RNA–Protein interactions for RNA: ENST00000371781.3

LCN1-202, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-202ENST00000371781 CEP162Q5TB80 1403 aa17.67■□□□□ 0.42
LCN1-202ENST00000371781 CTTNBP2Q8WZ74 1663 aa17.67■□□□□ 0.42
LCN1-202ENST00000371781 SYNJ2O15056 1496 aa17.63■□□□□ 0.41
LCN1-202ENST00000371781 GRIN2AQ12879 1464 aa17.63■□□□□ 0.41
LCN1-202ENST00000371781 UBTFP17480 764 aaKnown RBP17.63■□□□□ 0.41
LCN1-202ENST00000371781 CYB5RLQ6IPT4 315 aa17.6■□□□□ 0.41
LCN1-202ENST00000371781 ARAP1Q96P48 1450 aa17.6■□□□□ 0.41
LCN1-202ENST00000371781 CEP170Q5SW79 1584 aa17.6■□□□□ 0.41
LCN1-202ENST00000371781 CLIP1P30622 1438 aa17.55■□□□□ 0.4
LCN1-202ENST00000371781 NUP160Q12769 1436 aa17.55■□□□□ 0.4
LCN1-202ENST00000371781 FBLN2P98095 1184 aa17.54■□□□□ 0.4
LCN1-202ENST00000371781 ARHGAP35Q9NRY4 1499 aa17.54■□□□□ 0.4
LCN1-202ENST00000371781 IQGAP2Q13576 1575 aa17.51■□□□□ 0.39
LCN1-202ENST00000371781 SAMD9Q5K651 1589 aa17.51■□□□□ 0.39
LCN1-202ENST00000371781 CLASP1Q7Z460 1538 aa17.49■□□□□ 0.39
LCN1-202ENST00000371781 TRHP20396 242 aaPredicted RBP17.47■□□□□ 0.39
LCN1-202ENST00000371781 KIAA0586Q9BVV6 1533 aa17.47■□□□□ 0.39
LCN1-202ENST00000371781 EFCAB5A4FU69 1503 aa17.45■□□□□ 0.38
LCN1-202ENST00000371781 UGGT2Q9NYU1 1516 aa17.45■□□□□ 0.38
LCN1-202ENST00000371781 RANGAP1P46060 587 aaPredicted RBP17.44■□□□□ 0.38
LCN1-202ENST00000371781 CHMP7Q8WUX9 453 aaPredicted RBP17.44■□□□□ 0.38
LCN1-202ENST00000371781 FHOD3Q2V2M9 1422 aa17.39■□□□□ 0.38
LCN1-202ENST00000371781 VPS8Q8N3P4 1428 aa17.39■□□□□ 0.38
LCN1-202ENST00000371781 DISP1Q96F81 1524 aa17.39■□□□□ 0.37
LCN1-202ENST00000371781 KIAA0556O60303 1618 aa17.39■□□□□ 0.37
LCN1-202ENST00000371781 SHROOM2Q13796 1616 aa17.38■□□□□ 0.37
LCN1-202ENST00000371781 PCF11O94913 1555 aaKnown RBP17.34■□□□□ 0.37
LCN1-202ENST00000371781 ERCC6L2Q5T890 1561 aa17.31■□□□□ 0.36
LCN1-202ENST00000371781 P3H3Q8IVL6 736 aa17.3■□□□□ 0.36
LCN1-202ENST00000371781 LRRIQ1Q96JM4 1722 aa17.27■□□□□ 0.35
LCN1-202ENST00000371781 JPH4Q96JJ6 628 aa17.24■□□□□ 0.35
LCN1-202ENST00000371781 PRG4Q92954 1404 aaPredicted RBP17.22■□□□□ 0.35
LCN1-202ENST00000371781 CFAP43Q8NDM7 1665 aa17.22■□□□□ 0.35
LCN1-202ENST00000371781 CASKIN1Q8WXD9 1431 aa17.21■□□□□ 0.35
LCN1-202ENST00000371781 FYCO1Q9BQS8 1478 aa17.21■□□□□ 0.35
LCN1-202ENST00000371781 FMN1Q68DA7 1419 aa17.21■□□□□ 0.34
LCN1-202ENST00000371781 TIAM1Q13009 1591 aa17.17■□□□□ 0.34
LCN1-202ENST00000371781 CARMIL2Q6F5E8 1435 aa17.16■□□□□ 0.34
LCN1-202ENST00000371781 RAPGEF6Q8TEU7 1601 aa17.16■□□□□ 0.34
LCN1-202ENST00000371781 ABCA8O94911 1581 aa17.15■□□□□ 0.34
LCN1-202ENST00000371781 HECW1Q76N89 1606 aa17.14■□□□□ 0.33
LCN1-202ENST00000371781 PLB1Q6P1J6 1458 aa17.13■□□□□ 0.33
LCN1-202ENST00000371781 MAP3K1Q13233 1512 aa17.13■□□□□ 0.33
LCN1-202ENST00000371781 NUP153P49790 1475 aaKnown RBP17.12■□□□□ 0.33
LCN1-202ENST00000371781 PPARGC1BQ86YN6 1023 aaKnown RBP17.12■□□□□ 0.33
LCN1-202ENST00000371781 AEBP2Q6ZN18 517 aaPredicted RBP17.1■□□□□ 0.33
LCN1-202ENST00000371781 CDK13Q14004 1512 aaKnown RBP17.1■□□□□ 0.33
LCN1-202ENST00000371781 MAGI3Q5TCQ9 1506 aa17.1■□□□□ 0.33
LCN1-202ENST00000371781 KIF13AQ9H1H9 1805 aa17.09■□□□□ 0.33
LCN1-202ENST00000371781 EPRSP07814 1512 aaKnown RBP17.07■□□□□ 0.32
LCN1-202ENST00000371781 KANK4Q5T7N3 995 aaPredicted RBP17.07■□□□□ 0.32
LCN1-202ENST00000371781 LRRC9Q6ZRR7 1453 aa17.05■□□□□ 0.32
LCN1-202ENST00000371781 PTPRGP23470 1445 aa17.04■□□□□ 0.32
LCN1-202ENST00000371781 TTBK1Q5TCY1 1321 aaPredicted RBP17.04■□□□□ 0.32
LCN1-202ENST00000371781 CCDC18Q5T9S5 1454 aa17.03■□□□□ 0.32
LCN1-202ENST00000371781 ABCC2Q92887 1545 aa17.01■□□□□ 0.31
LCN1-202ENST00000371781 EHBP1L1Q8N3D4 1523 aa16.99■□□□□ 0.31
LCN1-202ENST00000371781 ADCY10Q96PN6 1610 aa16.99■□□□□ 0.31
LCN1-202ENST00000371781 UACAQ9BZF9 1416 aa16.98■□□□□ 0.31
LCN1-202ENST00000371781 ATP1B4Q9UN42 357 aaPredicted RBP16.97■□□□□ 0.31
LCN1-202ENST00000371781 UHRF1BP1LA0JNW5 1464 aa16.97■□□□□ 0.31
LCN1-202ENST00000371781 ATP10BO94823 1461 aa16.97■□□□□ 0.31
LCN1-202ENST00000371781 ARID3CA6NKF2 412 aa16.95■□□□□ 0.3
LCN1-202ENST00000371781 ZCCHC11Q5TAX3 1644 aaKnown RBP16.93■□□□□ 0.3
LCN1-202ENST00000371781 APLP2Q06481 763 aa16.92■□□□□ 0.3
LCN1-202ENST00000371781 PHLDB1Q86UU1 1377 aa16.91■□□□□ 0.3
LCN1-202ENST00000371781 KIF14Q15058 1648 aa16.91■□□□□ 0.3
LCN1-202ENST00000371781 KDM5BQ9UGL1 1544 aa16.91■□□□□ 0.3
LCN1-202ENST00000371781 SUPT6HQ7KZ85 1726 aaKnown RBP16.9■□□□□ 0.3
LCN1-202ENST00000371781 NCOA2Q15596 1464 aa16.89■□□□□ 0.29
LCN1-202ENST00000371781 MTUS2Q5JR59 1369 aa16.88■□□□□ 0.29
LCN1-202ENST00000371781 TROQ12816 1431 aaPredicted RBP16.87■□□□□ 0.29
LCN1-202ENST00000371781 DIP2BQ9P265 1576 aa16.86■□□□□ 0.29
LCN1-202ENST00000371781 RRBP1Q9P2E9 1410 aaKnown RBP16.86■□□□□ 0.29
LCN1-202ENST00000371781 TRIM26Q12899 539 aaPredicted RBP16.85■□□□□ 0.29
LCN1-202ENST00000371781 ABCC10Q5T3U5 1492 aa16.85■□□□□ 0.29
LCN1-202ENST00000371781 MAPKBP1O60336 1514 aa16.85■□□□□ 0.29
LCN1-202ENST00000371781 TSPOAP1O95153 1857 aa16.84■□□□□ 0.29
LCN1-202ENST00000371781 FAM69CQ0P6D2 419 aa16.81■□□□□ 0.28
LCN1-202ENST00000371781 PCGF6Q9BYE7 350 aa16.81■□□□□ 0.28
LCN1-202ENST00000371781 TTC37Q6PGP7 1564 aa16.78■□□□□ 0.28
LCN1-202ENST00000371781 MYOM3Q5VTT5 1437 aa16.78■□□□□ 0.28
LCN1-202ENST00000371781 KDM6BO15054 1643 aa16.78■□□□□ 0.28
LCN1-202ENST00000371781 CDC42BPAQ5VT25 1732 aa16.77■□□□□ 0.28
LCN1-202ENST00000371781 FGD6Q6ZV73 1430 aa16.77■□□□□ 0.27
LCN1-202ENST00000371781 NPM1P06748 294 aaKnown RBP eCLIP16.76■□□□□ 0.27
LCN1-202ENST00000371781 CCNB3Q8WWL7 1395 aa16.76■□□□□ 0.27
LCN1-202ENST00000371781 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.75■□□□□ 0.27
LCN1-202ENST00000371781 HNRNPUL2Q1KMD3 747 aaKnown RBP16.75■□□□□ 0.27
LCN1-202ENST00000371781 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.75■□□□□ 0.27
LCN1-202ENST00000371781 PTPN23Q9H3S7 1636 aa16.74■□□□□ 0.27
LCN1-202ENST00000371781 ITSN2Q9NZM3 1697 aa16.73■□□□□ 0.27
LCN1-202ENST00000371781 GPATCH8Q9UKJ3 1502 aaKnown RBP16.73■□□□□ 0.27
LCN1-202ENST00000371781 TCOF1Q13428 1488 aaKnown RBP16.73■□□□□ 0.27
LCN1-202ENST00000371781 WDR7Q9Y4E6 1490 aa16.73■□□□□ 0.27
LCN1-202ENST00000371781 PREX2Q70Z35 1606 aa16.71■□□□□ 0.27
LCN1-202ENST00000371781 ASXL2Q76L83 1435 aa16.7■□□□□ 0.26
LCN1-202ENST00000371781 CDK11AQ9UQ88 783 aaPredicted RBP16.7■□□□□ 0.26
LCN1-202ENST00000371781 CDC42BPBQ9Y5S2 1711 aa16.7■□□□□ 0.26
LCN1-202ENST00000371781 PLEKHD1A6NEE1 506 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms