RNA–Protein interactions for RNA: ENST00000374217.6

UBXN11-204, Transcript of UBX domain protein 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UBXN11, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-204ENST00000374217 MAGI1Q96QZ7 1491 aaPredicted RBP22.87■■□□□ 1.25
UBXN11-204ENST00000374217 ADAMTS12P58397 1594 aa22.86■■□□□ 1.25
UBXN11-204ENST00000374217 TNIKQ9UKE5 1360 aa22.84■■□□□ 1.25
UBXN11-204ENST00000374217 ACIN1Q9UKV3 1341 aaKnown RBP22.83■■□□□ 1.25
UBXN11-204ENST00000374217 FBLN2P98095 1184 aa22.82■■□□□ 1.24
UBXN11-204ENST00000374217 CHMP7Q8WUX9 453 aaPredicted RBP22.82■■□□□ 1.24
UBXN11-204ENST00000374217 SYNJ2O15056 1496 aa22.79■■□□□ 1.24
UBXN11-204ENST00000374217 RANGAP1P46060 587 aaPredicted RBP22.73■■□□□ 1.23
UBXN11-204ENST00000374217 GRIN2AQ12879 1464 aa22.72■■□□□ 1.23
UBXN11-204ENST00000374217 CENPBP07199 599 aaPredicted RBP22.72■■□□□ 1.23
UBXN11-204ENST00000374217 CEP162Q5TB80 1403 aa22.7■■□□□ 1.22
UBXN11-204ENST00000374217 CTTNBP2Q8WZ74 1663 aa22.66■■□□□ 1.22
UBXN11-204ENST00000374217 CLIP1P30622 1438 aa22.62■■□□□ 1.21
UBXN11-204ENST00000374217 CHD1O14646 1710 aa22.62■■□□□ 1.21
UBXN11-204ENST00000374217 NEUROD1Q13562 356 aa22.57■■□□□ 1.2
UBXN11-204ENST00000374217 CEP170Q5SW79 1584 aa22.57■■□□□ 1.2
UBXN11-204ENST00000374217 KIAA0586Q9BVV6 1533 aa22.56■■□□□ 1.2
UBXN11-204ENST00000374217 NUP160Q12769 1436 aa22.55■■□□□ 1.2
UBXN11-204ENST00000374217 IQGAP2Q13576 1575 aa22.55■■□□□ 1.2
UBXN11-204ENST00000374217 CCER1Q8TC90 406 aaPredicted RBP22.53■■□□□ 1.2
UBXN11-204ENST00000374217 DIEXFQ68CQ4 756 aaKnown RBP22.51■■□□□ 1.19
UBXN11-204ENST00000374217 ARHGAP35Q9NRY4 1499 aa22.47■■□□□ 1.19
UBXN11-204ENST00000374217 P3H3Q8IVL6 736 aa22.46■■□□□ 1.19
UBXN11-204ENST00000374217 EFCAB5A4FU69 1503 aa22.46■■□□□ 1.19
UBXN11-204ENST00000374217 GTF3C3Q9Y5Q9 886 aa22.45■■□□□ 1.19
UBXN11-204ENST00000374217 JPH4Q96JJ6 628 aa22.43■■□□□ 1.18
UBXN11-204ENST00000374217 UGGT2Q9NYU1 1516 aa22.41■■□□□ 1.18
UBXN11-204ENST00000374217 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.41■■□□□ 1.18
UBXN11-204ENST00000374217 OSCARQ8IYS5 282 aa22.41■■□□□ 1.18
UBXN11-204ENST00000374217 ARAP1Q96P48 1450 aa22.39■■□□□ 1.18
UBXN11-204ENST00000374217 SAMD9Q5K651 1589 aa22.38■■□□□ 1.17
UBXN11-204ENST00000374217 FHOD3Q2V2M9 1422 aa22.37■■□□□ 1.17
UBXN11-204ENST00000374217 CARMIL2Q6F5E8 1435 aa22.35■■□□□ 1.17
UBXN11-204ENST00000374217 VPS8Q8N3P4 1428 aa22.35■■□□□ 1.17
UBXN11-204ENST00000374217 CLASP1Q7Z460 1538 aa22.34■■□□□ 1.17
UBXN11-204ENST00000374217 DISP1Q96F81 1524 aa22.31■■□□□ 1.16
UBXN11-204ENST00000374217 KIAA0556O60303 1618 aa22.31■■□□□ 1.16
UBXN11-204ENST00000374217 PRG4Q92954 1404 aaPredicted RBP22.31■■□□□ 1.16
UBXN11-204ENST00000374217 FMN1Q68DA7 1419 aa22.29■■□□□ 1.16
UBXN11-204ENST00000374217 TTBK1Q5TCY1 1321 aaPredicted RBP22.29■■□□□ 1.16
UBXN11-204ENST00000374217 SHROOM2Q13796 1616 aa22.28■■□□□ 1.16
UBXN11-204ENST00000374217 APLP2Q06481 763 aa22.26■■□□□ 1.15
UBXN11-204ENST00000374217 ATP1B4Q9UN42 357 aaPredicted RBP22.24■■□□□ 1.15
UBXN11-204ENST00000374217 ZNF316A6NFI3 1004 aaPredicted RBP22.24■■□□□ 1.15
UBXN11-204ENST00000374217 CASKIN1Q8WXD9 1431 aa22.17■■□□□ 1.14
UBXN11-204ENST00000374217 PCF11O94913 1555 aaKnown RBP22.16■■□□□ 1.14
UBXN11-204ENST00000374217 PTPRGP23470 1445 aa22.15■■□□□ 1.14
UBXN11-204ENST00000374217 FYCO1Q9BQS8 1478 aa22.15■■□□□ 1.14
UBXN11-204ENST00000374217 ERCC6L2Q5T890 1561 aa22.14■■□□□ 1.14
UBXN11-204ENST00000374217 CLSPNQ9HAW4 1339 aa22.11■■□□□ 1.13
UBXN11-204ENST00000374217 HECW1Q76N89 1606 aa22.07■■□□□ 1.12
UBXN11-204ENST00000374217 RAPGEF6Q8TEU7 1601 aa22.06■■□□□ 1.12
UBXN11-204ENST00000374217 PLB1Q6P1J6 1458 aa22.05■■□□□ 1.12
UBXN11-204ENST00000374217 RIMBP3CA6NJZ7 1639 aa22.04■■□□□ 1.12
UBXN11-204ENST00000374217 RIMBP3BA6NNM3 1639 aa22.04■■□□□ 1.12
UBXN11-204ENST00000374217 RIMBP3Q9UFD9 1639 aa22.04■■□□□ 1.12
UBXN11-204ENST00000374217 ARID3CA6NKF2 412 aa22.03■■□□□ 1.12
UBXN11-204ENST00000374217 MAP3K1Q13233 1512 aa22.01■■□□□ 1.11
UBXN11-204ENST00000374217 HNRNPUL2Q1KMD3 747 aaKnown RBP22.01■■□□□ 1.11
UBXN11-204ENST00000374217 CCDC18Q5T9S5 1454 aa22.01■■□□□ 1.11
UBXN11-204ENST00000374217 TIAM1Q13009 1591 aa22.01■■□□□ 1.11
UBXN11-204ENST00000374217 ABCA8O94911 1581 aa22■■□□□ 1.11
UBXN11-204ENST00000374217 UACAQ9BZF9 1416 aa22■■□□□ 1.11
UBXN11-204ENST00000374217 NUP153P49790 1475 aaKnown RBP21.98■■□□□ 1.11
UBXN11-204ENST00000374217 EPRSP07814 1512 aaKnown RBP21.98■■□□□ 1.11
UBXN11-204ENST00000374217 CFAP43Q8NDM7 1665 aa21.97■■□□□ 1.11
UBXN11-204ENST00000374217 ARHGEF11O15085 1522 aa21.97■■□□□ 1.11
UBXN11-204ENST00000374217 KANK4Q5T7N3 995 aaPredicted RBP21.96■■□□□ 1.11
UBXN11-204ENST00000374217 LRRIQ1Q96JM4 1722 aa21.95■■□□□ 1.1
UBXN11-204ENST00000374217 CDK11AQ9UQ88 783 aaPredicted RBP21.93■■□□□ 1.1
UBXN11-204ENST00000374217 CDK13Q14004 1512 aaKnown RBP21.93■■□□□ 1.1
UBXN11-204ENST00000374217 MTUS2Q5JR59 1369 aa21.92■■□□□ 1.1
UBXN11-204ENST00000374217 LRRC9Q6ZRR7 1453 aa21.92■■□□□ 1.1
UBXN11-204ENST00000374217 ABCC2Q92887 1545 aa21.92■■□□□ 1.1
UBXN11-204ENST00000374217 UHRF1BP1LA0JNW5 1464 aa21.88■■□□□ 1.09
UBXN11-204ENST00000374217 ATP10BO94823 1461 aa21.86■■□□□ 1.09
UBXN11-204ENST00000374217 PLEKHD1A6NEE1 506 aa21.84■■□□□ 1.09
UBXN11-204ENST00000374217 CYB5RLQ6IPT4 315 aa21.83■■□□□ 1.09
UBXN11-204ENST00000374217 MIER1Q8N108 512 aa21.83■■□□□ 1.09
UBXN11-204ENST00000374217 EHBP1L1Q8N3D4 1523 aa21.83■■□□□ 1.08
UBXN11-204ENST00000374217 NPM1P06748 294 aaKnown RBP eCLIP21.81■■□□□ 1.08
UBXN11-204ENST00000374217 ADCY10Q96PN6 1610 aa21.81■■□□□ 1.08
UBXN11-204ENST00000374217 MAGI3Q5TCQ9 1506 aa21.79■■□□□ 1.08
UBXN11-204ENST00000374217 AEBP2Q6ZN18 517 aaPredicted RBP21.78■■□□□ 1.08
UBXN11-204ENST00000374217 KDM5BQ9UGL1 1544 aa21.78■■□□□ 1.08
UBXN11-204ENST00000374217 YTHDC1Q96MU7 727 aaKnown RBP21.77■■□□□ 1.08
UBXN11-204ENST00000374217 ZCCHC11Q5TAX3 1644 aaKnown RBP21.76■■□□□ 1.07
UBXN11-204ENST00000374217 SUPT6HQ7KZ85 1726 aaKnown RBP21.76■■□□□ 1.07
UBXN11-204ENST00000374217 TROQ12816 1431 aaPredicted RBP21.76■■□□□ 1.07
UBXN11-204ENST00000374217 NCOA2Q15596 1464 aa21.73■■□□□ 1.07
UBXN11-204ENST00000374217 PHLDB1Q86UU1 1377 aa21.69■■□□□ 1.06
UBXN11-204ENST00000374217 KCNH8Q96L42 1107 aa21.67■■□□□ 1.06
UBXN11-204ENST00000374217 KIF14Q15058 1648 aa21.66■■□□□ 1.06
UBXN11-204ENST00000374217 TRHP20396 242 aaPredicted RBP21.66■■□□□ 1.06
UBXN11-204ENST00000374217 CCNB3Q8WWL7 1395 aa21.64■■□□□ 1.06
UBXN11-204ENST00000374217 MYOM3Q5VTT5 1437 aa21.62■■□□□ 1.05
UBXN11-204ENST00000374217 ASXL2Q76L83 1435 aa21.62■■□□□ 1.05
UBXN11-204ENST00000374217 WDR7Q9Y4E6 1490 aa21.61■■□□□ 1.05
UBXN11-204ENST00000374217 RRBP1Q9P2E9 1410 aaKnown RBP21.6■■□□□ 1.05
UBXN11-204ENST00000374217 FAM50AQ14320 339 aaKnown RBP21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms