RNA–Protein interactions for RNA: ENST00000372192.3

PTCH2-201, Transcript of patched 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTCH2, Length 4,225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-201ENST00000372192 FAM9BQ8IZU0 186 aa15.68■□□□□ 0.1
PTCH2-201ENST00000372192 KCNH8Q96L42 1107 aa15.67■□□□□ 0.1
PTCH2-201ENST00000372192 RBM19Q9Y4C8 960 aaKnown RBP15.67■□□□□ 0.1
PTCH2-201ENST00000372192 SYNJ1O43426 1573 aa15.66■□□□□ 0.1
PTCH2-201ENST00000372192 MYT1LQ9UL68 1186 aa15.65■□□□□ 0.1
PTCH2-201ENST00000372192 CARMIL1Q5VZK9 1371 aa15.65■□□□□ 0.1
PTCH2-201ENST00000372192 EIF4G1Q04637 1599 aaKnown RBP15.64■□□□□ 0.09
PTCH2-201ENST00000372192 EIF4G2P78344 907 aaKnown RBP eCLIP15.64■□□□□ 0.09
PTCH2-201ENST00000372192 CUX2O14529 1486 aa15.64■□□□□ 0.09
PTCH2-201ENST00000372192 MRS2Q9HD23 443 aa15.63■□□□□ 0.09
PTCH2-201ENST00000372192 ZNF326Q5BKZ1 582 aaKnown RBP15.63■□□□□ 0.09
PTCH2-201ENST00000372192 CHIC2Q9UKJ5 165 aa15.63■□□□□ 0.09
PTCH2-201ENST00000372192 PPP1R15AO75807 674 aaPredicted RBP15.62■□□□□ 0.09
PTCH2-201ENST00000372192 ANP32AP39687 249 aaKnown RBP15.61■□□□□ 0.09
PTCH2-201ENST00000372192 DAXXQ9UER7 740 aaPredicted RBP15.6■□□□□ 0.09
PTCH2-201ENST00000372192 RRBP1Q9P2E9 1410 aaKnown RBP15.58■□□□□ 0.09
PTCH2-201ENST00000372192 RRP7BPQ9NSQ0 103 aa15.57■□□□□ 0.08
PTCH2-201ENST00000372192 ARID3CA6NKF2 412 aa15.56■□□□□ 0.08
PTCH2-201ENST00000372192 ARHGAP35Q9NRY4 1499 aa15.56■□□□□ 0.08
PTCH2-201ENST00000372192 ERICH3Q5RHP9 1530 aa15.55■□□□□ 0.08
PTCH2-201ENST00000372192 BCL11AQ9H165 835 aa15.54■□□□□ 0.08
PTCH2-201ENST00000372192 PPP4R2Q9NY27 417 aa15.54■□□□□ 0.08
PTCH2-201ENST00000372192 ARAP1Q96P48 1450 aa15.54■□□□□ 0.08
PTCH2-201ENST00000372192 CCDC136Q96JN2 1154 aa15.52■□□□□ 0.08
PTCH2-201ENST00000372192 PRXQ9BXM0 1461 aa15.52■□□□□ 0.07
PTCH2-201ENST00000372192 ERICH6BQ5W0A0 696 aa15.48■□□□□ 0.07
PTCH2-201ENST00000372192 TOP2BQ02880 1626 aa15.46■□□□□ 0.07
PTCH2-201ENST00000372192 NBR1Q14596 966 aa15.46■□□□□ 0.07
PTCH2-201ENST00000372192 TMC1Q8TDI8 760 aa15.45■□□□□ 0.06
PTCH2-201ENST00000372192 HSPA5P11021 654 aaKnown RBP15.44■□□□□ 0.06
PTCH2-201ENST00000372192 ZBTB47Q9UFB7 747 aaPredicted RBP15.44■□□□□ 0.06
PTCH2-201ENST00000372192 SLC4A1APQ9BWU0 796 aaKnown RBP15.43■□□□□ 0.06
PTCH2-201ENST00000372192 B4GALNT3Q6L9W6 998 aa15.42■□□□□ 0.06
PTCH2-201ENST00000372192 NPM2Q86SE8 214 aaKnown RBP15.42■□□□□ 0.06
PTCH2-201ENST00000372192 IGF1RP08069 1367 aa15.42■□□□□ 0.06
PTCH2-201ENST00000372192 PHLDB1Q86UU1 1377 aa15.42■□□□□ 0.06
PTCH2-201ENST00000372192 FMN1Q68DA7 1419 aa15.41■□□□□ 0.06
PTCH2-201ENST00000372192 ZNF777Q9ULD5 760 aaPredicted RBP15.41■□□□□ 0.06
PTCH2-201ENST00000372192 FHOD3Q2V2M9 1422 aa15.4■□□□□ 0.06
PTCH2-201ENST00000372192 LRRC9Q6ZRR7 1453 aa15.4■□□□□ 0.06
PTCH2-201ENST00000372192 NOP58Q9Y2X3 529 aaKnown RBP15.35■□□□□ 0.05
PTCH2-201ENST00000372192 PEG3Q9GZU2 1588 aa15.35■□□□□ 0.05
PTCH2-201ENST00000372192 CADPSQ9ULU8 1353 aa15.35■□□□□ 0.05
PTCH2-201ENST00000372192 CCDC18Q5T9S5 1454 aa15.33■□□□□ 0.04
PTCH2-201ENST00000372192 SALL2Q9Y467 1007 aaPredicted RBP15.32■□□□□ 0.04
PTCH2-201ENST00000372192 FANCIQ9NVI1 1328 aa15.32■□□□□ 0.04
PTCH2-201ENST00000372192 WDR97A6NE52 1622 aa15.31■□□□□ 0.04
PTCH2-201ENST00000372192 NCAPD3P42695 1498 aa15.31■□□□□ 0.04
PTCH2-201ENST00000372192 CUX1P39880 1505 aa15.3■□□□□ 0.04
PTCH2-201ENST00000372192 TIAM1Q13009 1591 aa15.3■□□□□ 0.04
PTCH2-201ENST00000372192 MPHOSPH9Q99550 1183 aa15.3■□□□□ 0.04
PTCH2-201ENST00000372192 L3MBTL2Q969R5 705 aa15.28■□□□□ 0.04
PTCH2-201ENST00000372192 BICRAQ9NZM4 1560 aa15.28■□□□□ 0.04
PTCH2-201ENST00000372192 UACAQ9BZF9 1416 aa15.28■□□□□ 0.04
PTCH2-201ENST00000372192 FGD6Q6ZV73 1430 aa15.27■□□□□ 0.04
PTCH2-201ENST00000372192 DEKP35659 375 aaKnown RBP15.27■□□□□ 0.03
PTCH2-201ENST00000372192 SENP3-EIF4A1A0A087X0R7 540 aa15.26■□□□□ 0.03
PTCH2-201ENST00000372192 KDM2AQ9Y2K7 1162 aa15.26■□□□□ 0.03
PTCH2-201ENST00000372192 FOXD1Q16676 465 aa15.26■□□□□ 0.03
PTCH2-201ENST00000372192 CFTRP13569 1480 aa15.26■□□□□ 0.03
PTCH2-201ENST00000372192 FGD5Q6ZNL6 1462 aa15.26■□□□□ 0.03
PTCH2-201ENST00000372192 PRKRIP1Q9H875 184 aaPredicted RBP15.25■□□□□ 0.03
PTCH2-201ENST00000372192 FBLN2P98095 1184 aa15.25■□□□□ 0.03
PTCH2-201ENST00000372192 ZBED9Q6R2W3 1325 aa15.22■□□□□ 0.03
PTCH2-201ENST00000372192 MAP3K1Q13233 1512 aa15.22■□□□□ 0.03
PTCH2-201ENST00000372192 UNC13AQ9UPW8 1703 aa15.22■□□□□ 0.03
PTCH2-201ENST00000372192 TSPY4P0CV99 314 aa15.22■□□□□ 0.03
PTCH2-201ENST00000372192 TSPY10P0CW01 314 aa15.22■□□□□ 0.03
PTCH2-201ENST00000372192 CASKIN1Q8WXD9 1431 aa15.22■□□□□ 0.03
PTCH2-201ENST00000372192 CARD11Q9BXL7 1154 aa15.21■□□□□ 0.03
PTCH2-201ENST00000372192 CFDP1Q9UEE9 299 aaPredicted RBP15.21■□□□□ 0.03
PTCH2-201ENST00000372192 BIVM-ERCC5R4GMW8 1640 aa15.2■□□□□ 0.02
PTCH2-201ENST00000372192 FYCO1Q9BQS8 1478 aa15.19■□□□□ 0.02
PTCH2-201ENST00000372192 TDRD9Q8NDG6 1382 aaKnown RBP15.19■□□□□ 0.02
PTCH2-201ENST00000372192 NUDCQ9Y266 331 aa15.19■□□□□ 0.02
PTCH2-201ENST00000372192 WASHC2AQ641Q2 1341 aa15.19■□□□□ 0.02
PTCH2-201ENST00000372192 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.19■□□□□ 0.02
PTCH2-201ENST00000372192 MAPKBP1O60336 1514 aa15.18■□□□□ 0.02
PTCH2-201ENST00000372192 MYOM3Q5VTT5 1437 aa15.17■□□□□ 0.02
PTCH2-201ENST00000372192 HMGXB3Q12766 1538 aa15.17■□□□□ 0.02
PTCH2-201ENST00000372192 FANCD2Q9BXW9 1451 aa15.15■□□□□ 0.02
PTCH2-201ENST00000372192 HFM1A2PYH4 1435 aa15.15■□□□□ 0.02
PTCH2-201ENST00000372192 CNTLNQ9NXG0 1405 aa15.15■□□□□ 0.02
PTCH2-201ENST00000372192 DDRGK1Q96HY6 314 aa15.15■□□□□ 0.02
PTCH2-201ENST00000372192 PPM1GO15355 546 aaPredicted RBP15.13■□□□□ 0.01
PTCH2-201ENST00000372192 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.13■□□□□ 0.01
PTCH2-201ENST00000372192 IPO9Q96P70 1041 aaKnown RBP15.13■□□□□ 0.01
PTCH2-201ENST00000372192 CCDC7Q96M83 1385 aa15.13■□□□□ 0.01
PTCH2-201ENST00000372192 CANXP27824 592 aaKnown RBP15.13■□□□□ 0.01
PTCH2-201ENST00000372192 NCOA2Q15596 1464 aa15.11■□□□□ 0.01
PTCH2-201ENST00000372192 EFCAB5A4FU69 1503 aa15.11■□□□□ 0.01
PTCH2-201ENST00000372192 NEFMP07197 916 aa15.1■□□□□ 0.01
PTCH2-201ENST00000372192 RAD54L2Q9Y4B4 1467 aa15.1■□□□□ 0.01
PTCH2-201ENST00000372192 WDR43Q15061 677 aaKnown RBP eCLIP15.1■□□□□ 0.01
PTCH2-201ENST00000372192 LAS1LQ9Y4W2 734 aaKnown RBP15.1■□□□□ 0.01
PTCH2-201ENST00000372192 PKD2Q13563 968 aa15.09■□□□□ 0.01
PTCH2-201ENST00000372192 PLEKHD1A6NEE1 506 aa15.08■□□□□ 0.01
PTCH2-201ENST00000372192 TCERG1O14776 1098 aaKnown RBP15.07■□□□□ 0
PTCH2-201ENST00000372192 MSH5O43196 834 aa15.07■□□□□ 0
PTCH2-201ENST00000372192 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms