RNA–Protein interactions for RNA: ENST00000372273.7

TMEM254-201, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-201ENST00000372273 PRXQ9BXM0 1461 aa15.79■□□□□ 0.12
TMEM254-201ENST00000372273 RANGAP1P46060 587 aaPredicted RBP15.77■□□□□ 0.11
TMEM254-201ENST00000372273 ERCC6L2Q5T890 1561 aa15.76■□□□□ 0.11
TMEM254-201ENST00000372273 TTBK1Q5TCY1 1321 aaPredicted RBP15.76■□□□□ 0.11
TMEM254-201ENST00000372273 RIMBP3CA6NJZ7 1639 aa15.76■□□□□ 0.11
TMEM254-201ENST00000372273 RIMBP3BA6NNM3 1639 aa15.76■□□□□ 0.11
TMEM254-201ENST00000372273 RIMBP3Q9UFD9 1639 aa15.76■□□□□ 0.11
TMEM254-201ENST00000372273 EEA1Q15075 1411 aa15.73■□□□□ 0.11
TMEM254-201ENST00000372273 PRG4Q92954 1404 aaPredicted RBP15.72■□□□□ 0.11
TMEM254-201ENST00000372273 KIAA0586Q9BVV6 1533 aa15.72■□□□□ 0.11
TMEM254-201ENST00000372273 ARAP1Q96P48 1450 aa15.71■□□□□ 0.1
TMEM254-201ENST00000372273 UBTFP17480 764 aaKnown RBP15.67■□□□□ 0.1
TMEM254-201ENST00000372273 P3H3Q8IVL6 736 aa15.65■□□□□ 0.1
TMEM254-201ENST00000372273 SHROOM2Q13796 1616 aa15.63■□□□□ 0.09
TMEM254-201ENST00000372273 IQGAP2Q13576 1575 aa15.63■□□□□ 0.09
TMEM254-201ENST00000372273 LOC105371045A0A1W2PR82 267 aa15.61■□□□□ 0.09
TMEM254-201ENST00000372273 DISP1Q96F81 1524 aa15.58■□□□□ 0.08
TMEM254-201ENST00000372273 KIF21BO75037 1637 aa15.57■□□□□ 0.08
TMEM254-201ENST00000372273 GOLGA3Q08378 1498 aa15.55■□□□□ 0.08
TMEM254-201ENST00000372273 CARMIL2Q6F5E8 1435 aa15.54■□□□□ 0.08
TMEM254-201ENST00000372273 PTPRGP23470 1445 aa15.54■□□□□ 0.08
TMEM254-201ENST00000372273 UGGT2Q9NYU1 1516 aa15.53■□□□□ 0.08
TMEM254-201ENST00000372273 CTTNBP2Q8WZ74 1663 aa15.52■□□□□ 0.08
TMEM254-201ENST00000372273 TNIKQ9UKE5 1360 aa15.51■□□□□ 0.07
TMEM254-201ENST00000372273 ARID3CA6NKF2 412 aa15.5■□□□□ 0.07
TMEM254-201ENST00000372273 KIAA0556O60303 1618 aa15.48■□□□□ 0.07
TMEM254-201ENST00000372273 FHOD3Q2V2M9 1422 aa15.47■□□□□ 0.07
TMEM254-201ENST00000372273 PLB1Q6P1J6 1458 aa15.45■□□□□ 0.06
TMEM254-201ENST00000372273 TRHP20396 242 aaPredicted RBP15.44■□□□□ 0.06
TMEM254-201ENST00000372273 ADCY10Q96PN6 1610 aa15.41■□□□□ 0.06
TMEM254-201ENST00000372273 UACAQ9BZF9 1416 aa15.4■□□□□ 0.06
TMEM254-201ENST00000372273 NPM1P06748 294 aaKnown RBP eCLIP15.4■□□□□ 0.06
TMEM254-201ENST00000372273 ARHGAP35Q9NRY4 1499 aa15.39■□□□□ 0.05
TMEM254-201ENST00000372273 SAMD9Q5K651 1589 aa15.39■□□□□ 0.05
TMEM254-201ENST00000372273 ATP1B4Q9UN42 357 aaPredicted RBP15.37■□□□□ 0.05
TMEM254-201ENST00000372273 CLIP1P30622 1438 aa15.34■□□□□ 0.05
TMEM254-201ENST00000372273 ABCC2Q92887 1545 aa15.33■□□□□ 0.04
TMEM254-201ENST00000372273 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.32■□□□□ 0.04
TMEM254-201ENST00000372273 HNRNPUL2Q1KMD3 747 aaKnown RBP15.32■□□□□ 0.04
TMEM254-201ENST00000372273 CEP162Q5TB80 1403 aa15.32■□□□□ 0.04
TMEM254-201ENST00000372273 EFCAB5A4FU69 1503 aa15.3■□□□□ 0.04
TMEM254-201ENST00000372273 ABCA8O94911 1581 aa15.3■□□□□ 0.04
TMEM254-201ENST00000372273 UHRF1BP1LA0JNW5 1464 aa15.3■□□□□ 0.04
TMEM254-201ENST00000372273 FAM69CQ0P6D2 419 aa15.29■□□□□ 0.04
TMEM254-201ENST00000372273 KCNH8Q96L42 1107 aa15.29■□□□□ 0.04
TMEM254-201ENST00000372273 ASXL2Q76L83 1435 aa15.28■□□□□ 0.04
TMEM254-201ENST00000372273 KDM5BQ9UGL1 1544 aa15.27■□□□□ 0.04
TMEM254-201ENST00000372273 ATP10BO94823 1461 aa15.27■□□□□ 0.03
TMEM254-201ENST00000372273 NUP153P49790 1475 aaKnown RBP15.27■□□□□ 0.03
TMEM254-201ENST00000372273 RAPGEF6Q8TEU7 1601 aa15.23■□□□□ 0.03
TMEM254-201ENST00000372273 FMN1Q68DA7 1419 aa15.23■□□□□ 0.03
TMEM254-201ENST00000372273 ZCCHC11Q5TAX3 1644 aaKnown RBP15.23■□□□□ 0.03
TMEM254-201ENST00000372273 MAPKBP1O60336 1514 aa15.22■□□□□ 0.03
TMEM254-201ENST00000372273 CDK13Q14004 1512 aaKnown RBP15.21■□□□□ 0.02
TMEM254-201ENST00000372273 ABCC10Q5T3U5 1492 aa15.2■□□□□ 0.02
TMEM254-201ENST00000372273 WDR7Q9Y4E6 1490 aa15.17■□□□□ 0.02
TMEM254-201ENST00000372273 PLEKHD1A6NEE1 506 aa15.16■□□□□ 0.02
TMEM254-201ENST00000372273 PCF11O94913 1555 aaKnown RBP15.16■□□□□ 0.02
TMEM254-201ENST00000372273 EPRSP07814 1512 aaKnown RBP15.15■□□□□ 0.02
TMEM254-201ENST00000372273 DIP2BQ9P265 1576 aa15.15■□□□□ 0.02
TMEM254-201ENST00000372273 CASKIN1Q8WXD9 1431 aa15.14■□□□□ 0.01
TMEM254-201ENST00000372273 KIF13AQ9H1H9 1805 aa15.12■□□□□ 0.01
TMEM254-201ENST00000372273 HECW1Q76N89 1606 aa15.1■□□□□ 0.01
TMEM254-201ENST00000372273 LRRIQ1Q96JM4 1722 aa15.09■□□□□ 0.01
TMEM254-201ENST00000372273 FYCO1Q9BQS8 1478 aa15.08■□□□□ 0
TMEM254-201ENST00000372273 VPS8Q8N3P4 1428 aa15.07■□□□□ 0
TMEM254-201ENST00000372273 TSPOAP1O95153 1857 aa15.07■□□□□ 0
TMEM254-201ENST00000372273 CDK11AQ9UQ88 783 aaPredicted RBP15.07■□□□□ 0
TMEM254-201ENST00000372273 CD109Q6YHK3 1445 aa15.06■□□□□ 0
TMEM254-201ENST00000372273 MAGI3Q5TCQ9 1506 aa15.06■□□□□ 0
TMEM254-201ENST00000372273 KANK4Q5T7N3 995 aaPredicted RBP15.04■□□□□ -0
TMEM254-201ENST00000372273 GLI2P10070 1586 aa15.02■□□□□ -0
TMEM254-201ENST00000372273 PPARGC1BQ86YN6 1023 aaKnown RBP15.01□□□□□ -0.01
TMEM254-201ENST00000372273 TROQ12816 1431 aaPredicted RBP15.01□□□□□ -0.01
TMEM254-201ENST00000372273 CCDC18Q5T9S5 1454 aa15□□□□□ -0.01
TMEM254-201ENST00000372273 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15□□□□□ -0.01
TMEM254-201ENST00000372273 KIF14Q15058 1648 aa15□□□□□ -0.01
TMEM254-201ENST00000372273 MTUS2Q5JR59 1369 aa15□□□□□ -0.01
TMEM254-201ENST00000372273 COL17A1Q9UMD9 1497 aaPredicted RBP14.99□□□□□ -0.01
TMEM254-201ENST00000372273 MAP3K4Q9Y6R4 1608 aa14.99□□□□□ -0.01
TMEM254-201ENST00000372273 TTC37Q6PGP7 1564 aa14.98□□□□□ -0.01
TMEM254-201ENST00000372273 PPRC1Q5VV67 1664 aaKnown RBP14.98□□□□□ -0.01
TMEM254-201ENST00000372273 RAPGEF3O95398 923 aa14.96□□□□□ -0.01
TMEM254-201ENST00000372273 ABCA9Q8IUA7 1624 aa14.96□□□□□ -0.02
TMEM254-201ENST00000372273 APLP2Q06481 763 aa14.94□□□□□ -0.02
TMEM254-201ENST00000372273 ZNF777Q9ULD5 760 aaPredicted RBP14.94□□□□□ -0.02
TMEM254-201ENST00000372273 CFAP43Q8NDM7 1665 aa14.92□□□□□ -0.02
TMEM254-201ENST00000372273 TIAM1Q13009 1591 aa14.91□□□□□ -0.02
TMEM254-201ENST00000372273 PLCH2O75038 1416 aa14.91□□□□□ -0.02
TMEM254-201ENST00000372273 FANCAO15360 1455 aa14.91□□□□□ -0.02
TMEM254-201ENST00000372273 TEX14Q8IWB6 1497 aa14.91□□□□□ -0.02
TMEM254-201ENST00000372273 ZNF644Q9H582 1327 aaPredicted RBP14.9□□□□□ -0.02
TMEM254-201ENST00000372273 LRRC9Q6ZRR7 1453 aa14.9□□□□□ -0.02
TMEM254-201ENST00000372273 KDM6BO15054 1643 aa14.88□□□□□ -0.03
TMEM254-201ENST00000372273 EFCAB2Q5VUJ9 269 aa14.88□□□□□ -0.03
TMEM254-201ENST00000372273 AKNAQ7Z591 1439 aa14.88□□□□□ -0.03
TMEM254-201ENST00000372273 CCNB3Q8WWL7 1395 aa14.88□□□□□ -0.03
TMEM254-201ENST00000372273 CFDP1Q9UEE9 299 aaPredicted RBP14.88□□□□□ -0.03
TMEM254-201ENST00000372273 GPATCH8Q9UKJ3 1502 aaKnown RBP14.87□□□□□ -0.03
TMEM254-201ENST00000372273 AFAP1Q8N556 730 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms