RNA–Protein interactions for RNA: ENST00000373668.7

COL16A1-202, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL16A1, Length 3,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-202ENST00000373668 POLA1P09884 1462 aaPredicted RBP20.08■□□□□ 0.8
COL16A1-202ENST00000373668 TOPBP1Q92547 1522 aa20.07■□□□□ 0.8
COL16A1-202ENST00000373668 KCNH8Q96L42 1107 aa20.06■□□□□ 0.8
COL16A1-202ENST00000373668 TOP2BQ02880 1626 aa20.04■□□□□ 0.8
COL16A1-202ENST00000373668 MTUS2Q5JR59 1369 aa20.03■□□□□ 0.8
COL16A1-202ENST00000373668 MIER1Q8N108 512 aa20.02■□□□□ 0.8
COL16A1-202ENST00000373668 CNGB1Q14028 1251 aaPredicted RBP20.02■□□□□ 0.8
COL16A1-202ENST00000373668 VPS8Q8N3P4 1428 aa20.01■□□□□ 0.79
COL16A1-202ENST00000373668 GAPVD1Q14C86 1478 aa19.99■□□□□ 0.79
COL16A1-202ENST00000373668 RRP7BPQ9NSQ0 103 aa19.99■□□□□ 0.79
COL16A1-202ENST00000373668 URB2Q14146 1524 aaKnown RBP19.97■□□□□ 0.79
COL16A1-202ENST00000373668 JPH4Q96JJ6 628 aa19.9■□□□□ 0.78
COL16A1-202ENST00000373668 PRXQ9BXM0 1461 aa19.89■□□□□ 0.77
COL16A1-202ENST00000373668 ZNF608Q9ULD9 1512 aaPredicted RBP19.88■□□□□ 0.77
COL16A1-202ENST00000373668 ARAP1Q96P48 1450 aa19.88■□□□□ 0.77
COL16A1-202ENST00000373668 HIRIP3Q9BW71 556 aaPredicted RBP19.86■□□□□ 0.77
COL16A1-202ENST00000373668 POLR3GLQ9BT43 218 aa19.85■□□□□ 0.77
COL16A1-202ENST00000373668 CDK11AQ9UQ88 783 aaPredicted RBP19.85■□□□□ 0.77
COL16A1-202ENST00000373668 ZNF326Q5BKZ1 582 aaKnown RBP19.83■□□□□ 0.77
COL16A1-202ENST00000373668 KIF21BO75037 1637 aa19.82■□□□□ 0.76
COL16A1-202ENST00000373668 MRC2Q9UBG0 1479 aa19.8■□□□□ 0.76
COL16A1-202ENST00000373668 DNMBPQ6XZF7 1577 aa19.79■□□□□ 0.76
COL16A1-202ENST00000373668 LAMC3Q9Y6N6 1575 aa19.79■□□□□ 0.76
COL16A1-202ENST00000373668 ARHGAP35Q9NRY4 1499 aa19.78■□□□□ 0.76
COL16A1-202ENST00000373668 SIN3AQ96ST3 1273 aa19.78■□□□□ 0.76
COL16A1-202ENST00000373668 PLEKHD1A6NEE1 506 aa19.77■□□□□ 0.76
COL16A1-202ENST00000373668 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.75■□□□□ 0.75
COL16A1-202ENST00000373668 SENP3Q9H4L4 574 aaPredicted RBP19.73■□□□□ 0.75
COL16A1-202ENST00000373668 CCNB3Q8WWL7 1395 aa19.73■□□□□ 0.75
COL16A1-202ENST00000373668 CFDP1Q9UEE9 299 aaPredicted RBP19.72■□□□□ 0.75
COL16A1-202ENST00000373668 FHAD1B1AJZ9 1412 aa19.7■□□□□ 0.74
COL16A1-202ENST00000373668 FOXD1Q16676 465 aa19.7■□□□□ 0.74
COL16A1-202ENST00000373668 BIVM-ERCC5R4GMW8 1640 aa19.68■□□□□ 0.74
COL16A1-202ENST00000373668 ABCA10Q8WWZ4 1543 aa19.68■□□□□ 0.74
COL16A1-202ENST00000373668 KIF21AQ7Z4S6 1674 aa19.67■□□□□ 0.74
COL16A1-202ENST00000373668 SNAPC4Q5SXM2 1469 aa19.66■□□□□ 0.74
COL16A1-202ENST00000373668 ZNF644Q9H582 1327 aaPredicted RBP19.66■□□□□ 0.74
COL16A1-202ENST00000373668 GRIN2BQ13224 1484 aa19.64■□□□□ 0.73
COL16A1-202ENST00000373668 BCANQ96GW7 911 aa19.64■□□□□ 0.73
COL16A1-202ENST00000373668 NPM1P06748 294 aaKnown RBP eCLIP19.63■□□□□ 0.73
COL16A1-202ENST00000373668 PHLDB1Q86UU1 1377 aa19.6■□□□□ 0.73
COL16A1-202ENST00000373668 PLPPR3Q6T4P5 718 aa19.59■□□□□ 0.73
COL16A1-202ENST00000373668 FMN1Q68DA7 1419 aa19.59■□□□□ 0.73
COL16A1-202ENST00000373668 ERICH3Q5RHP9 1530 aa19.58■□□□□ 0.72
COL16A1-202ENST00000373668 TSPY4P0CV99 314 aa19.57■□□□□ 0.72
COL16A1-202ENST00000373668 TSPY10P0CW01 314 aa19.57■□□□□ 0.72
COL16A1-202ENST00000373668 IFT140Q96RY7 1462 aa19.56■□□□□ 0.72
COL16A1-202ENST00000373668 HNRNPMP52272 730 aaKnown RBP eCLIP19.55■□□□□ 0.72
COL16A1-202ENST00000373668 CYB5RLQ6IPT4 315 aa19.54■□□□□ 0.72
COL16A1-202ENST00000373668 SLC4A1APQ9BWU0 796 aaKnown RBP19.52■□□□□ 0.72
COL16A1-202ENST00000373668 KDM2AQ9Y2K7 1162 aa19.52■□□□□ 0.71
COL16A1-202ENST00000373668 CARMIL2Q6F5E8 1435 aa19.51■□□□□ 0.71
COL16A1-202ENST00000373668 RAB3GAP2Q9H2M9 1393 aa19.5■□□□□ 0.71
COL16A1-202ENST00000373668 SUPT16HQ9Y5B9 1047 aaKnown RBP19.49■□□□□ 0.71
COL16A1-202ENST00000373668 PTPRGP23470 1445 aa19.48■□□□□ 0.71
COL16A1-202ENST00000373668 NEFLP07196 543 aa19.46■□□□□ 0.71
COL16A1-202ENST00000373668 RGL3Q3MIN7 710 aa19.45■□□□□ 0.7
COL16A1-202ENST00000373668 DDX10Q13206 875 aaKnown RBP19.44■□□□□ 0.7
COL16A1-202ENST00000373668 OSCARQ8IYS5 282 aa19.43■□□□□ 0.7
COL16A1-202ENST00000373668 PRG4Q92954 1404 aaPredicted RBP19.43■□□□□ 0.7
COL16A1-202ENST00000373668 PRDM2Q13029 1718 aa19.42■□□□□ 0.7
COL16A1-202ENST00000373668 LRRC9Q6ZRR7 1453 aa19.42■□□□□ 0.7
COL16A1-202ENST00000373668 TONSLQ96HA7 1378 aa19.41■□□□□ 0.7
COL16A1-202ENST00000373668 CHGAP10645 457 aaKnown RBP19.4■□□□□ 0.7
COL16A1-202ENST00000373668 CDK13Q14004 1512 aaKnown RBP19.39■□□□□ 0.69
COL16A1-202ENST00000373668 BCL11AQ9H165 835 aa19.39■□□□□ 0.69
COL16A1-202ENST00000373668 PLB1Q6P1J6 1458 aa19.38■□□□□ 0.69
COL16A1-202ENST00000373668 FKBP8Q14318 412 aa19.36■□□□□ 0.69
COL16A1-202ENST00000373668 SETD5Q9C0A6 1442 aa19.35■□□□□ 0.69
COL16A1-202ENST00000373668 GRIN2AQ12879 1464 aa19.35■□□□□ 0.69
COL16A1-202ENST00000373668 CASKIN1Q8WXD9 1431 aa19.34■□□□□ 0.69
COL16A1-202ENST00000373668 CLSPNQ9HAW4 1339 aa19.33■□□□□ 0.68
COL16A1-202ENST00000373668 SENP3-EIF4A1A0A087X0R7 540 aa19.32■□□□□ 0.68
COL16A1-202ENST00000373668 PCF11O94913 1555 aaKnown RBP19.31■□□□□ 0.68
COL16A1-202ENST00000373668 DHX57Q6P158 1386 aaKnown RBP19.3■□□□□ 0.68
COL16A1-202ENST00000373668 KIAA0586Q9BVV6 1533 aa19.28■□□□□ 0.68
COL16A1-202ENST00000373668 NCOA2Q15596 1464 aa19.28■□□□□ 0.68
COL16A1-202ENST00000373668 TSHZ2Q9NRE2 1034 aa19.27■□□□□ 0.68
COL16A1-202ENST00000373668 SYNJ2O15056 1496 aa19.27■□□□□ 0.68
COL16A1-202ENST00000373668 IQGAP2Q13576 1575 aa19.26■□□□□ 0.67
COL16A1-202ENST00000373668 MPHOSPH9Q99550 1183 aa19.26■□□□□ 0.67
COL16A1-202ENST00000373668 FGD6Q6ZV73 1430 aa19.25■□□□□ 0.67
COL16A1-202ENST00000373668 PKD2Q13563 968 aa19.25■□□□□ 0.67
COL16A1-202ENST00000373668 MLECQ14165 292 aa19.24■□□□□ 0.67
COL16A1-202ENST00000373668 TIAM1Q13009 1591 aa19.23■□□□□ 0.67
COL16A1-202ENST00000373668 AFAP1Q8N556 730 aa19.22■□□□□ 0.67
COL16A1-202ENST00000373668 CUL7Q14999 1698 aa19.22■□□□□ 0.67
COL16A1-202ENST00000373668 EIF4G3O43432 1585 aaKnown RBP19.22■□□□□ 0.67
COL16A1-202ENST00000373668 ANP32EQ9BTT0 268 aa19.22■□□□□ 0.67
COL16A1-202ENST00000373668 GGT6Q6P531 493 aa19.21■□□□□ 0.67
COL16A1-202ENST00000373668 TARBP1Q13395 1621 aaKnown RBP19.21■□□□□ 0.67
COL16A1-202ENST00000373668 ERICH6Q7L0X2 663 aa19.21■□□□□ 0.67
COL16A1-202ENST00000373668 CCDC18Q5T9S5 1454 aa19.21■□□□□ 0.67
COL16A1-202ENST00000373668 FYCO1Q9BQS8 1478 aa19.2■□□□□ 0.66
COL16A1-202ENST00000373668 WDR62O43379 1518 aa19.19■□□□□ 0.66
COL16A1-202ENST00000373668 TRHP20396 242 aaPredicted RBP19.19■□□□□ 0.66
COL16A1-202ENST00000373668 EPRSP07814 1512 aaKnown RBP19.18■□□□□ 0.66
COL16A1-202ENST00000373668 MYOM3Q5VTT5 1437 aa19.18■□□□□ 0.66
COL16A1-202ENST00000373668 EFCAB2Q5VUJ9 269 aa19.17■□□□□ 0.66
COL16A1-202ENST00000373668 MAGI1Q96QZ7 1491 aaPredicted RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms