RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 KIAA0586Q9BVV6 1533 aa25.84■■□□□ 1.73
C9orf78-201ENST00000372447 GOLGA3Q08378 1498 aa25.82■■□□□ 1.72
C9orf78-201ENST00000372447 DNAJC5Q9H3Z4 198 aa25.8■■□□□ 1.72
C9orf78-201ENST00000372447 UBTFP17480 764 aaKnown RBP25.78■■□□□ 1.72
C9orf78-201ENST00000372447 JPH4Q96JJ6 628 aa25.77■■□□□ 1.72
C9orf78-201ENST00000372447 IQGAP2Q13576 1575 aa25.73■■□□□ 1.71
C9orf78-201ENST00000372447 CTTNBP2Q8WZ74 1663 aa25.71■■□□□ 1.71
C9orf78-201ENST00000372447 SHROOM2Q13796 1616 aa25.69■■□□□ 1.7
C9orf78-201ENST00000372447 PRG4Q92954 1404 aaPredicted RBP25.66■■□□□ 1.7
C9orf78-201ENST00000372447 ARHGEF11O15085 1522 aa25.63■■□□□ 1.69
C9orf78-201ENST00000372447 RANGAP1P46060 587 aaPredicted RBP25.61■■□□□ 1.69
C9orf78-201ENST00000372447 UGGT2Q9NYU1 1516 aa25.61■■□□□ 1.69
C9orf78-201ENST00000372447 ERCC6L2Q5T890 1561 aa25.6■■□□□ 1.69
C9orf78-201ENST00000372447 TNIKQ9UKE5 1360 aa25.6■■□□□ 1.69
C9orf78-201ENST00000372447 RIMBP3CA6NJZ7 1639 aa25.56■■□□□ 1.68
C9orf78-201ENST00000372447 RIMBP3BA6NNM3 1639 aa25.56■■□□□ 1.68
C9orf78-201ENST00000372447 RIMBP3Q9UFD9 1639 aa25.56■■□□□ 1.68
C9orf78-201ENST00000372447 DISP1Q96F81 1524 aa25.55■■□□□ 1.68
C9orf78-201ENST00000372447 CARMIL2Q6F5E8 1435 aa25.53■■□□□ 1.68
C9orf78-201ENST00000372447 P3H3Q8IVL6 736 aa25.49■■□□□ 1.67
C9orf78-201ENST00000372447 KIAA0556O60303 1618 aa25.47■■□□□ 1.67
C9orf78-201ENST00000372447 ARAP1Q96P48 1450 aa25.46■■□□□ 1.67
C9orf78-201ENST00000372447 SAMD9Q5K651 1589 aa25.45■■□□□ 1.66
C9orf78-201ENST00000372447 CYB5RLQ6IPT4 315 aa25.44■■□□□ 1.66
C9orf78-201ENST00000372447 TTBK1Q5TCY1 1321 aaPredicted RBP25.44■■□□□ 1.66
C9orf78-201ENST00000372447 PTPRGP23470 1445 aa25.41■■□□□ 1.66
C9orf78-201ENST00000372447 ARHGAP35Q9NRY4 1499 aa25.4■■□□□ 1.66
C9orf78-201ENST00000372447 EFCAB5A4FU69 1503 aa25.4■■□□□ 1.66
C9orf78-201ENST00000372447 CLIP1P30622 1438 aa25.39■■□□□ 1.65
C9orf78-201ENST00000372447 CEP162Q5TB80 1403 aa25.38■■□□□ 1.65
C9orf78-201ENST00000372447 FHOD3Q2V2M9 1422 aa25.37■■□□□ 1.65
C9orf78-201ENST00000372447 PCGF6Q9BYE7 350 aa25.24■■□□□ 1.63
C9orf78-201ENST00000372447 PLB1Q6P1J6 1458 aa25.24■■□□□ 1.63
C9orf78-201ENST00000372447 UACAQ9BZF9 1416 aa25.24■■□□□ 1.63
C9orf78-201ENST00000372447 FMN1Q68DA7 1419 aa25.19■■□□□ 1.62
C9orf78-201ENST00000372447 ABCA8O94911 1581 aa25.18■■□□□ 1.62
C9orf78-201ENST00000372447 ADCY10Q96PN6 1610 aa25.16■■□□□ 1.62
C9orf78-201ENST00000372447 UHRF1BP1LA0JNW5 1464 aa25.16■■□□□ 1.62
C9orf78-201ENST00000372447 ABCC2Q92887 1545 aa25.15■■□□□ 1.62
C9orf78-201ENST00000372447 RAPGEF6Q8TEU7 1601 aa25.11■■□□□ 1.61
C9orf78-201ENST00000372447 TRIM26Q12899 539 aaPredicted RBP25.1■■□□□ 1.61
C9orf78-201ENST00000372447 ARID3CA6NKF2 412 aa25.08■■□□□ 1.61
C9orf78-201ENST00000372447 NPM1P06748 294 aaKnown RBP eCLIP25.08■■□□□ 1.61
C9orf78-201ENST00000372447 ATP1B4Q9UN42 357 aaPredicted RBP25.08■■□□□ 1.61
C9orf78-201ENST00000372447 NUP153P49790 1475 aaKnown RBP25.07■■□□□ 1.6
C9orf78-201ENST00000372447 KDM5BQ9UGL1 1544 aa25.06■■□□□ 1.6
C9orf78-201ENST00000372447 CASKIN1Q8WXD9 1431 aa25.05■■□□□ 1.6
C9orf78-201ENST00000372447 VPS8Q8N3P4 1428 aa25.03■■□□□ 1.6
C9orf78-201ENST00000372447 PCF11O94913 1555 aaKnown RBP25.03■■□□□ 1.6
C9orf78-201ENST00000372447 ATP10BO94823 1461 aa25.02■■□□□ 1.6
C9orf78-201ENST00000372447 FYCO1Q9BQS8 1478 aa24.99■■□□□ 1.59
C9orf78-201ENST00000372447 HECW1Q76N89 1606 aa24.99■■□□□ 1.59
C9orf78-201ENST00000372447 ZCCHC11Q5TAX3 1644 aaKnown RBP24.98■■□□□ 1.59
C9orf78-201ENST00000372447 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.98■■□□□ 1.59
C9orf78-201ENST00000372447 HNRNPUL2Q1KMD3 747 aaKnown RBP24.98■■□□□ 1.59
C9orf78-201ENST00000372447 EPRSP07814 1512 aaKnown RBP24.96■■□□□ 1.59
C9orf78-201ENST00000372447 CDK13Q14004 1512 aaKnown RBP24.94■■□□□ 1.58
C9orf78-201ENST00000372447 MAPKBP1O60336 1514 aa24.92■■□□□ 1.58
C9orf78-201ENST00000372447 ASXL2Q76L83 1435 aa24.91■■□□□ 1.58
C9orf78-201ENST00000372447 LRRIQ1Q96JM4 1722 aa24.91■■□□□ 1.58
C9orf78-201ENST00000372447 CCDC18Q5T9S5 1454 aa24.87■■□□□ 1.57
C9orf78-201ENST00000372447 PLEKHD1A6NEE1 506 aa24.86■■□□□ 1.57
C9orf78-201ENST00000372447 HRCP23327 699 aa24.85■■□□□ 1.57
C9orf78-201ENST00000372447 WDR7Q9Y4E6 1490 aa24.84■■□□□ 1.57
C9orf78-201ENST00000372447 CDK11AQ9UQ88 783 aaPredicted RBP24.83■■□□□ 1.57
C9orf78-201ENST00000372447 KCNH8Q96L42 1107 aa24.82■■□□□ 1.56
C9orf78-201ENST00000372447 ABCC10Q5T3U5 1492 aa24.77■■□□□ 1.56
C9orf78-201ENST00000372447 TRHP20396 242 aaPredicted RBP24.77■■□□□ 1.56
C9orf78-201ENST00000372447 APLP2Q06481 763 aa24.77■■□□□ 1.56
C9orf78-201ENST00000372447 FAM69CQ0P6D2 419 aa24.76■■□□□ 1.55
C9orf78-201ENST00000372447 MAGI3Q5TCQ9 1506 aa24.75■■□□□ 1.55
C9orf78-201ENST00000372447 TIAM1Q13009 1591 aa24.75■■□□□ 1.55
C9orf78-201ENST00000372447 TROQ12816 1431 aaPredicted RBP24.74■■□□□ 1.55
C9orf78-201ENST00000372447 PPARGC1BQ86YN6 1023 aaKnown RBP24.73■■□□□ 1.55
C9orf78-201ENST00000372447 MAP3K1Q13233 1512 aa24.73■■□□□ 1.55
C9orf78-201ENST00000372447 DIP2BQ9P265 1576 aa24.72■■□□□ 1.55
C9orf78-201ENST00000372447 KANK4Q5T7N3 995 aaPredicted RBP24.72■■□□□ 1.55
C9orf78-201ENST00000372447 MTUS2Q5JR59 1369 aa24.71■■□□□ 1.55
C9orf78-201ENST00000372447 CFAP43Q8NDM7 1665 aa24.71■■□□□ 1.55
C9orf78-201ENST00000372447 LRRC9Q6ZRR7 1453 aa24.66■■□□□ 1.54
C9orf78-201ENST00000372447 GLI2P10070 1586 aa24.66■■□□□ 1.54
C9orf78-201ENST00000372447 KIF13AQ9H1H9 1805 aa24.66■■□□□ 1.54
C9orf78-201ENST00000372447 KIF14Q15058 1648 aa24.63■■□□□ 1.53
C9orf78-201ENST00000372447 EHBP1L1Q8N3D4 1523 aa24.63■■□□□ 1.53
C9orf78-201ENST00000372447 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.62■■□□□ 1.53
C9orf78-201ENST00000372447 ABCA9Q8IUA7 1624 aa24.6■■□□□ 1.53
C9orf78-201ENST00000372447 CD109Q6YHK3 1445 aa24.58■■□□□ 1.53
C9orf78-201ENST00000372447 TTC37Q6PGP7 1564 aa24.57■■□□□ 1.52
C9orf78-201ENST00000372447 MAP3K4Q9Y6R4 1608 aa24.56■■□□□ 1.52
C9orf78-201ENST00000372447 NCOA2Q15596 1464 aa24.53■■□□□ 1.52
C9orf78-201ENST00000372447 SUPT6HQ7KZ85 1726 aaKnown RBP24.51■■□□□ 1.51
C9orf78-201ENST00000372447 TSPOAP1O95153 1857 aa24.5■■□□□ 1.51
C9orf78-201ENST00000372447 PLCH2O75038 1416 aa24.49■■□□□ 1.51
C9orf78-201ENST00000372447 CCNB3Q8WWL7 1395 aa24.48■■□□□ 1.51
C9orf78-201ENST00000372447 GPATCH8Q9UKJ3 1502 aaKnown RBP24.47■■□□□ 1.51
C9orf78-201ENST00000372447 PPRC1Q5VV67 1664 aaKnown RBP24.46■■□□□ 1.51
C9orf78-201ENST00000372447 MYO5CQ9NQX4 1742 aa24.43■■□□□ 1.5
C9orf78-201ENST00000372447 PHLDB1Q86UU1 1377 aa24.42■■□□□ 1.5
C9orf78-201ENST00000372447 CDC42BPAQ5VT25 1732 aa24.42■■□□□ 1.5
C9orf78-201ENST00000372447 EFCAB2Q5VUJ9 269 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms