RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 CTTNBP2Q8WZ74 1663 aa25.71■■□□□ 1.71
TMEM53-204ENST00000372243 CEP170Q5SW79 1584 aa25.7■■□□□ 1.71
TMEM53-204ENST00000372243 KIAA0586Q9BVV6 1533 aa25.66■■□□□ 1.7
TMEM53-204ENST00000372243 IQGAP2Q13576 1575 aa25.6■■□□□ 1.69
TMEM53-204ENST00000372243 OSCARQ8IYS5 282 aa25.58■■□□□ 1.69
TMEM53-204ENST00000372243 CLASP1Q7Z460 1538 aa25.57■■□□□ 1.68
TMEM53-204ENST00000372243 UGGT2Q9NYU1 1516 aa25.5■■□□□ 1.67
TMEM53-204ENST00000372243 CEP162Q5TB80 1403 aa25.48■■□□□ 1.67
TMEM53-204ENST00000372243 SHROOM2Q13796 1616 aa25.48■■□□□ 1.67
TMEM53-204ENST00000372243 JPH4Q96JJ6 628 aa25.46■■□□□ 1.67
TMEM53-204ENST00000372243 CLIP1P30622 1438 aa25.44■■□□□ 1.66
TMEM53-204ENST00000372243 EFCAB5A4FU69 1503 aa25.43■■□□□ 1.66
TMEM53-204ENST00000372243 SAMD9Q5K651 1589 aa25.42■■□□□ 1.66
TMEM53-204ENST00000372243 ARHGAP35Q9NRY4 1499 aa25.39■■□□□ 1.65
TMEM53-204ENST00000372243 RANGAP1P46060 587 aaPredicted RBP25.38■■□□□ 1.65
TMEM53-204ENST00000372243 DISP1Q96F81 1524 aa25.37■■□□□ 1.65
TMEM53-204ENST00000372243 CARMIL2Q6F5E8 1435 aa25.35■■□□□ 1.65
TMEM53-204ENST00000372243 KIAA0556O60303 1618 aa25.35■■□□□ 1.65
TMEM53-204ENST00000372243 PRG4Q92954 1404 aaPredicted RBP25.34■■□□□ 1.65
TMEM53-204ENST00000372243 ARAP1Q96P48 1450 aa25.27■■□□□ 1.64
TMEM53-204ENST00000372243 FHOD3Q2V2M9 1422 aa25.24■■□□□ 1.63
TMEM53-204ENST00000372243 P3H3Q8IVL6 736 aa25.24■■□□□ 1.63
TMEM53-204ENST00000372243 ERCC6L2Q5T890 1561 aa25.24■■□□□ 1.63
TMEM53-204ENST00000372243 FMN1Q68DA7 1419 aa25.18■■□□□ 1.62
TMEM53-204ENST00000372243 ARHGEF11O15085 1522 aa25.16■■□□□ 1.62
TMEM53-204ENST00000372243 VPS8Q8N3P4 1428 aa25.16■■□□□ 1.62
TMEM53-204ENST00000372243 PTPRGP23470 1445 aa25.13■■□□□ 1.61
TMEM53-204ENST00000372243 RIMBP3CA6NJZ7 1639 aa25.09■■□□□ 1.61
TMEM53-204ENST00000372243 RIMBP3BA6NNM3 1639 aa25.09■■□□□ 1.61
TMEM53-204ENST00000372243 RIMBP3Q9UFD9 1639 aa25.09■■□□□ 1.61
TMEM53-204ENST00000372243 CASKIN1Q8WXD9 1431 aa25.05■■□□□ 1.6
TMEM53-204ENST00000372243 ABCA8O94911 1581 aa25.03■■□□□ 1.6
TMEM53-204ENST00000372243 PCF11O94913 1555 aaKnown RBP25.03■■□□□ 1.6
TMEM53-204ENST00000372243 FYCO1Q9BQS8 1478 aa25.03■■□□□ 1.6
TMEM53-204ENST00000372243 TTBK1Q5TCY1 1321 aaPredicted RBP25.03■■□□□ 1.6
TMEM53-204ENST00000372243 RAPGEF6Q8TEU7 1601 aa25.03■■□□□ 1.6
TMEM53-204ENST00000372243 PLB1Q6P1J6 1458 aa25.01■■□□□ 1.59
TMEM53-204ENST00000372243 UACAQ9BZF9 1416 aa25■■□□□ 1.59
TMEM53-204ENST00000372243 HECW1Q76N89 1606 aa24.99■■□□□ 1.59
TMEM53-204ENST00000372243 UHRF1BP1LA0JNW5 1464 aa24.97■■□□□ 1.59
TMEM53-204ENST00000372243 ABCC2Q92887 1545 aa24.95■■□□□ 1.59
TMEM53-204ENST00000372243 DNAJC5Q9H3Z4 198 aa24.94■■□□□ 1.58
TMEM53-204ENST00000372243 NUP153P49790 1475 aaKnown RBP24.93■■□□□ 1.58
TMEM53-204ENST00000372243 CCDC18Q5T9S5 1454 aa24.9■■□□□ 1.58
TMEM53-204ENST00000372243 MAP3K1Q13233 1512 aa24.89■■□□□ 1.58
TMEM53-204ENST00000372243 EPRSP07814 1512 aaKnown RBP24.89■■□□□ 1.57
TMEM53-204ENST00000372243 ADCY10Q96PN6 1610 aa24.89■■□□□ 1.57
TMEM53-204ENST00000372243 LRRIQ1Q96JM4 1722 aa24.89■■□□□ 1.57
TMEM53-204ENST00000372243 ATP1B4Q9UN42 357 aaPredicted RBP24.88■■□□□ 1.57
TMEM53-204ENST00000372243 CYB5RLQ6IPT4 315 aa24.85■■□□□ 1.57
TMEM53-204ENST00000372243 KDM5BQ9UGL1 1544 aa24.84■■□□□ 1.57
TMEM53-204ENST00000372243 APLP2Q06481 763 aa24.84■■□□□ 1.57
TMEM53-204ENST00000372243 CFAP43Q8NDM7 1665 aa24.83■■□□□ 1.57
TMEM53-204ENST00000372243 TIAM1Q13009 1591 aa24.83■■□□□ 1.57
TMEM53-204ENST00000372243 ATP10BO94823 1461 aa24.82■■□□□ 1.56
TMEM53-204ENST00000372243 CDK13Q14004 1512 aaKnown RBP24.8■■□□□ 1.56
TMEM53-204ENST00000372243 ZCCHC11Q5TAX3 1644 aaKnown RBP24.77■■□□□ 1.56
TMEM53-204ENST00000372243 ARID3CA6NKF2 412 aa24.74■■□□□ 1.55
TMEM53-204ENST00000372243 CDK11AQ9UQ88 783 aaPredicted RBP24.74■■□□□ 1.55
TMEM53-204ENST00000372243 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.72■■□□□ 1.55
TMEM53-204ENST00000372243 HNRNPUL2Q1KMD3 747 aaKnown RBP24.72■■□□□ 1.55
TMEM53-204ENST00000372243 LRRC9Q6ZRR7 1453 aa24.72■■□□□ 1.55
TMEM53-204ENST00000372243 NPM1P06748 294 aaKnown RBP eCLIP24.71■■□□□ 1.55
TMEM53-204ENST00000372243 MAGI3Q5TCQ9 1506 aa24.68■■□□□ 1.54
TMEM53-204ENST00000372243 EHBP1L1Q8N3D4 1523 aa24.68■■□□□ 1.54
TMEM53-204ENST00000372243 KANK4Q5T7N3 995 aaPredicted RBP24.67■■□□□ 1.54
TMEM53-204ENST00000372243 MTUS2Q5JR59 1369 aa24.67■■□□□ 1.54
TMEM53-204ENST00000372243 PLEKHD1A6NEE1 506 aa24.67■■□□□ 1.54
TMEM53-204ENST00000372243 TROQ12816 1431 aaPredicted RBP24.65■■□□□ 1.54
TMEM53-204ENST00000372243 MAPKBP1O60336 1514 aa24.63■■□□□ 1.53
TMEM53-204ENST00000372243 ASXL2Q76L83 1435 aa24.6■■□□□ 1.53
TMEM53-204ENST00000372243 WDR7Q9Y4E6 1490 aa24.6■■□□□ 1.53
TMEM53-204ENST00000372243 SUPT6HQ7KZ85 1726 aaKnown RBP24.57■■□□□ 1.52
TMEM53-204ENST00000372243 KIF14Q15058 1648 aa24.55■■□□□ 1.52
TMEM53-204ENST00000372243 PPARGC1BQ86YN6 1023 aaKnown RBP24.54■■□□□ 1.52
TMEM53-204ENST00000372243 NCOA2Q15596 1464 aa24.51■■□□□ 1.51
TMEM53-204ENST00000372243 ABCC10Q5T3U5 1492 aa24.46■■□□□ 1.51
TMEM53-204ENST00000372243 KCNH8Q96L42 1107 aa24.46■■□□□ 1.51
TMEM53-204ENST00000372243 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.45■■□□□ 1.51
TMEM53-204ENST00000372243 ABCA9Q8IUA7 1624 aa24.43■■□□□ 1.5
TMEM53-204ENST00000372243 PHLDB1Q86UU1 1377 aa24.42■■□□□ 1.5
TMEM53-204ENST00000372243 GLI2P10070 1586 aa24.41■■□□□ 1.5
TMEM53-204ENST00000372243 TTC37Q6PGP7 1564 aa24.41■■□□□ 1.5
TMEM53-204ENST00000372243 CCNB3Q8WWL7 1395 aa24.4■■□□□ 1.5
TMEM53-204ENST00000372243 MYOM3Q5VTT5 1437 aa24.39■■□□□ 1.5
TMEM53-204ENST00000372243 DIP2BQ9P265 1576 aa24.39■■□□□ 1.5
TMEM53-204ENST00000372243 ITSN2Q9NZM3 1697 aa24.38■■□□□ 1.49
TMEM53-204ENST00000372243 GPATCH8Q9UKJ3 1502 aaKnown RBP24.37■■□□□ 1.49
TMEM53-204ENST00000372243 CDC42BPAQ5VT25 1732 aa24.36■■□□□ 1.49
TMEM53-204ENST00000372243 MYO5CQ9NQX4 1742 aa24.36■■□□□ 1.49
TMEM53-204ENST00000372243 MIA2Q96PC5 1412 aa24.34■■□□□ 1.49
TMEM53-204ENST00000372243 PREX2Q70Z35 1606 aa24.34■■□□□ 1.49
TMEM53-204ENST00000372243 ARAP3Q8WWN8 1544 aa24.33■■□□□ 1.49
TMEM53-204ENST00000372243 PLCH2O75038 1416 aa24.33■■□□□ 1.49
TMEM53-204ENST00000372243 FGD6Q6ZV73 1430 aa24.32■■□□□ 1.48
TMEM53-204ENST00000372243 RRBP1Q9P2E9 1410 aaKnown RBP24.32■■□□□ 1.48
TMEM53-204ENST00000372243 MAP3K4Q9Y6R4 1608 aa24.31■■□□□ 1.48
TMEM53-204ENST00000372243 CDC42BPBQ9Y5S2 1711 aa24.31■■□□□ 1.48
TMEM53-204ENST00000372243 KIF13AQ9H1H9 1805 aa24.3■■□□□ 1.48
TMEM53-204ENST00000372243 FAM69CQ0P6D2 419 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms