RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 CEP170Q5SW79 1584 aa23.69■■□□□ 1.38
SMPDL3B-201ENST00000373888 CTTNBP2Q8WZ74 1663 aa23.69■■□□□ 1.38
SMPDL3B-201ENST00000373888 KIAA0586Q9BVV6 1533 aa23.64■■□□□ 1.37
SMPDL3B-201ENST00000373888 IQGAP2Q13576 1575 aa23.6■■□□□ 1.37
SMPDL3B-201ENST00000373888 CEP162Q5TB80 1403 aa23.56■■□□□ 1.36
SMPDL3B-201ENST00000373888 CLASP1Q7Z460 1538 aa23.55■■□□□ 1.36
SMPDL3B-201ENST00000373888 OSCARQ8IYS5 282 aa23.52■■□□□ 1.36
SMPDL3B-201ENST00000373888 UGGT2Q9NYU1 1516 aa23.5■■□□□ 1.35
SMPDL3B-201ENST00000373888 CLIP1P30622 1438 aa23.5■■□□□ 1.35
SMPDL3B-201ENST00000373888 EFCAB5A4FU69 1503 aa23.46■■□□□ 1.35
SMPDL3B-201ENST00000373888 SHROOM2Q13796 1616 aa23.46■■□□□ 1.35
SMPDL3B-201ENST00000373888 RANGAP1P46060 587 aaPredicted RBP23.45■■□□□ 1.34
SMPDL3B-201ENST00000373888 SAMD9Q5K651 1589 aa23.44■■□□□ 1.34
SMPDL3B-201ENST00000373888 JPH4Q96JJ6 628 aa23.44■■□□□ 1.34
SMPDL3B-201ENST00000373888 ARHGAP35Q9NRY4 1499 aa23.44■■□□□ 1.34
SMPDL3B-201ENST00000373888 DISP1Q96F81 1524 aa23.4■■□□□ 1.34
SMPDL3B-201ENST00000373888 KIAA0556O60303 1618 aa23.37■■□□□ 1.33
SMPDL3B-201ENST00000373888 PRG4Q92954 1404 aaPredicted RBP23.35■■□□□ 1.33
SMPDL3B-201ENST00000373888 ARAP1Q96P48 1450 aa23.35■■□□□ 1.33
SMPDL3B-201ENST00000373888 CARMIL2Q6F5E8 1435 aa23.35■■□□□ 1.33
SMPDL3B-201ENST00000373888 FHOD3Q2V2M9 1422 aa23.32■■□□□ 1.32
SMPDL3B-201ENST00000373888 P3H3Q8IVL6 736 aa23.3■■□□□ 1.32
SMPDL3B-201ENST00000373888 ERCC6L2Q5T890 1561 aa23.27■■□□□ 1.32
SMPDL3B-201ENST00000373888 VPS8Q8N3P4 1428 aa23.23■■□□□ 1.31
SMPDL3B-201ENST00000373888 FMN1Q68DA7 1419 aa23.23■■□□□ 1.31
SMPDL3B-201ENST00000373888 PTPRGP23470 1445 aa23.16■■□□□ 1.3
SMPDL3B-201ENST00000373888 ARHGEF11O15085 1522 aa23.16■■□□□ 1.3
SMPDL3B-201ENST00000373888 CASKIN1Q8WXD9 1431 aa23.12■■□□□ 1.29
SMPDL3B-201ENST00000373888 PCF11O94913 1555 aaKnown RBP23.12■■□□□ 1.29
SMPDL3B-201ENST00000373888 FYCO1Q9BQS8 1478 aa23.1■■□□□ 1.29
SMPDL3B-201ENST00000373888 TTBK1Q5TCY1 1321 aaPredicted RBP23.09■■□□□ 1.29
SMPDL3B-201ENST00000373888 ABCA8O94911 1581 aa23.08■■□□□ 1.29
SMPDL3B-201ENST00000373888 RIMBP3CA6NJZ7 1639 aa23.08■■□□□ 1.28
SMPDL3B-201ENST00000373888 RIMBP3BA6NNM3 1639 aa23.08■■□□□ 1.28
SMPDL3B-201ENST00000373888 RIMBP3Q9UFD9 1639 aa23.08■■□□□ 1.28
SMPDL3B-201ENST00000373888 RAPGEF6Q8TEU7 1601 aa23.07■■□□□ 1.28
SMPDL3B-201ENST00000373888 PLB1Q6P1J6 1458 aa23.07■■□□□ 1.28
SMPDL3B-201ENST00000373888 UACAQ9BZF9 1416 aa23.04■■□□□ 1.28
SMPDL3B-201ENST00000373888 HECW1Q76N89 1606 aa23.04■■□□□ 1.28
SMPDL3B-201ENST00000373888 NUP153P49790 1475 aaKnown RBP23■■□□□ 1.27
SMPDL3B-201ENST00000373888 ABCC2Q92887 1545 aa23■■□□□ 1.27
SMPDL3B-201ENST00000373888 UHRF1BP1LA0JNW5 1464 aa23■■□□□ 1.27
SMPDL3B-201ENST00000373888 MAP3K1Q13233 1512 aa22.96■■□□□ 1.27
SMPDL3B-201ENST00000373888 CCDC18Q5T9S5 1454 aa22.96■■□□□ 1.27
SMPDL3B-201ENST00000373888 ATP1B4Q9UN42 357 aaPredicted RBP22.96■■□□□ 1.27
SMPDL3B-201ENST00000373888 LRRIQ1Q96JM4 1722 aa22.96■■□□□ 1.27
SMPDL3B-201ENST00000373888 EPRSP07814 1512 aaKnown RBP22.96■■□□□ 1.27
SMPDL3B-201ENST00000373888 TIAM1Q13009 1591 aa22.93■■□□□ 1.26
SMPDL3B-201ENST00000373888 ADCY10Q96PN6 1610 aa22.93■■□□□ 1.26
SMPDL3B-201ENST00000373888 APLP2Q06481 763 aa22.92■■□□□ 1.26
SMPDL3B-201ENST00000373888 CFAP43Q8NDM7 1665 aa22.92■■□□□ 1.26
SMPDL3B-201ENST00000373888 CDK13Q14004 1512 aaKnown RBP22.89■■□□□ 1.26
SMPDL3B-201ENST00000373888 DNAJC5Q9H3Z4 198 aa22.89■■□□□ 1.26
SMPDL3B-201ENST00000373888 ATP10BO94823 1461 aa22.89■■□□□ 1.25
SMPDL3B-201ENST00000373888 KDM5BQ9UGL1 1544 aa22.89■■□□□ 1.25
SMPDL3B-201ENST00000373888 CYB5RLQ6IPT4 315 aa22.87■■□□□ 1.25
SMPDL3B-201ENST00000373888 ARID3CA6NKF2 412 aa22.85■■□□□ 1.25
SMPDL3B-201ENST00000373888 ZCCHC11Q5TAX3 1644 aaKnown RBP22.82■■□□□ 1.24
SMPDL3B-201ENST00000373888 LRRC9Q6ZRR7 1453 aa22.82■■□□□ 1.24
SMPDL3B-201ENST00000373888 KANK4Q5T7N3 995 aaPredicted RBP22.8■■□□□ 1.24
SMPDL3B-201ENST00000373888 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.79■■□□□ 1.24
SMPDL3B-201ENST00000373888 HNRNPUL2Q1KMD3 747 aaKnown RBP22.79■■□□□ 1.24
SMPDL3B-201ENST00000373888 CDK11AQ9UQ88 783 aaPredicted RBP22.78■■□□□ 1.24
SMPDL3B-201ENST00000373888 MAGI3Q5TCQ9 1506 aa22.78■■□□□ 1.24
SMPDL3B-201ENST00000373888 EHBP1L1Q8N3D4 1523 aa22.77■■□□□ 1.24
SMPDL3B-201ENST00000373888 MTUS2Q5JR59 1369 aa22.75■■□□□ 1.23
SMPDL3B-201ENST00000373888 TROQ12816 1431 aaPredicted RBP22.73■■□□□ 1.23
SMPDL3B-201ENST00000373888 NPM1P06748 294 aaKnown RBP eCLIP22.73■■□□□ 1.23
SMPDL3B-201ENST00000373888 PPARGC1BQ86YN6 1023 aaKnown RBP22.72■■□□□ 1.23
SMPDL3B-201ENST00000373888 PLEKHD1A6NEE1 506 aa22.72■■□□□ 1.23
SMPDL3B-201ENST00000373888 MAPKBP1O60336 1514 aa22.67■■□□□ 1.22
SMPDL3B-201ENST00000373888 SUPT6HQ7KZ85 1726 aaKnown RBP22.67■■□□□ 1.22
SMPDL3B-201ENST00000373888 ASXL2Q76L83 1435 aa22.67■■□□□ 1.22
SMPDL3B-201ENST00000373888 WDR7Q9Y4E6 1490 aa22.66■■□□□ 1.22
SMPDL3B-201ENST00000373888 KIF14Q15058 1648 aa22.63■■□□□ 1.21
SMPDL3B-201ENST00000373888 NCOA2Q15596 1464 aa22.63■■□□□ 1.21
SMPDL3B-201ENST00000373888 ABCC10Q5T3U5 1492 aa22.58■■□□□ 1.2
SMPDL3B-201ENST00000373888 PHLDB1Q86UU1 1377 aa22.56■■□□□ 1.2
SMPDL3B-201ENST00000373888 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.54■■□□□ 1.2
SMPDL3B-201ENST00000373888 KCNH8Q96L42 1107 aa22.54■■□□□ 1.2
SMPDL3B-201ENST00000373888 TTC37Q6PGP7 1564 aa22.52■■□□□ 1.2
SMPDL3B-201ENST00000373888 MYOM3Q5VTT5 1437 aa22.52■■□□□ 1.2
SMPDL3B-201ENST00000373888 CCNB3Q8WWL7 1395 aa22.51■■□□□ 1.19
SMPDL3B-201ENST00000373888 ABCA9Q8IUA7 1624 aa22.5■■□□□ 1.19
SMPDL3B-201ENST00000373888 GPATCH8Q9UKJ3 1502 aaKnown RBP22.49■■□□□ 1.19
SMPDL3B-201ENST00000373888 ITSN2Q9NZM3 1697 aa22.47■■□□□ 1.19
SMPDL3B-201ENST00000373888 RRBP1Q9P2E9 1410 aaKnown RBP22.46■■□□□ 1.19
SMPDL3B-201ENST00000373888 GLI2P10070 1586 aa22.46■■□□□ 1.19
SMPDL3B-201ENST00000373888 CDC42BPAQ5VT25 1732 aa22.46■■□□□ 1.19
SMPDL3B-201ENST00000373888 FGD6Q6ZV73 1430 aa22.46■■□□□ 1.19
SMPDL3B-201ENST00000373888 DIP2BQ9P265 1576 aa22.46■■□□□ 1.19
SMPDL3B-201ENST00000373888 MIA2Q96PC5 1412 aa22.45■■□□□ 1.18
SMPDL3B-201ENST00000373888 PREX2Q70Z35 1606 aa22.44■■□□□ 1.18
SMPDL3B-201ENST00000373888 MYO5CQ9NQX4 1742 aa22.43■■□□□ 1.18
SMPDL3B-201ENST00000373888 PLCH2O75038 1416 aa22.42■■□□□ 1.18
SMPDL3B-201ENST00000373888 ARAP3Q8WWN8 1544 aa22.42■■□□□ 1.18
SMPDL3B-201ENST00000373888 CDC42BPBQ9Y5S2 1711 aa22.39■■□□□ 1.18
SMPDL3B-201ENST00000373888 TRIM26Q12899 539 aaPredicted RBP22.39■■□□□ 1.17
SMPDL3B-201ENST00000373888 CFDP1Q9UEE9 299 aaPredicted RBP22.39■■□□□ 1.17
SMPDL3B-201ENST00000373888 PTPN23Q9H3S7 1636 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms