RNA–Protein interactions for RNA: ENST00000373677.1

NHSL2-201, Transcript of NHS like 2, humanhuman

TSL 1 (best)

Gene NHSL2, Length 3,978 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHSL2-201ENST00000373677 CCDC136Q96JN2 1154 aa11.67□□□□□ -0.54
NHSL2-201ENST00000373677 SALL2Q9Y467 1007 aaPredicted RBP11.66□□□□□ -0.54
NHSL2-201ENST00000373677 RRP7BPQ9NSQ0 103 aa11.63□□□□□ -0.55
NHSL2-201ENST00000373677 RAPGEF2Q9Y4G8 1499 aa11.63□□□□□ -0.55
NHSL2-201ENST00000373677 RAB3GAP2Q9H2M9 1393 aa11.63□□□□□ -0.55
NHSL2-201ENST00000373677 B4GALNT3Q6L9W6 998 aa11.62□□□□□ -0.55
NHSL2-201ENST00000373677 EIF4G2P78344 907 aaKnown RBP eCLIP11.62□□□□□ -0.55
NHSL2-201ENST00000373677 ZBTB47Q9UFB7 747 aaPredicted RBP11.62□□□□□ -0.55
NHSL2-201ENST00000373677 TOP2AP11388 1531 aaKnown RBP11.61□□□□□ -0.55
NHSL2-201ENST00000373677 MTUS2Q5JR59 1369 aa11.61□□□□□ -0.55
NHSL2-201ENST00000373677 MYT1LQ9UL68 1186 aa11.6□□□□□ -0.55
NHSL2-201ENST00000373677 KIF27Q86VH2 1401 aa11.6□□□□□ -0.55
NHSL2-201ENST00000373677 BAZ1BQ9UIG0 1483 aaKnown RBP11.6□□□□□ -0.55
NHSL2-201ENST00000373677 CCER2I3L3R5 266 aa11.59□□□□□ -0.55
NHSL2-201ENST00000373677 PPP4R2Q9NY27 417 aa11.58□□□□□ -0.56
NHSL2-201ENST00000373677 SETD5Q9C0A6 1442 aa11.57□□□□□ -0.56
NHSL2-201ENST00000373677 TMC1Q8TDI8 760 aa11.57□□□□□ -0.56
NHSL2-201ENST00000373677 ZNF777Q9ULD5 760 aaPredicted RBP11.56□□□□□ -0.56
NHSL2-201ENST00000373677 PPP1R15AO75807 674 aaPredicted RBP11.54□□□□□ -0.56
NHSL2-201ENST00000373677 EIF5BO60841 1220 aaKnown RBP11.52□□□□□ -0.56
NHSL2-201ENST00000373677 DEKP35659 375 aaKnown RBP11.52□□□□□ -0.57
NHSL2-201ENST00000373677 FBLN2P98095 1184 aa11.52□□□□□ -0.57
NHSL2-201ENST00000373677 TIMELESSQ9UNS1 1208 aa11.52□□□□□ -0.57
NHSL2-201ENST00000373677 NOP58Q9Y2X3 529 aaKnown RBP11.51□□□□□ -0.57
NHSL2-201ENST00000373677 SLC4A1APQ9BWU0 796 aaKnown RBP11.5□□□□□ -0.57
NHSL2-201ENST00000373677 SMARCA2P51531 1590 aa11.5□□□□□ -0.57
NHSL2-201ENST00000373677 RTN4Q9NQC3 1192 aaKnown RBP11.49□□□□□ -0.57
NHSL2-201ENST00000373677 HSPA5P11021 654 aaKnown RBP11.48□□□□□ -0.57
NHSL2-201ENST00000373677 KDM2AQ9Y2K7 1162 aa11.48□□□□□ -0.57
NHSL2-201ENST00000373677 SMARCA4P51532 1647 aa11.48□□□□□ -0.57
NHSL2-201ENST00000373677 ERCC6Q03468 1493 aa11.47□□□□□ -0.57
NHSL2-201ENST00000373677 LAS1LQ9Y4W2 734 aaKnown RBP11.45□□□□□ -0.58
NHSL2-201ENST00000373677 CARMIL1Q5VZK9 1371 aa11.45□□□□□ -0.58
NHSL2-201ENST00000373677 CUX2O14529 1486 aa11.45□□□□□ -0.58
NHSL2-201ENST00000373677 FOXD1Q16676 465 aa11.44□□□□□ -0.58
NHSL2-201ENST00000373677 KIF21BO75037 1637 aa11.44□□□□□ -0.58
NHSL2-201ENST00000373677 FHAD1B1AJZ9 1412 aa11.43□□□□□ -0.58
NHSL2-201ENST00000373677 CANXP27824 592 aaKnown RBP11.41□□□□□ -0.58
NHSL2-201ENST00000373677 NEFMP07197 916 aa11.4□□□□□ -0.59
NHSL2-201ENST00000373677 ARHGAP35Q9NRY4 1499 aa11.39□□□□□ -0.59
NHSL2-201ENST00000373677 ARXQ96QS3 562 aa11.38□□□□□ -0.59
NHSL2-201ENST00000373677 ERICH6BQ5W0A0 696 aa11.37□□□□□ -0.59
NHSL2-201ENST00000373677 FANCIQ9NVI1 1328 aa11.36□□□□□ -0.59
NHSL2-201ENST00000373677 EIF4G1Q04637 1599 aaKnown RBP11.35□□□□□ -0.59
NHSL2-201ENST00000373677 BICRAQ9NZM4 1560 aa11.35□□□□□ -0.59
NHSL2-201ENST00000373677 SYNJ1O43426 1573 aa11.34□□□□□ -0.59
NHSL2-201ENST00000373677 ARAP1Q96P48 1450 aa11.34□□□□□ -0.59
NHSL2-201ENST00000373677 L3MBTL2Q969R5 705 aa11.34□□□□□ -0.59
NHSL2-201ENST00000373677 CARD11Q9BXL7 1154 aa11.34□□□□□ -0.59
NHSL2-201ENST00000373677 FHOD3Q2V2M9 1422 aa11.33□□□□□ -0.6
NHSL2-201ENST00000373677 ATAD2BQ9ULI0 1458 aa11.33□□□□□ -0.6
NHSL2-201ENST00000373677 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.33□□□□□ -0.6
NHSL2-201ENST00000373677 CC2D2AQ9P2K1 1620 aa11.33□□□□□ -0.6
NHSL2-201ENST00000373677 PHLDB1Q86UU1 1377 aa11.32□□□□□ -0.6
NHSL2-201ENST00000373677 RGL3Q3MIN7 710 aa11.32□□□□□ -0.6
NHSL2-201ENST00000373677 MPHOSPH9Q99550 1183 aa11.31□□□□□ -0.6
NHSL2-201ENST00000373677 RRBP1Q9P2E9 1410 aaKnown RBP11.31□□□□□ -0.6
NHSL2-201ENST00000373677 PRKRIP1Q9H875 184 aaPredicted RBP11.31□□□□□ -0.6
NHSL2-201ENST00000373677 PPM1GO15355 546 aaPredicted RBP11.3□□□□□ -0.6
NHSL2-201ENST00000373677 IPO9Q96P70 1041 aaKnown RBP11.3□□□□□ -0.6
NHSL2-201ENST00000373677 MSH5O43196 834 aa11.29□□□□□ -0.6
NHSL2-201ENST00000373677 WDR43Q15061 677 aaKnown RBP eCLIP11.29□□□□□ -0.6
NHSL2-201ENST00000373677 DDRGK1Q96HY6 314 aa11.29□□□□□ -0.6
NHSL2-201ENST00000373677 TSPY4P0CV99 314 aa11.28□□□□□ -0.6
NHSL2-201ENST00000373677 TSPY10P0CW01 314 aa11.28□□□□□ -0.6
NHSL2-201ENST00000373677 NUDCQ9Y266 331 aa11.28□□□□□ -0.6
NHSL2-201ENST00000373677 RGS3P49796 1198 aa11.27□□□□□ -0.6
NHSL2-201ENST00000373677 WDR97A6NE52 1622 aa11.27□□□□□ -0.6
NHSL2-201ENST00000373677 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.27□□□□□ -0.61
NHSL2-201ENST00000373677 FMN1Q68DA7 1419 aa11.27□□□□□ -0.61
NHSL2-201ENST00000373677 CFDP1Q9UEE9 299 aaPredicted RBP11.26□□□□□ -0.61
NHSL2-201ENST00000373677 CC2D1BQ5T0F9 858 aaKnown RBP11.26□□□□□ -0.61
NHSL2-201ENST00000373677 CCDC18Q5T9S5 1454 aa11.25□□□□□ -0.61
NHSL2-201ENST00000373677 WASHC2AQ641Q2 1341 aa11.25□□□□□ -0.61
NHSL2-201ENST00000373677 ZBED9Q6R2W3 1325 aa11.25□□□□□ -0.61
NHSL2-201ENST00000373677 UPF2Q9HAU5 1272 aaKnown RBP11.25□□□□□ -0.61
NHSL2-201ENST00000373677 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.25□□□□□ -0.61
NHSL2-201ENST00000373677 CCDC184Q52MB2 194 aa11.24□□□□□ -0.61
NHSL2-201ENST00000373677 RCAN3Q9UKA8 241 aa11.23□□□□□ -0.61
NHSL2-201ENST00000373677 DCAF11Q8TEB1 546 aa11.23□□□□□ -0.61
NHSL2-201ENST00000373677 IGF1RP08069 1367 aa11.22□□□□□ -0.61
NHSL2-201ENST00000373677 LRRC9Q6ZRR7 1453 aa11.22□□□□□ -0.61
NHSL2-201ENST00000373677 PAK3O75914 559 aaPredicted RBP11.21□□□□□ -0.61
NHSL2-201ENST00000373677 PKD2Q13563 968 aa11.21□□□□□ -0.62
NHSL2-201ENST00000373677 PRXQ9BXM0 1461 aa11.21□□□□□ -0.62
NHSL2-201ENST00000373677 UNC13AQ9UPW8 1703 aa11.2□□□□□ -0.62
NHSL2-201ENST00000373677 TCERG1O14776 1098 aaKnown RBP11.2□□□□□ -0.62
NHSL2-201ENST00000373677 TDRD9Q8NDG6 1382 aaKnown RBP11.19□□□□□ -0.62
NHSL2-201ENST00000373677 EXOC6Q8TAG9 804 aa11.18□□□□□ -0.62
NHSL2-201ENST00000373677 ERICH3Q5RHP9 1530 aa11.18□□□□□ -0.62
NHSL2-201ENST00000373677 HSP90AA1P07900 732 aaKnown RBP11.17□□□□□ -0.62
NHSL2-201ENST00000373677 FGD6Q6ZV73 1430 aa11.16□□□□□ -0.62
NHSL2-201ENST00000373677 UACAQ9BZF9 1416 aa11.16□□□□□ -0.62
NHSL2-201ENST00000373677 PLIN1O60240 522 aa11.16□□□□□ -0.62
NHSL2-201ENST00000373677 PDE4AP27815 886 aa11.16□□□□□ -0.62
NHSL2-201ENST00000373677 SLC4A3P48751 1232 aa11.16□□□□□ -0.62
NHSL2-201ENST00000373677 CCDC7Q96M83 1385 aa11.16□□□□□ -0.62
NHSL2-201ENST00000373677 KNSTRNQ9Y448 316 aa11.16□□□□□ -0.62
NHSL2-201ENST00000373677 KIF7Q2M1P5 1343 aa11.15□□□□□ -0.62
NHSL2-201ENST00000373677 CHGAP10645 457 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms