RNA–Protein interactions for RNA: ENST00000373626.4

RPS4X-202, Transcript of ribosomal protein S4 X-linked, humanhuman

TSL 3

Gene RPS4X, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4X-202ENST00000373626 CEP162Q5TB80 1403 aa13.65□□□□□ -0.22
RPS4X-202ENST00000373626 FBLN2P98095 1184 aa13.64□□□□□ -0.23
RPS4X-202ENST00000373626 CLIP1P30622 1438 aa13.62□□□□□ -0.23
RPS4X-202ENST00000373626 CHD1O14646 1710 aa13.6□□□□□ -0.23
RPS4X-202ENST00000373626 IQGAP2Q13576 1575 aa13.6□□□□□ -0.23
RPS4X-202ENST00000373626 CEP170Q5SW79 1584 aa13.59□□□□□ -0.23
RPS4X-202ENST00000373626 EFCAB5A4FU69 1503 aa13.59□□□□□ -0.23
RPS4X-202ENST00000373626 UGGT2Q9NYU1 1516 aa13.58□□□□□ -0.24
RPS4X-202ENST00000373626 JPH4Q96JJ6 628 aa13.56□□□□□ -0.24
RPS4X-202ENST00000373626 ARHGAP35Q9NRY4 1499 aa13.55□□□□□ -0.24
RPS4X-202ENST00000373626 OSCARQ8IYS5 282 aa13.54□□□□□ -0.24
RPS4X-202ENST00000373626 SAMD9Q5K651 1589 aa13.54□□□□□ -0.24
RPS4X-202ENST00000373626 CLASP1Q7Z460 1538 aa13.51□□□□□ -0.25
RPS4X-202ENST00000373626 CARMIL2Q6F5E8 1435 aa13.5□□□□□ -0.25
RPS4X-202ENST00000373626 ARAP1Q96P48 1450 aa13.49□□□□□ -0.25
RPS4X-202ENST00000373626 VPS8Q8N3P4 1428 aa13.49□□□□□ -0.25
RPS4X-202ENST00000373626 SHROOM2Q13796 1616 aa13.49□□□□□ -0.25
RPS4X-202ENST00000373626 RANGAP1P46060 587 aaPredicted RBP13.48□□□□□ -0.25
RPS4X-202ENST00000373626 DISP1Q96F81 1524 aa13.48□□□□□ -0.25
RPS4X-202ENST00000373626 FMN1Q68DA7 1419 aa13.47□□□□□ -0.25
RPS4X-202ENST00000373626 KIAA0556O60303 1618 aa13.45□□□□□ -0.26
RPS4X-202ENST00000373626 PRG4Q92954 1404 aaPredicted RBP13.44□□□□□ -0.26
RPS4X-202ENST00000373626 FHOD3Q2V2M9 1422 aa13.42□□□□□ -0.26
RPS4X-202ENST00000373626 P3H3Q8IVL6 736 aa13.42□□□□□ -0.26
RPS4X-202ENST00000373626 CASKIN1Q8WXD9 1431 aa13.4□□□□□ -0.26
RPS4X-202ENST00000373626 MAP3K1Q13233 1512 aa13.39□□□□□ -0.27
RPS4X-202ENST00000373626 FYCO1Q9BQS8 1478 aa13.38□□□□□ -0.27
RPS4X-202ENST00000373626 APLP2Q06481 763 aa13.37□□□□□ -0.27
RPS4X-202ENST00000373626 PTPRGP23470 1445 aa13.36□□□□□ -0.27
RPS4X-202ENST00000373626 PCF11O94913 1555 aaKnown RBP13.31□□□□□ -0.28
RPS4X-202ENST00000373626 CCDC18Q5T9S5 1454 aa13.3□□□□□ -0.28
RPS4X-202ENST00000373626 ABCA8O94911 1581 aa13.3□□□□□ -0.28
RPS4X-202ENST00000373626 ERCC6L2Q5T890 1561 aa13.3□□□□□ -0.28
RPS4X-202ENST00000373626 HECW1Q76N89 1606 aa13.3□□□□□ -0.28
RPS4X-202ENST00000373626 RAPGEF6Q8TEU7 1601 aa13.3□□□□□ -0.28
RPS4X-202ENST00000373626 UACAQ9BZF9 1416 aa13.29□□□□□ -0.28
RPS4X-202ENST00000373626 UHRF1BP1LA0JNW5 1464 aa13.28□□□□□ -0.28
RPS4X-202ENST00000373626 PLB1Q6P1J6 1458 aa13.27□□□□□ -0.29
RPS4X-202ENST00000373626 TIAM1Q13009 1591 aa13.27□□□□□ -0.29
RPS4X-202ENST00000373626 EPRSP07814 1512 aaKnown RBP13.26□□□□□ -0.29
RPS4X-202ENST00000373626 ATP1B4Q9UN42 357 aaPredicted RBP13.26□□□□□ -0.29
RPS4X-202ENST00000373626 NUP153P49790 1475 aaKnown RBP13.25□□□□□ -0.29
RPS4X-202ENST00000373626 CDK11AQ9UQ88 783 aaPredicted RBP13.25□□□□□ -0.29
RPS4X-202ENST00000373626 CFAP43Q8NDM7 1665 aa13.24□□□□□ -0.29
RPS4X-202ENST00000373626 ARHGEF11O15085 1522 aa13.23□□□□□ -0.29
RPS4X-202ENST00000373626 ABCC2Q92887 1545 aa13.23□□□□□ -0.29
RPS4X-202ENST00000373626 LRRC9Q6ZRR7 1453 aa13.23□□□□□ -0.29
RPS4X-202ENST00000373626 TTBK1Q5TCY1 1321 aaPredicted RBP13.22□□□□□ -0.29
RPS4X-202ENST00000373626 LRRIQ1Q96JM4 1722 aa13.22□□□□□ -0.29
RPS4X-202ENST00000373626 KANK4Q5T7N3 995 aaPredicted RBP13.21□□□□□ -0.29
RPS4X-202ENST00000373626 ATP10BO94823 1461 aa13.21□□□□□ -0.3
RPS4X-202ENST00000373626 KDM5BQ9UGL1 1544 aa13.19□□□□□ -0.3
RPS4X-202ENST00000373626 MTUS2Q5JR59 1369 aa13.19□□□□□ -0.3
RPS4X-202ENST00000373626 RIMBP3CA6NJZ7 1639 aa13.17□□□□□ -0.3
RPS4X-202ENST00000373626 RIMBP3BA6NNM3 1639 aa13.17□□□□□ -0.3
RPS4X-202ENST00000373626 RIMBP3Q9UFD9 1639 aa13.17□□□□□ -0.3
RPS4X-202ENST00000373626 PLEKHD1A6NEE1 506 aa13.17□□□□□ -0.3
RPS4X-202ENST00000373626 EHBP1L1Q8N3D4 1523 aa13.17□□□□□ -0.3
RPS4X-202ENST00000373626 CDK13Q14004 1512 aaKnown RBP13.16□□□□□ -0.3
RPS4X-202ENST00000373626 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.15□□□□□ -0.3
RPS4X-202ENST00000373626 TRIM26Q12899 539 aaPredicted RBP13.15□□□□□ -0.3
RPS4X-202ENST00000373626 HNRNPUL2Q1KMD3 747 aaKnown RBP13.15□□□□□ -0.3
RPS4X-202ENST00000373626 TROQ12816 1431 aaPredicted RBP13.14□□□□□ -0.31
RPS4X-202ENST00000373626 ADCY10Q96PN6 1610 aa13.14□□□□□ -0.31
RPS4X-202ENST00000373626 NPM1P06748 294 aaKnown RBP eCLIP13.13□□□□□ -0.31
RPS4X-202ENST00000373626 PPARGC1BQ86YN6 1023 aaKnown RBP13.12□□□□□ -0.31
RPS4X-202ENST00000373626 DNAJC5Q9H3Z4 198 aa13.12□□□□□ -0.31
RPS4X-202ENST00000373626 SUPT6HQ7KZ85 1726 aaKnown RBP13.12□□□□□ -0.31
RPS4X-202ENST00000373626 MAGI3Q5TCQ9 1506 aa13.12□□□□□ -0.31
RPS4X-202ENST00000373626 CYB5RLQ6IPT4 315 aa13.11□□□□□ -0.31
RPS4X-202ENST00000373626 ZCCHC11Q5TAX3 1644 aaKnown RBP13.1□□□□□ -0.31
RPS4X-202ENST00000373626 NCOA2Q15596 1464 aa13.09□□□□□ -0.31
RPS4X-202ENST00000373626 ARID3CA6NKF2 412 aa13.08□□□□□ -0.32
RPS4X-202ENST00000373626 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.07□□□□□ -0.32
RPS4X-202ENST00000373626 RRBP1Q9P2E9 1410 aaKnown RBP13.07□□□□□ -0.32
RPS4X-202ENST00000373626 PHLDB1Q86UU1 1377 aa13.06□□□□□ -0.32
RPS4X-202ENST00000373626 MIA2Q96PC5 1412 aa13.05□□□□□ -0.32
RPS4X-202ENST00000373626 KIF14Q15058 1648 aa13.05□□□□□ -0.32
RPS4X-202ENST00000373626 MYOM3Q5VTT5 1437 aa13.05□□□□□ -0.32
RPS4X-202ENST00000373626 WDR7Q9Y4E6 1490 aa13.04□□□□□ -0.32
RPS4X-202ENST00000373626 ABCC10Q5T3U5 1492 aa13.04□□□□□ -0.32
RPS4X-202ENST00000373626 MAPKBP1O60336 1514 aa13.03□□□□□ -0.32
RPS4X-202ENST00000373626 CCNB3Q8WWL7 1395 aa13.03□□□□□ -0.32
RPS4X-202ENST00000373626 ASXL2Q76L83 1435 aa13.03□□□□□ -0.32
RPS4X-202ENST00000373626 FGD6Q6ZV73 1430 aa13.01□□□□□ -0.33
RPS4X-202ENST00000373626 GPATCH8Q9UKJ3 1502 aaKnown RBP13□□□□□ -0.33
RPS4X-202ENST00000373626 ITSN2Q9NZM3 1697 aa12.99□□□□□ -0.33
RPS4X-202ENST00000373626 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.98□□□□□ -0.33
RPS4X-202ENST00000373626 TCOF1Q13428 1488 aaKnown RBP12.98□□□□□ -0.33
RPS4X-202ENST00000373626 KCNH8Q96L42 1107 aa12.98□□□□□ -0.33
RPS4X-202ENST00000373626 ARAP3Q8WWN8 1544 aa12.98□□□□□ -0.33
RPS4X-202ENST00000373626 PCGF6Q9BYE7 350 aa12.97□□□□□ -0.33
RPS4X-202ENST00000373626 CFDP1Q9UEE9 299 aaPredicted RBP12.97□□□□□ -0.33
RPS4X-202ENST00000373626 PLCH2O75038 1416 aa12.96□□□□□ -0.33
RPS4X-202ENST00000373626 ABCA9Q8IUA7 1624 aa12.96□□□□□ -0.33
RPS4X-202ENST00000373626 CDC42BPAQ5VT25 1732 aa12.96□□□□□ -0.34
RPS4X-202ENST00000373626 PTPN23Q9H3S7 1636 aa12.95□□□□□ -0.34
RPS4X-202ENST00000373626 GLI2P10070 1586 aa12.94□□□□□ -0.34
RPS4X-202ENST00000373626 RSPH4AQ5TD94 716 aa12.94□□□□□ -0.34
RPS4X-202ENST00000373626 PREX2Q70Z35 1606 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms