RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 HNRNPUL2Q1KMD3 747 aaKnown RBP15.03■□□□□ -0
PGK1-201ENST00000373316 YTHDC1Q96MU7 727 aaKnown RBP15.02■□□□□ -0
PGK1-201ENST00000373316 KANK4Q5T7N3 995 aaPredicted RBP15.02□□□□□ -0.01
PGK1-201ENST00000373316 ARAP1Q96P48 1450 aa14.99□□□□□ -0.01
PGK1-201ENST00000373316 ITGAEP38570 1179 aa14.97□□□□□ -0.01
PGK1-201ENST00000373316 GAPVD1Q14C86 1478 aa14.97□□□□□ -0.01
PGK1-201ENST00000373316 ABCA10Q8WWZ4 1543 aa14.97□□□□□ -0.01
PGK1-201ENST00000373316 MRC2Q9UBG0 1479 aa14.96□□□□□ -0.01
PGK1-201ENST00000373316 ZNF316A6NFI3 1004 aaPredicted RBP14.96□□□□□ -0.01
PGK1-201ENST00000373316 FHOD3Q2V2M9 1422 aa14.93□□□□□ -0.02
PGK1-201ENST00000373316 ARHGAP35Q9NRY4 1499 aa14.92□□□□□ -0.02
PGK1-201ENST00000373316 VPS8Q8N3P4 1428 aa14.91□□□□□ -0.02
PGK1-201ENST00000373316 ERICH3Q5RHP9 1530 aa14.89□□□□□ -0.03
PGK1-201ENST00000373316 DAXXQ9UER7 740 aaPredicted RBP14.89□□□□□ -0.03
PGK1-201ENST00000373316 TARBP1Q13395 1621 aaKnown RBP14.87□□□□□ -0.03
PGK1-201ENST00000373316 CHMP7Q8WUX9 453 aaPredicted RBP14.84□□□□□ -0.03
PGK1-201ENST00000373316 ANP32CO43423 234 aa14.83□□□□□ -0.03
PGK1-201ENST00000373316 FAM50AQ14320 339 aaKnown RBP14.83□□□□□ -0.04
PGK1-201ENST00000373316 ABCA5Q8WWZ7 1642 aa14.82□□□□□ -0.04
PGK1-201ENST00000373316 WDR97A6NE52 1622 aa14.81□□□□□ -0.04
PGK1-201ENST00000373316 SNAPC4Q5SXM2 1469 aa14.8□□□□□ -0.04
PGK1-201ENST00000373316 WDR62O43379 1518 aa14.79□□□□□ -0.04
PGK1-201ENST00000373316 CDK11AQ9UQ88 783 aaPredicted RBP14.79□□□□□ -0.04
PGK1-201ENST00000373316 THOC2Q8NI27 1593 aaKnown RBP14.78□□□□□ -0.04
PGK1-201ENST00000373316 IFT140Q96RY7 1462 aa14.75□□□□□ -0.05
PGK1-201ENST00000373316 EIF4G3O43432 1585 aaKnown RBP14.74□□□□□ -0.05
PGK1-201ENST00000373316 PBRM1Q86U86 1689 aa14.73□□□□□ -0.05
PGK1-201ENST00000373316 GRIN2BQ13224 1484 aa14.73□□□□□ -0.05
PGK1-201ENST00000373316 TRIM52Q96A61 297 aa14.71□□□□□ -0.05
PGK1-201ENST00000373316 FHAD1B1AJZ9 1412 aa14.7□□□□□ -0.06
PGK1-201ENST00000373316 CUL7Q14999 1698 aa14.7□□□□□ -0.06
PGK1-201ENST00000373316 PCF11O94913 1555 aaKnown RBP14.68□□□□□ -0.06
PGK1-201ENST00000373316 ADAMTS12P58397 1594 aa14.66□□□□□ -0.06
PGK1-201ENST00000373316 RTL5Q5HYW3 569 aaPredicted RBP14.66□□□□□ -0.06
PGK1-201ENST00000373316 MYT1LQ9UL68 1186 aa14.64□□□□□ -0.07
PGK1-201ENST00000373316 CTTNBP2Q8WZ74 1663 aa14.64□□□□□ -0.07
PGK1-201ENST00000373316 PHLDB1Q86UU1 1377 aa14.63□□□□□ -0.07
PGK1-201ENST00000373316 GTF3C3Q9Y5Q9 886 aa14.62□□□□□ -0.07
PGK1-201ENST00000373316 GRIN2AQ12879 1464 aa14.61□□□□□ -0.07
PGK1-201ENST00000373316 JPH4Q96JJ6 628 aa14.61□□□□□ -0.07
PGK1-201ENST00000373316 TONSLQ96HA7 1378 aa14.59□□□□□ -0.07
PGK1-201ENST00000373316 POLR3GLQ9BT43 218 aa14.58□□□□□ -0.07
PGK1-201ENST00000373316 MTUS2Q5JR59 1369 aa14.57□□□□□ -0.08
PGK1-201ENST00000373316 IQGAP2Q13576 1575 aa14.57□□□□□ -0.08
PGK1-201ENST00000373316 CHIC2Q9UKJ5 165 aa14.57□□□□□ -0.08
PGK1-201ENST00000373316 CDK13Q14004 1512 aaKnown RBP14.57□□□□□ -0.08
PGK1-201ENST00000373316 NEUROD1Q13562 356 aa14.57□□□□□ -0.08
PGK1-201ENST00000373316 CEP170Q5SW79 1584 aa14.56□□□□□ -0.08
PGK1-201ENST00000373316 TIAM1Q13009 1591 aa14.56□□□□□ -0.08
PGK1-201ENST00000373316 LRRC9Q6ZRR7 1453 aa14.56□□□□□ -0.08
PGK1-201ENST00000373316 SYNJ2O15056 1496 aa14.54□□□□□ -0.08
PGK1-201ENST00000373316 CCNB3Q8WWL7 1395 aa14.53□□□□□ -0.08
PGK1-201ENST00000373316 PLB1Q6P1J6 1458 aa14.52□□□□□ -0.08
PGK1-201ENST00000373316 FMN1Q68DA7 1419 aa14.52□□□□□ -0.09
PGK1-201ENST00000373316 CASKIN1Q8WXD9 1431 aa14.52□□□□□ -0.09
PGK1-201ENST00000373316 LRRIQ1Q96JM4 1722 aa14.51□□□□□ -0.09
PGK1-201ENST00000373316 ZNF777Q9ULD5 760 aaPredicted RBP14.51□□□□□ -0.09
PGK1-201ENST00000373316 DISP1Q96F81 1524 aa14.51□□□□□ -0.09
PGK1-201ENST00000373316 TIMELESSQ9UNS1 1208 aa14.5□□□□□ -0.09
PGK1-201ENST00000373316 ZNF644Q9H582 1327 aaPredicted RBP14.49□□□□□ -0.09
PGK1-201ENST00000373316 SAMD9Q5K651 1589 aa14.49□□□□□ -0.09
PGK1-201ENST00000373316 MAGI1Q96QZ7 1491 aaPredicted RBP14.49□□□□□ -0.09
PGK1-201ENST00000373316 KIAA0586Q9BVV6 1533 aa14.49□□□□□ -0.09
PGK1-201ENST00000373316 EFCAB5A4FU69 1503 aa14.48□□□□□ -0.09
PGK1-201ENST00000373316 MAGI3Q5TCQ9 1506 aa14.48□□□□□ -0.09
PGK1-201ENST00000373316 FYCO1Q9BQS8 1478 aa14.47□□□□□ -0.09
PGK1-201ENST00000373316 RRP7BPQ9NSQ0 103 aa14.46□□□□□ -0.09
PGK1-201ENST00000373316 PRG4Q92954 1404 aaPredicted RBP14.45□□□□□ -0.1
PGK1-201ENST00000373316 ERCC6L2Q5T890 1561 aa14.44□□□□□ -0.1
PGK1-201ENST00000373316 KCNH8Q96L42 1107 aa14.43□□□□□ -0.1
PGK1-201ENST00000373316 CHD1O14646 1710 aa14.42□□□□□ -0.1
PGK1-201ENST00000373316 KIAA0556O60303 1618 aa14.42□□□□□ -0.1
PGK1-201ENST00000373316 RRBP1Q9P2E9 1410 aaKnown RBP14.41□□□□□ -0.1
PGK1-201ENST00000373316 EPRSP07814 1512 aaKnown RBP14.41□□□□□ -0.1
PGK1-201ENST00000373316 NCOA2Q15596 1464 aa14.41□□□□□ -0.1
PGK1-201ENST00000373316 NUP160Q12769 1436 aa14.39□□□□□ -0.11
PGK1-201ENST00000373316 NUP153P49790 1475 aaKnown RBP14.39□□□□□ -0.11
PGK1-201ENST00000373316 ANP32AP39687 249 aaKnown RBP14.39□□□□□ -0.11
PGK1-201ENST00000373316 RAB3GAP2Q9H2M9 1393 aa14.39□□□□□ -0.11
PGK1-201ENST00000373316 UGGT2Q9NYU1 1516 aa14.39□□□□□ -0.11
PGK1-201ENST00000373316 NEFMP07197 916 aa14.38□□□□□ -0.11
PGK1-201ENST00000373316 SIN3AQ96ST3 1273 aa14.38□□□□□ -0.11
PGK1-201ENST00000373316 PTPRKQ15262 1439 aa14.38□□□□□ -0.11
PGK1-201ENST00000373316 CFAP43Q8NDM7 1665 aa14.38□□□□□ -0.11
PGK1-201ENST00000373316 ZBTB47Q9UFB7 747 aaPredicted RBP14.35□□□□□ -0.11
PGK1-201ENST00000373316 FGD6Q6ZV73 1430 aa14.35□□□□□ -0.11
PGK1-201ENST00000373316 CARMIL2Q6F5E8 1435 aa14.34□□□□□ -0.11
PGK1-201ENST00000373316 FOXD1Q16676 465 aa14.34□□□□□ -0.11
PGK1-201ENST00000373316 PTPRGP23470 1445 aa14.34□□□□□ -0.11
PGK1-201ENST00000373316 DHX57Q6P158 1386 aaKnown RBP14.33□□□□□ -0.11
PGK1-201ENST00000373316 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.31□□□□□ -0.12
PGK1-201ENST00000373316 HECW1Q76N89 1606 aa14.31□□□□□ -0.12
PGK1-201ENST00000373316 PLEKHD1A6NEE1 506 aa14.29□□□□□ -0.12
PGK1-201ENST00000373316 CFDP1Q9UEE9 299 aaPredicted RBP14.29□□□□□ -0.12
PGK1-201ENST00000373316 RAPGEF6Q8TEU7 1601 aa14.29□□□□□ -0.12
PGK1-201ENST00000373316 MYOM3Q5VTT5 1437 aa14.29□□□□□ -0.12
PGK1-201ENST00000373316 SLC4A1APQ9BWU0 796 aaKnown RBP14.29□□□□□ -0.12
PGK1-201ENST00000373316 HIRIP3Q9BW71 556 aaPredicted RBP14.29□□□□□ -0.12
PGK1-201ENST00000373316 MAP3K1Q13233 1512 aa14.28□□□□□ -0.12
PGK1-201ENST00000373316 TSPY4P0CV99 314 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms