RNA–Protein interactions for RNA: ENST00000373667.4

COL16A1-201, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 924 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-201ENST00000373667 JPH4Q96JJ6 628 aa31.27■■■□□ 2.6
COL16A1-201ENST00000373667 ARHGEF11O15085 1522 aa31.22■■■□□ 2.59
COL16A1-201ENST00000373667 RIMBP3CA6NJZ7 1639 aa31.2■■■□□ 2.59
COL16A1-201ENST00000373667 RIMBP3BA6NNM3 1639 aa31.2■■■□□ 2.59
COL16A1-201ENST00000373667 RIMBP3Q9UFD9 1639 aa31.2■■■□□ 2.59
COL16A1-201ENST00000373667 KIF21BO75037 1637 aa31.19■■■□□ 2.58
COL16A1-201ENST00000373667 IQGAP2Q13576 1575 aa31.14■■■□□ 2.58
COL16A1-201ENST00000373667 SHROOM2Q13796 1616 aa31.14■■■□□ 2.58
COL16A1-201ENST00000373667 PRG4Q92954 1404 aaPredicted RBP31.14■■■□□ 2.58
COL16A1-201ENST00000373667 UBTFP17480 764 aaKnown RBP31.13■■■□□ 2.57
COL16A1-201ENST00000373667 CTTNBP2Q8WZ74 1663 aa31.12■■■□□ 2.57
COL16A1-201ENST00000373667 GOLGA3Q08378 1498 aa31.08■■■□□ 2.57
COL16A1-201ENST00000373667 ERCC6L2Q5T890 1561 aa31.08■■■□□ 2.57
COL16A1-201ENST00000373667 CYB5RLQ6IPT4 315 aa31.06■■■□□ 2.56
COL16A1-201ENST00000373667 RANGAP1P46060 587 aaPredicted RBP31.02■■■□□ 2.56
COL16A1-201ENST00000373667 ARAP1Q96P48 1450 aa31■■■□□ 2.55
COL16A1-201ENST00000373667 CARMIL2Q6F5E8 1435 aa30.98■■■□□ 2.55
COL16A1-201ENST00000373667 UGGT2Q9NYU1 1516 aa30.96■■■□□ 2.55
COL16A1-201ENST00000373667 TTBK1Q5TCY1 1321 aaPredicted RBP30.96■■■□□ 2.55
COL16A1-201ENST00000373667 DISP1Q96F81 1524 aa30.89■■■□□ 2.54
COL16A1-201ENST00000373667 P3H3Q8IVL6 736 aa30.88■■■□□ 2.53
COL16A1-201ENST00000373667 TNIKQ9UKE5 1360 aa30.85■■■□□ 2.53
COL16A1-201ENST00000373667 LOC105371045A0A1W2PR82 267 aa30.84■■■□□ 2.53
COL16A1-201ENST00000373667 PTPRGP23470 1445 aa30.83■■■□□ 2.53
COL16A1-201ENST00000373667 KIAA0556O60303 1618 aa30.83■■■□□ 2.53
COL16A1-201ENST00000373667 SAMD9Q5K651 1589 aa30.71■■■□□ 2.51
COL16A1-201ENST00000373667 EFCAB5A4FU69 1503 aa30.65■■■□□ 2.5
COL16A1-201ENST00000373667 FHOD3Q2V2M9 1422 aa30.64■■■□□ 2.5
COL16A1-201ENST00000373667 NPM1P06748 294 aaKnown RBP eCLIP30.6■■■□□ 2.49
COL16A1-201ENST00000373667 UACAQ9BZF9 1416 aa30.6■■■□□ 2.49
COL16A1-201ENST00000373667 ARHGAP35Q9NRY4 1499 aa30.59■■■□□ 2.49
COL16A1-201ENST00000373667 CLIP1P30622 1438 aa30.56■■■□□ 2.48
COL16A1-201ENST00000373667 ADCY10Q96PN6 1610 aa30.55■■■□□ 2.48
COL16A1-201ENST00000373667 PLB1Q6P1J6 1458 aa30.54■■■□□ 2.48
COL16A1-201ENST00000373667 CEP162Q5TB80 1403 aa30.49■■■□□ 2.47
COL16A1-201ENST00000373667 UHRF1BP1LA0JNW5 1464 aa30.49■■■□□ 2.47
COL16A1-201ENST00000373667 ABCC2Q92887 1545 aa30.48■■■□□ 2.47
COL16A1-201ENST00000373667 ABCA8O94911 1581 aa30.46■■■□□ 2.47
COL16A1-201ENST00000373667 ARID3CA6NKF2 412 aa30.43■■■□□ 2.46
COL16A1-201ENST00000373667 ATP1B4Q9UN42 357 aaPredicted RBP30.43■■■□□ 2.46
COL16A1-201ENST00000373667 FMN1Q68DA7 1419 aa30.42■■■□□ 2.46
COL16A1-201ENST00000373667 RAPGEF6Q8TEU7 1601 aa30.4■■■□□ 2.46
COL16A1-201ENST00000373667 TRHP20396 242 aaPredicted RBP30.38■■■□□ 2.45
COL16A1-201ENST00000373667 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.35■■■□□ 2.45
COL16A1-201ENST00000373667 HNRNPUL2Q1KMD3 747 aaKnown RBP30.35■■■□□ 2.45
COL16A1-201ENST00000373667 KDM5BQ9UGL1 1544 aa30.34■■■□□ 2.45
COL16A1-201ENST00000373667 ZCCHC11Q5TAX3 1644 aaKnown RBP30.32■■■□□ 2.44
COL16A1-201ENST00000373667 NUP153P49790 1475 aaKnown RBP30.28■■■□□ 2.44
COL16A1-201ENST00000373667 ATP10BO94823 1461 aa30.27■■■□□ 2.44
COL16A1-201ENST00000373667 MAPKBP1O60336 1514 aa30.26■■■□□ 2.43
COL16A1-201ENST00000373667 ASXL2Q76L83 1435 aa30.25■■■□□ 2.43
COL16A1-201ENST00000373667 HECW1Q76N89 1606 aa30.21■■■□□ 2.43
COL16A1-201ENST00000373667 CASKIN1Q8WXD9 1431 aa30.21■■■□□ 2.43
COL16A1-201ENST00000373667 PCF11O94913 1555 aaKnown RBP30.19■■■□□ 2.42
COL16A1-201ENST00000373667 FAM69CQ0P6D2 419 aa30.18■■■□□ 2.42
COL16A1-201ENST00000373667 KCNH8Q96L42 1107 aa30.18■■■□□ 2.42
COL16A1-201ENST00000373667 EPRSP07814 1512 aaKnown RBP30.14■■■□□ 2.42
COL16A1-201ENST00000373667 CDK13Q14004 1512 aaKnown RBP30.14■■■□□ 2.42
COL16A1-201ENST00000373667 PLEKHD1A6NEE1 506 aa30.14■■■□□ 2.42
COL16A1-201ENST00000373667 FYCO1Q9BQS8 1478 aa30.12■■■□□ 2.41
COL16A1-201ENST00000373667 ABCC10Q5T3U5 1492 aa30.12■■■□□ 2.41
COL16A1-201ENST00000373667 WDR7Q9Y4E6 1490 aa30.12■■■□□ 2.41
COL16A1-201ENST00000373667 CDK11AQ9UQ88 783 aaPredicted RBP30.09■■■□□ 2.41
COL16A1-201ENST00000373667 VPS8Q8N3P4 1428 aa30.08■■■□□ 2.41
COL16A1-201ENST00000373667 DIP2BQ9P265 1576 aa30.07■■■□□ 2.4
COL16A1-201ENST00000373667 KIF13AQ9H1H9 1805 aa30.06■■■□□ 2.4
COL16A1-201ENST00000373667 LRRIQ1Q96JM4 1722 aa30.05■■■□□ 2.4
COL16A1-201ENST00000373667 CCDC18Q5T9S5 1454 aa30.04■■■□□ 2.4
COL16A1-201ENST00000373667 GLI2P10070 1586 aa29.95■■■□□ 2.39
COL16A1-201ENST00000373667 TSPOAP1O95153 1857 aa29.91■■■□□ 2.38
COL16A1-201ENST00000373667 APLP2Q06481 763 aa29.91■■■□□ 2.38
COL16A1-201ENST00000373667 TROQ12816 1431 aaPredicted RBP29.89■■■□□ 2.38
COL16A1-201ENST00000373667 CD109Q6YHK3 1445 aa29.87■■■□□ 2.37
COL16A1-201ENST00000373667 MTUS2Q5JR59 1369 aa29.86■■■□□ 2.37
COL16A1-201ENST00000373667 MAGI3Q5TCQ9 1506 aa29.84■■■□□ 2.37
COL16A1-201ENST00000373667 MAP3K4Q9Y6R4 1608 aa29.83■■■□□ 2.37
COL16A1-201ENST00000373667 CFAP43Q8NDM7 1665 aa29.82■■■□□ 2.36
COL16A1-201ENST00000373667 ABCA9Q8IUA7 1624 aa29.81■■■□□ 2.36
COL16A1-201ENST00000373667 TIAM1Q13009 1591 aa29.8■■■□□ 2.36
COL16A1-201ENST00000373667 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.79■■■□□ 2.36
COL16A1-201ENST00000373667 KIF14Q15058 1648 aa29.78■■■□□ 2.36
COL16A1-201ENST00000373667 TTC37Q6PGP7 1564 aa29.73■■■□□ 2.35
COL16A1-201ENST00000373667 MAP3K1Q13233 1512 aa29.73■■■□□ 2.35
COL16A1-201ENST00000373667 KANK4Q5T7N3 995 aaPredicted RBP29.73■■■□□ 2.35
COL16A1-201ENST00000373667 PPRC1Q5VV67 1664 aaKnown RBP29.72■■■□□ 2.35
COL16A1-201ENST00000373667 TEX14Q8IWB6 1497 aa29.72■■■□□ 2.35
COL16A1-201ENST00000373667 EHBP1L1Q8N3D4 1523 aa29.71■■■□□ 2.35
COL16A1-201ENST00000373667 LRRC9Q6ZRR7 1453 aa29.69■■■□□ 2.34
COL16A1-201ENST00000373667 PLCH2O75038 1416 aa29.64■■■□□ 2.34
COL16A1-201ENST00000373667 MYO5CQ9NQX4 1742 aa29.62■■■□□ 2.33
COL16A1-201ENST00000373667 CCNB3Q8WWL7 1395 aa29.62■■■□□ 2.33
COL16A1-201ENST00000373667 EFCAB2Q5VUJ9 269 aa29.61■■■□□ 2.33
COL16A1-201ENST00000373667 SUPT6HQ7KZ85 1726 aaKnown RBP29.6■■■□□ 2.33
COL16A1-201ENST00000373667 FANCAO15360 1455 aa29.58■■■□□ 2.33
COL16A1-201ENST00000373667 NCOA2Q15596 1464 aa29.57■■■□□ 2.32
COL16A1-201ENST00000373667 ARHGAP5Q13017 1502 aa29.56■■■□□ 2.32
COL16A1-201ENST00000373667 NEO1Q92859 1461 aa29.55■■■□□ 2.32
COL16A1-201ENST00000373667 PPARGC1BQ86YN6 1023 aaKnown RBP29.55■■■□□ 2.32
COL16A1-201ENST00000373667 ZNF777Q9ULD5 760 aaPredicted RBP29.55■■■□□ 2.32
COL16A1-201ENST00000373667 KDM6BO15054 1643 aa29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms