7Q9Y4E6 1490 aa15.65■□□□□ 0.1
PDZD11-202ENST00000374454 ABCC10Q5T3U5 1492 aa15.64■□□□□ 0.09
PDZD11-202ENST00000374454 MAP3K1Q13233 1512 aa15.63■□□□□ 0.09
PDZD11-202ENST00000374454 LRRIQ1Q96JM4 1722 aa15.61■□□□□ 0.09
PDZD11-202ENST00000374454 FAM69CQ0P6D2 419 aa15.61■□□□□ 0.09
PDZD11-202ENST00000374454 KCNH8Q96L42 1107 aa15.61■□□□□ 0.09
PDZD11-202ENST00000374454 TROQ12816 1431 aaPredicted RBP15.6■□□□□ 0.09
PDZD11-202ENST00000374454 APLP2Q06481 763 aa15.6■□□□□ 0.09
PDZD11-202ENST00000374454 TRHP20396 242 aaPredicted RBP15.59■□□□□ 0.09
PDZD11-202ENST00000374454 GLI2P10070 1586 aa15.58■□□□□ 0.09
PDZD11-202ENST00000374454 TIAM1Q13009 1591 aa15.57■□□□□ 0.08
PDZD11-202ENST00000374454 DIP2BQ9P265 1576 aa15.57■□□□□ 0.08
PDZD11-202ENST00000374454 MAGI3Q5TCQ9 1506 aa15.55■□□□□ 0.08
PDZD11-202ENST00000374454 MTUS2Q5JR59 1369 aa15.55■□□□□ 0.08
PDZD11-202ENST00000374454 LRRC9Q6ZRR7 1453 aa15.53■□□□□ 0.08
PDZD11-202ENST00000374454 KANK4Q5T7N3 995 aaPredicted RBP15.53■□□□□ 0.08
PDZD11-202ENST00000374454 CFAP43Q8NDM7 1665 aa15.53■□□□□ 0.08
PDZD11-202ENST00000374454 EHBP1L1Q8N3D4 1523 aa15.51■□□□□ 0.07
PDZD11-202ENST00000374454 CD109Q6YHK3 1445 aa15.51■□□□□ 0.07
PDZD11-202ENST00000374454 KIF13AQ9H1H9 1805 aa15.5■□□□□ 0.07
PDZD11-202ENST00000374454 ABCA9Q8IUA7 1624 aa15.5■□□□□ 0.07
PDZD11-202ENST00000374454 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.49■□□□□ 0.07
PDZD11-202ENST00000374454 KIF14Q15058 1648 aa15.49■□□□□ 0.07
PDZD11-202ENST00000374454 MAP3K4Q9Y6R4 1608 aa15.47■□□□□ 0.07
PDZD11-202ENST00000374454 PLCH2O75038 1416 aa15.46■□□□□ 0.07
PDZD11-202ENST00000374454 NCOA2Q15596 1464 aa15.44■□□□□ 0.06
PDZD11-202ENST00000374454 CCNB3Q8WWL7 1395 aa15.43■□□□□ 0.06
PDZD11-202ENST00000374454 TEX14Q8IWB6 1497 aa15.43■□□□□ 0.06
PDZD11-202ENST00000374454 TTC37Q6PGP7 1564 aa15.43■□□□□ 0.06
PDZD11-202ENST00000374454 ARAP3Q8WWN8 1544 aa15.43■□□□□ 0.06
PDZD11-202ENST00000374454 GPATCH8Q9UKJ3 1502 aaKnown RBP15.43■□□□□ 0.06
PDZD11-202ENST00000374454 PHLDB1Q86UU1 1377 aa15.42■□□□□ 0.06
PDZD11-202ENST00000374454 EFCAB2Q5VUJ9 269 aa15.42■□□□□ 0.06
PDZD11-202ENST00000374454 SUPT6HQ7KZ85 1726 aaKnown RBP15.42■□□□□ 0.06
PDZD11-202ENST00000374454 PPRC1Q5VV67 1664 aaKnown RBP15.39■□□□□ 0.05
PDZD11-202ENST00000374454 CFDP1Q9UEE9 299 aaPredicted RBP15.39■□□□□ 0.05
PDZD11-202ENST00000374454 NEO1Q92859 1461 aa15.39■□□□□ 0.05
PDZD11-202ENST00000374454 FANCAO15360 1455 aa15.37■□□□□ 0.05
PDZD11-202ENST00000374454 MYO5CQ9NQX4 1742 aa15.37■□□□□ 0.05
PDZD11-202ENST00000374454 TSPOAP1O95153 1857 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms