RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 TIAM1Q13009 1591 aa26.84■■□□□ 1.89
CD40-201ENST00000372276 RAD54L2Q9Y4B4 1467 aa26.84■■□□□ 1.89
CD40-201ENST00000372276 WDR97A6NE52 1622 aa26.82■■□□□ 1.88
CD40-201ENST00000372276 ZNF316A6NFI3 1004 aaPredicted RBP26.82■■□□□ 1.88
CD40-201ENST00000372276 DIEXFQ68CQ4 756 aaKnown RBP26.81■■□□□ 1.88
CD40-201ENST00000372276 CCNB3Q8WWL7 1395 aa26.81■■□□□ 1.88
CD40-201ENST00000372276 AQRO60306 1485 aaKnown RBP eCLIP26.77■■□□□ 1.88
CD40-201ENST00000372276 CTTNBP2Q8WZ74 1663 aa26.76■■□□□ 1.87
CD40-201ENST00000372276 ABCA5Q8WWZ7 1642 aa26.72■■□□□ 1.87
CD40-201ENST00000372276 LRRC9Q6ZRR7 1453 aa26.72■■□□□ 1.87
CD40-201ENST00000372276 CFAP43Q8NDM7 1665 aa26.72■■□□□ 1.87
CD40-201ENST00000372276 FYCO1Q9BQS8 1478 aa26.71■■□□□ 1.87
CD40-201ENST00000372276 DHX57Q6P158 1386 aaKnown RBP26.66■■□□□ 1.86
CD40-201ENST00000372276 CASKIN1Q8WXD9 1431 aa26.66■■□□□ 1.86
CD40-201ENST00000372276 FMN1Q68DA7 1419 aa26.66■■□□□ 1.86
CD40-201ENST00000372276 GAPVD1Q14C86 1478 aa26.65■■□□□ 1.86
CD40-201ENST00000372276 PCF11O94913 1555 aaKnown RBP26.62■■□□□ 1.85
CD40-201ENST00000372276 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.58■■□□□ 1.85
CD40-201ENST00000372276 FHOD3Q2V2M9 1422 aa26.54■■□□□ 1.84
CD40-201ENST00000372276 TARBP1Q13395 1621 aaKnown RBP26.53■■□□□ 1.84
CD40-201ENST00000372276 IFT140Q96RY7 1462 aa26.53■■□□□ 1.84
CD40-201ENST00000372276 SAMD9Q5K651 1589 aa26.53■■□□□ 1.84
CD40-201ENST00000372276 CENPBP07199 599 aaPredicted RBP26.52■■□□□ 1.84
CD40-201ENST00000372276 TDRD9Q8NDG6 1382 aaKnown RBP26.52■■□□□ 1.84
CD40-201ENST00000372276 PHLDB1Q86UU1 1377 aa26.46■■□□□ 1.83
CD40-201ENST00000372276 SETD5Q9C0A6 1442 aa26.46■■□□□ 1.83
CD40-201ENST00000372276 P3H3Q8IVL6 736 aa26.44■■□□□ 1.82
CD40-201ENST00000372276 SNAPC4Q5SXM2 1469 aa26.43■■□□□ 1.82
CD40-201ENST00000372276 RAB3GAP2Q9H2M9 1393 aa26.4■■□□□ 1.82
CD40-201ENST00000372276 ACIN1Q9UKV3 1341 aaKnown RBP26.39■■□□□ 1.81
CD40-201ENST00000372276 PBRM1Q86U86 1689 aa26.39■■□□□ 1.81
CD40-201ENST00000372276 ATP1B4Q9UN42 357 aaPredicted RBP26.38■■□□□ 1.81
CD40-201ENST00000372276 ZNF608Q9ULD9 1512 aaPredicted RBP26.38■■□□□ 1.81
CD40-201ENST00000372276 GRIN2BQ13224 1484 aa26.34■■□□□ 1.81
CD40-201ENST00000372276 ITGAEP38570 1179 aa26.32■■□□□ 1.8
CD40-201ENST00000372276 FAM50AQ14320 339 aaKnown RBP26.32■■□□□ 1.8
CD40-201ENST00000372276 TIMELESSQ9UNS1 1208 aa26.32■■□□□ 1.8
CD40-201ENST00000372276 MTUS2Q5JR59 1369 aa26.32■■□□□ 1.8
CD40-201ENST00000372276 CCDC18Q5T9S5 1454 aa26.32■■□□□ 1.8
CD40-201ENST00000372276 ADAMTS12P58397 1594 aa26.3■■□□□ 1.8
CD40-201ENST00000372276 FGD6Q6ZV73 1430 aa26.28■■□□□ 1.8
CD40-201ENST00000372276 EHBP1L1Q8N3D4 1523 aa26.28■■□□□ 1.8
CD40-201ENST00000372276 EIF4G3O43432 1585 aaKnown RBP26.27■■□□□ 1.8
CD40-201ENST00000372276 IQGAP2Q13576 1575 aa26.26■■□□□ 1.79
CD40-201ENST00000372276 SCAF1Q9H7N4 1312 aaKnown RBP26.26■■□□□ 1.79
CD40-201ENST00000372276 SUPT6HQ7KZ85 1726 aaKnown RBP26.25■■□□□ 1.79
CD40-201ENST00000372276 MAPKBP1O60336 1514 aa26.23■■□□□ 1.79
CD40-201ENST00000372276 HECW1Q76N89 1606 aa26.22■■□□□ 1.79
CD40-201ENST00000372276 MYOM3Q5VTT5 1437 aa26.19■■□□□ 1.78
CD40-201ENST00000372276 UGGT2Q9NYU1 1516 aa26.18■■□□□ 1.78
CD40-201ENST00000372276 NCOA2Q15596 1464 aa26.17■■□□□ 1.78
CD40-201ENST00000372276 NEUROD1Q13562 356 aa26.17■■□□□ 1.78
CD40-201ENST00000372276 LRRIQ1Q96JM4 1722 aa26.17■■□□□ 1.78
CD40-201ENST00000372276 MIER1Q8N108 512 aa26.14■■□□□ 1.78
CD40-201ENST00000372276 ARHGEF11O15085 1522 aa26.14■■□□□ 1.78
CD40-201ENST00000372276 HFM1A2PYH4 1435 aa26.12■■□□□ 1.77
CD40-201ENST00000372276 KIAA0586Q9BVV6 1533 aa26.1■■□□□ 1.77
CD40-201ENST00000372276 TCOF1Q13428 1488 aaKnown RBP26.06■■□□□ 1.76
CD40-201ENST00000372276 EPRSP07814 1512 aaKnown RBP26.05■■□□□ 1.76
CD40-201ENST00000372276 PTPN23Q9H3S7 1636 aa26.04■■□□□ 1.76
CD40-201ENST00000372276 MIA2Q96PC5 1412 aa26.04■■□□□ 1.76
CD40-201ENST00000372276 UACAQ9BZF9 1416 aa26.02■■□□□ 1.76
CD40-201ENST00000372276 MAGI1Q96QZ7 1491 aaPredicted RBP26.02■■□□□ 1.76
CD40-201ENST00000372276 AKNAQ7Z591 1439 aa26.01■■□□□ 1.75
CD40-201ENST00000372276 GRIN2AQ12879 1464 aa25.98■■□□□ 1.75
CD40-201ENST00000372276 DNAJC5Q9H3Z4 198 aa25.97■■□□□ 1.75
CD40-201ENST00000372276 KIAA0556O60303 1618 aa25.96■■□□□ 1.75
CD40-201ENST00000372276 PELP1Q8IZL8 1130 aaKnown RBP25.95■■□□□ 1.74
CD40-201ENST00000372276 NAIPQ13075 1403 aa25.95■■□□□ 1.74
CD40-201ENST00000372276 MAGI3Q5TCQ9 1506 aa25.94■■□□□ 1.74
CD40-201ENST00000372276 OSCARQ8IYS5 282 aa25.94■■□□□ 1.74
CD40-201ENST00000372276 PTPRKQ15262 1439 aa25.92■■□□□ 1.74
CD40-201ENST00000372276 SYNJ2O15056 1496 aa25.91■■□□□ 1.74
CD40-201ENST00000372276 CDK11AQ9UQ88 783 aaPredicted RBP25.91■■□□□ 1.74
CD40-201ENST00000372276 GTF3C3Q9Y5Q9 886 aa25.91■■□□□ 1.74
CD40-201ENST00000372276 DISP1Q96F81 1524 aa25.9■■□□□ 1.74
CD40-201ENST00000372276 GCC2Q8IWJ2 1684 aa25.88■■□□□ 1.73
CD40-201ENST00000372276 FBLN2P98095 1184 aa25.88■■□□□ 1.73
CD40-201ENST00000372276 PPP1R15AO75807 674 aaPredicted RBP25.88■■□□□ 1.73
CD40-201ENST00000372276 CHD1O14646 1710 aa25.87■■□□□ 1.73
CD40-201ENST00000372276 CHMP7Q8WUX9 453 aaPredicted RBP25.87■■□□□ 1.73
CD40-201ENST00000372276 SIN3AQ96ST3 1273 aa25.86■■□□□ 1.73
CD40-201ENST00000372276 RAPGEF6Q8TEU7 1601 aa25.86■■□□□ 1.73
CD40-201ENST00000372276 TONSLQ96HA7 1378 aa25.83■■□□□ 1.73
CD40-201ENST00000372276 CDK13Q14004 1512 aaKnown RBP25.83■■□□□ 1.72
CD40-201ENST00000372276 YTHDC1Q96MU7 727 aaKnown RBP25.82■■□□□ 1.72
CD40-201ENST00000372276 CARMIL2Q6F5E8 1435 aa25.8■■□□□ 1.72
CD40-201ENST00000372276 ROCK1Q13464 1354 aa25.8■■□□□ 1.72
CD40-201ENST00000372276 NUP153P49790 1475 aaKnown RBP25.77■■□□□ 1.72
CD40-201ENST00000372276 NUP160Q12769 1436 aa25.75■■□□□ 1.71
CD40-201ENST00000372276 CEP170Q5SW79 1584 aa25.72■■□□□ 1.71
CD40-201ENST00000372276 TROQ12816 1431 aaPredicted RBP25.7■■□□□ 1.7
CD40-201ENST00000372276 DNMT1P26358 1616 aaKnown RBP25.7■■□□□ 1.7
CD40-201ENST00000372276 ITSN2Q9NZM3 1697 aa25.68■■□□□ 1.7
CD40-201ENST00000372276 DAPK1P53355 1430 aa25.67■■□□□ 1.7
CD40-201ENST00000372276 ADCY10Q96PN6 1610 aa25.67■■□□□ 1.7
CD40-201ENST00000372276 CLASP1Q7Z460 1538 aa25.65■■□□□ 1.7
CD40-201ENST00000372276 RRP7BPQ9NSQ0 103 aa25.65■■□□□ 1.7
CD40-201ENST00000372276 JPH4Q96JJ6 628 aa25.63■■□□□ 1.69
CD40-201ENST00000372276 ABCC5O15440 1437 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms