RNA–Protein interactions for RNA: ENST00000371953.7

PTEN-201, Transcript of phosphatase and tensin homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTEN, Length 9,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTEN-201ENST00000371953 RSPH6AQ9H0K4 717 aa21.75■■□□□ 1.07
PTEN-201ENST00000371953 MSNP26038 577 aaKnown RBP21.73■■□□□ 1.07
PTEN-201ENST00000371953 TMC1Q8TDI8 760 aa21.69■■□□□ 1.06
PTEN-201ENST00000371953 CSRNP3Q8WYN3 585 aa21.66■■□□□ 1.06
PTEN-201ENST00000371953 PPP4R2Q9NY27 417 aa21.65■■□□□ 1.06
PTEN-201ENST00000371953 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.65■■□□□ 1.06
PTEN-201ENST00000371953 CHGAP10645 457 aaKnown RBP21.64■■□□□ 1.05
PTEN-201ENST00000371953 NPM1P06748 294 aaKnown RBP eCLIP21.64■■□□□ 1.05
PTEN-201ENST00000371953 RBM19Q9Y4C8 960 aaKnown RBP21.62■■□□□ 1.05
PTEN-201ENST00000371953 PNNQ9H307 717 aaKnown RBP21.62■■□□□ 1.05
PTEN-201ENST00000371953 LAS1LQ9Y4W2 734 aaKnown RBP21.62■■□□□ 1.05
PTEN-201ENST00000371953 HSP90AA2PQ14568 343 aaPredicted RBP21.62■■□□□ 1.05
PTEN-201ENST00000371953 MRS2Q9HD23 443 aa21.61■■□□□ 1.05
PTEN-201ENST00000371953 IRX6P78412 446 aaPredicted RBP21.6■■□□□ 1.05
PTEN-201ENST00000371953 GOLGA6L6A8MZA4 724 aa21.6■■□□□ 1.05
PTEN-201ENST00000371953 MYH16Q9H6N6 1097 aa21.59■■□□□ 1.05
PTEN-201ENST00000371953 PLPPR3Q6T4P5 718 aa21.58■■□□□ 1.04
PTEN-201ENST00000371953 TNNT3P45378 269 aaPredicted RBP21.56■■□□□ 1.04
PTEN-201ENST00000371953 NRDCO43847 1150 aa21.55■■□□□ 1.04
PTEN-201ENST00000371953 ZRSR1Q15695 479 aaKnown RBP21.53■■□□□ 1.04
PTEN-201ENST00000371953 PTMSP20962 102 aa21.52■■□□□ 1.04
PTEN-201ENST00000371953 WDR43Q15061 677 aaKnown RBP eCLIP21.49■■□□□ 1.03
PTEN-201ENST00000371953 USP35Q9P2H5 1018 aa21.49■■□□□ 1.03
PTEN-201ENST00000371953 AMER1Q5JTC6 1135 aaPredicted RBP21.47■■□□□ 1.03
PTEN-201ENST00000371953 CASC1Q6TDU7 716 aa21.46■■□□□ 1.03
PTEN-201ENST00000371953 RB1CC1Q8TDY2 1594 aa21.44■■□□□ 1.02
PTEN-201ENST00000371953 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.43■■□□□ 1.02
PTEN-201ENST00000371953 ARID4BQ4LE39 1312 aaPredicted RBP21.38■■□□□ 1.01
PTEN-201ENST00000371953 VSIG10Q8N0Z9 540 aa21.37■■□□□ 1.01
PTEN-201ENST00000371953 SALL2Q9Y467 1007 aaPredicted RBP21.36■■□□□ 1.01
PTEN-201ENST00000371953 KIAA2012Q0VF49 1180 aa21.34■■□□□ 1.01
PTEN-201ENST00000371953 MTUS2Q5JR59 1369 aa21.33■■□□□ 1
PTEN-201ENST00000371953 TSPY4P0CV99 314 aa21.32■■□□□ 1
PTEN-201ENST00000371953 TSPY10P0CW01 314 aa21.32■■□□□ 1
PTEN-201ENST00000371953 ZCCHC6Q5VYS8 1495 aaKnown RBP21.3■■□□□ 1
PTEN-201ENST00000371953 HSP90AB1P08238 724 aaKnown RBP21.29■■□□□ 1
PTEN-201ENST00000371953 HSCBQ8IWL3 235 aa21.29■■□□□ 1
PTEN-201ENST00000371953 PKNOX2Q96KN3 472 aa21.27■■□□□ 1
PTEN-201ENST00000371953 A0A0G2JS52 829 aa21.27■■□□□ 1
PTEN-201ENST00000371953 TSHZ2Q9NRE2 1034 aa21.27■■□□□ 1
PTEN-201ENST00000371953 IPO9Q96P70 1041 aaKnown RBP21.26■□□□□ 0.99
PTEN-201ENST00000371953 KDM2AQ9Y2K7 1162 aa21.26■□□□□ 0.99
PTEN-201ENST00000371953 CHIC2Q9UKJ5 165 aa21.25■□□□□ 0.99
PTEN-201ENST00000371953 EIF4G2P78344 907 aaKnown RBP eCLIP21.25■□□□□ 0.99
PTEN-201ENST00000371953 GBP4Q96PP9 640 aa21.24■□□□□ 0.99
PTEN-201ENST00000371953 GOLGA6L3A6NEY3 463 aa21.22■□□□□ 0.99
PTEN-201ENST00000371953 CHMP7Q8WUX9 453 aaPredicted RBP21.22■□□□□ 0.99
PTEN-201ENST00000371953 PRKCSHP14314 528 aaPredicted RBP21.22■□□□□ 0.99
PTEN-201ENST00000371953 RSF1Q96T23 1441 aaPredicted RBP21.19■□□□□ 0.98
PTEN-201ENST00000371953 PLCB2Q00722 1185 aa21.19■□□□□ 0.98
PTEN-201ENST00000371953 B4GALNT3Q6L9W6 998 aa21.18■□□□□ 0.98
PTEN-201ENST00000371953 CFAP44Q96MT7 982 aa21.18■□□□□ 0.98
PTEN-201ENST00000371953 C14orf37Q86TY3 774 aa21.17■□□□□ 0.98
PTEN-201ENST00000371953 SETQ01105 290 aaPredicted RBP21.17■□□□□ 0.98
PTEN-201ENST00000371953 PPP1R15AO75807 674 aaPredicted RBP21.16■□□□□ 0.98
PTEN-201ENST00000371953 CHMP4BQ9H444 224 aaKnown RBP21.15■□□□□ 0.98
PTEN-201ENST00000371953 FTSJ3Q8IY81 847 aaKnown RBP21.15■□□□□ 0.98
PTEN-201ENST00000371953 SYAP1Q96A49 352 aaPredicted RBP21.15■□□□□ 0.98
PTEN-201ENST00000371953 GOLGA6L1Q8N7Z2 621 aa21.13■□□□□ 0.97
PTEN-201ENST00000371953 PODXL2Q9NZ53 605 aa21.13■□□□□ 0.97
PTEN-201ENST00000371953 CALRP27797 417 aaKnown RBP21.13■□□□□ 0.97
PTEN-201ENST00000371953 CCER2I3L3R5 266 aa21.13■□□□□ 0.97
PTEN-201ENST00000371953 DRC7Q8IY82 874 aa21.13■□□□□ 0.97
PTEN-201ENST00000371953 MYO15BQ96JP2 1530 aa21.13■□□□□ 0.97
PTEN-201ENST00000371953 ZBTB7CA1YPR0 619 aa21.12■□□□□ 0.97
PTEN-201ENST00000371953 TCERG1O14776 1098 aaKnown RBP21.12■□□□□ 0.97
PTEN-201ENST00000371953 MTERF4Q7Z6M4 381 aaKnown RBP21.1■□□□□ 0.97
PTEN-201ENST00000371953 FANCIQ9NVI1 1328 aa21.1■□□□□ 0.97
PTEN-201ENST00000371953 GSE1Q14687 1217 aa21.09■□□□□ 0.97
PTEN-201ENST00000371953 CLIP1P30622 1438 aa21.09■□□□□ 0.97
PTEN-201ENST00000371953 RGS3P49796 1198 aa21.08■□□□□ 0.97
PTEN-201ENST00000371953 MS4A1P11836 297 aa21.08■□□□□ 0.97
PTEN-201ENST00000371953 ARID3AQ99856 593 aa21.08■□□□□ 0.96
PTEN-201ENST00000371953 A0A0U1RQG5 324 aaPredicted RBP21.06■□□□□ 0.96
PTEN-201ENST00000371953 NACADO15069 1562 aa21.06■□□□□ 0.96
PTEN-201ENST00000371953 HAP1P54257 671 aaPredicted RBP21.05■□□□□ 0.96
PTEN-201ENST00000371953 GOLGA3Q08378 1498 aa21.05■□□□□ 0.96
PTEN-201ENST00000371953 MAP7D2Q96T17 732 aa21.04■□□□□ 0.96
PTEN-201ENST00000371953 CDCA8Q53HL2 280 aa21.04■□□□□ 0.96
PTEN-201ENST00000371953 GOLGA6L4A6NEF3 574 aa21.03■□□□□ 0.96
PTEN-201ENST00000371953 CFAP53Q96M91 514 aa21.03■□□□□ 0.96
PTEN-201ENST00000371953 PHF14O94880 888 aa21.03■□□□□ 0.96
PTEN-201ENST00000371953 PLEKHG5O94827 1062 aa20.99■□□□□ 0.95
PTEN-201ENST00000371953 DDX11L8A8MPP1 907 aa20.98■□□□□ 0.95
PTEN-201ENST00000371953 APPP05067 770 aa20.97■□□□□ 0.95
PTEN-201ENST00000371953 BAZ1BQ9UIG0 1483 aaKnown RBP20.97■□□□□ 0.95
PTEN-201ENST00000371953 EEA1Q15075 1411 aa20.97■□□□□ 0.95
PTEN-201ENST00000371953 GZF1Q9H116 711 aaPredicted RBP20.97■□□□□ 0.95
PTEN-201ENST00000371953 KNSTRNQ9Y448 316 aa20.97■□□□□ 0.95
PTEN-201ENST00000371953 HTATSF1O43719 755 aaKnown RBP20.96■□□□□ 0.95
PTEN-201ENST00000371953 ZNF771Q7L3S4 317 aaPredicted RBP20.95■□□□□ 0.94
PTEN-201ENST00000371953 ERCC6Q03468 1493 aa20.95■□□□□ 0.94
PTEN-201ENST00000371953 RRP7BPQ9NSQ0 103 aa20.94■□□□□ 0.94
PTEN-201ENST00000371953 MCCP23508 829 aa20.94■□□□□ 0.94
PTEN-201ENST00000371953 KCNH8Q96L42 1107 aa20.93■□□□□ 0.94
PTEN-201ENST00000371953 PLEKHD1A6NEE1 506 aa20.93■□□□□ 0.94
PTEN-201ENST00000371953 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.93■□□□□ 0.94
PTEN-201ENST00000371953 SENP3Q9H4L4 574 aaPredicted RBP20.91■□□□□ 0.94
PTEN-201ENST00000371953 NOM1Q5C9Z4 860 aaKnown RBP20.91■□□□□ 0.94
PTEN-201ENST00000371953 CSPP1Q1MSJ5 1256 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms