RNA–Protein interactions for RNA: ENST00000371757.6

KCNT1-202, Transcript of potassium sodium-activated channel subfamily T member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNT1, Length 4,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNT1-202ENST00000371757 CLIP1P30622 1438 aa22.73■■□□□ 1.23
KCNT1-202ENST00000371757 P3H3Q8IVL6 736 aa22.69■■□□□ 1.22
KCNT1-202ENST00000371757 EIF4G2P78344 907 aaKnown RBP eCLIP22.69■■□□□ 1.22
KCNT1-202ENST00000371757 TNNT2P45379 298 aaPredicted RBP22.67■■□□□ 1.22
KCNT1-202ENST00000371757 CCER2I3L3R5 266 aa22.66■■□□□ 1.22
KCNT1-202ENST00000371757 SCRIBQ14160 1630 aa22.62■■□□□ 1.21
KCNT1-202ENST00000371757 TNIKQ9UKE5 1360 aa22.59■■□□□ 1.21
KCNT1-202ENST00000371757 EEA1Q15075 1411 aa22.56■■□□□ 1.2
KCNT1-202ENST00000371757 GOLGA3Q08378 1498 aa22.55■■□□□ 1.2
KCNT1-202ENST00000371757 IPO9Q96P70 1041 aaKnown RBP22.49■■□□□ 1.19
KCNT1-202ENST00000371757 FANCIQ9NVI1 1328 aa22.49■■□□□ 1.19
KCNT1-202ENST00000371757 L1TD1Q5T7N2 865 aaKnown RBP22.48■■□□□ 1.19
KCNT1-202ENST00000371757 GOLGA6L22H0YM25 854 aa22.46■■□□□ 1.19
KCNT1-202ENST00000371757 WDR43Q15061 677 aaKnown RBP eCLIP22.46■■□□□ 1.19
KCNT1-202ENST00000371757 SIN3AQ96ST3 1273 aa22.44■■□□□ 1.18
KCNT1-202ENST00000371757 SENP3-EIF4A1A0A087X0R7 540 aa22.43■■□□□ 1.18
KCNT1-202ENST00000371757 ARID3CA6NKF2 412 aa22.43■■□□□ 1.18
KCNT1-202ENST00000371757 PRKCSHP14314 528 aaPredicted RBP22.42■■□□□ 1.18
KCNT1-202ENST00000371757 RSF1Q96T23 1441 aaPredicted RBP22.4■■□□□ 1.18
KCNT1-202ENST00000371757 PNNQ9H307 717 aaKnown RBP22.39■■□□□ 1.18
KCNT1-202ENST00000371757 CHIC2Q9UKJ5 165 aa22.39■■□□□ 1.17
KCNT1-202ENST00000371757 TIMELESSQ9UNS1 1208 aa22.37■■□□□ 1.17
KCNT1-202ENST00000371757 USP35Q9P2H5 1018 aa22.36■■□□□ 1.17
KCNT1-202ENST00000371757 RGS3P49796 1198 aa22.36■■□□□ 1.17
KCNT1-202ENST00000371757 RSPH6AQ9H0K4 717 aa22.35■■□□□ 1.17
KCNT1-202ENST00000371757 DNTTIP2Q5QJE6 756 aaKnown RBP22.33■■□□□ 1.17
KCNT1-202ENST00000371757 PTMAP06454 111 aaKnown RBP22.31■■□□□ 1.16
KCNT1-202ENST00000371757 TCERG1O14776 1098 aaKnown RBP22.31■■□□□ 1.16
KCNT1-202ENST00000371757 NCLP19338 710 aaKnown RBP22.28■■□□□ 1.16
KCNT1-202ENST00000371757 CDK11BP21127 795 aaKnown RBP22.28■■□□□ 1.16
KCNT1-202ENST00000371757 ARID4BQ4LE39 1312 aaPredicted RBP22.27■■□□□ 1.16
KCNT1-202ENST00000371757 ZNF777Q9ULD5 760 aaPredicted RBP22.27■■□□□ 1.16
KCNT1-202ENST00000371757 VSIG10Q8N0Z9 540 aa22.24■■□□□ 1.15
KCNT1-202ENST00000371757 CEP164Q9UPV0 1460 aa22.24■■□□□ 1.15
KCNT1-202ENST00000371757 KCNH8Q96L42 1107 aa22.23■■□□□ 1.15
KCNT1-202ENST00000371757 MTUS2Q5JR59 1369 aa22.23■■□□□ 1.15
KCNT1-202ENST00000371757 HSP90AA2PQ14568 343 aaPredicted RBP22.22■■□□□ 1.15
KCNT1-202ENST00000371757 ANO8Q9HCE9 1232 aaPredicted RBP22.22■■□□□ 1.15
KCNT1-202ENST00000371757 CCNB3Q8WWL7 1395 aa22.21■■□□□ 1.15
KCNT1-202ENST00000371757 MSNP26038 577 aaKnown RBP22.21■■□□□ 1.15
KCNT1-202ENST00000371757 KDM2AQ9Y2K7 1162 aa22.19■■□□□ 1.14
KCNT1-202ENST00000371757 RRP7BPQ9NSQ0 103 aa22.18■■□□□ 1.14
KCNT1-202ENST00000371757 GSE1Q14687 1217 aa22.17■■□□□ 1.14
KCNT1-202ENST00000371757 RB1CC1Q8TDY2 1594 aa22.09■■□□□ 1.13
KCNT1-202ENST00000371757 MYH16Q9H6N6 1097 aa22.09■■□□□ 1.13
KCNT1-202ENST00000371757 GOLGA6L3A6NEY3 463 aa22.08■■□□□ 1.13
KCNT1-202ENST00000371757 VPS8Q8N3P4 1428 aa22.08■■□□□ 1.13
KCNT1-202ENST00000371757 NUDCQ9Y266 331 aa22.06■■□□□ 1.12
KCNT1-202ENST00000371757 SLKQ9H2G2 1235 aaPredicted RBP22.06■■□□□ 1.12
KCNT1-202ENST00000371757 SLC24A1O60721 1099 aa22.06■■□□□ 1.12
KCNT1-202ENST00000371757 HSP90AB1P08238 724 aaKnown RBP22.06■■□□□ 1.12
KCNT1-202ENST00000371757 GZF1Q9H116 711 aaPredicted RBP22.05■■□□□ 1.12
KCNT1-202ENST00000371757 HSCBQ8IWL3 235 aa22.05■■□□□ 1.12
KCNT1-202ENST00000371757 WRNQ14191 1432 aaPredicted RBP eCLIP22.04■■□□□ 1.12
KCNT1-202ENST00000371757 HSPA5P11021 654 aaKnown RBP22.04■■□□□ 1.12
KCNT1-202ENST00000371757 RCAN3Q9UKA8 241 aa22.04■■□□□ 1.12
KCNT1-202ENST00000371757 SETD5Q9C0A6 1442 aa22.03■■□□□ 1.12
KCNT1-202ENST00000371757 SPRYD3Q8NCJ5 442 aa22■■□□□ 1.11
KCNT1-202ENST00000371757 PPP1R15AO75807 674 aaPredicted RBP21.99■■□□□ 1.11
KCNT1-202ENST00000371757 CARD11Q9BXL7 1154 aa21.99■■□□□ 1.11
KCNT1-202ENST00000371757 PDE4AP27815 886 aa21.98■■□□□ 1.11
KCNT1-202ENST00000371757 SOGA1O94964 1423 aa21.97■■□□□ 1.11
KCNT1-202ENST00000371757 NPM1P06748 294 aaKnown RBP eCLIP21.97■■□□□ 1.11
KCNT1-202ENST00000371757 CHAF1AQ13111 956 aaPredicted RBP21.97■■□□□ 1.11
KCNT1-202ENST00000371757 FTSJ3Q8IY81 847 aaKnown RBP21.97■■□□□ 1.11
KCNT1-202ENST00000371757 PKNOX2Q96KN3 472 aa21.97■■□□□ 1.11
KCNT1-202ENST00000371757 ARID3AQ99856 593 aa21.97■■□□□ 1.11
KCNT1-202ENST00000371757 RAB3GAP2Q9H2M9 1393 aa21.96■■□□□ 1.11
KCNT1-202ENST00000371757 DHX57Q6P158 1386 aaKnown RBP21.96■■□□□ 1.11
KCNT1-202ENST00000371757 IL27Q8NEV9 243 aa21.94■■□□□ 1.1
KCNT1-202ENST00000371757 FRAT1Q92837 279 aaPredicted RBP21.94■■□□□ 1.1
KCNT1-202ENST00000371757 AMER1Q5JTC6 1135 aaPredicted RBP21.94■■□□□ 1.1
KCNT1-202ENST00000371757 PLCB2Q00722 1185 aa21.93■■□□□ 1.1
KCNT1-202ENST00000371757 KNSTRNQ9Y448 316 aa21.93■■□□□ 1.1
KCNT1-202ENST00000371757 GBP4Q96PP9 640 aa21.92■■□□□ 1.1
KCNT1-202ENST00000371757 PTMSP20962 102 aa21.9■■□□□ 1.1
KCNT1-202ENST00000371757 CHMP7Q8WUX9 453 aaPredicted RBP21.89■■□□□ 1.1
KCNT1-202ENST00000371757 TSPY4P0CV99 314 aa21.87■■□□□ 1.09
KCNT1-202ENST00000371757 TSPY10P0CW01 314 aa21.87■■□□□ 1.09
KCNT1-202ENST00000371757 KANK4Q5T7N3 995 aaPredicted RBP21.87■■□□□ 1.09
KCNT1-202ENST00000371757 CASC1Q6TDU7 716 aa21.86■■□□□ 1.09
KCNT1-202ENST00000371757 SLC4A3P48751 1232 aa21.86■■□□□ 1.09
KCNT1-202ENST00000371757 ESF1Q9H501 851 aaKnown RBP21.86■■□□□ 1.09
KCNT1-202ENST00000371757 ZBED9Q6R2W3 1325 aa21.85■■□□□ 1.09
KCNT1-202ENST00000371757 NACADO15069 1562 aa21.85■■□□□ 1.09
KCNT1-202ENST00000371757 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.84■■□□□ 1.09
KCNT1-202ENST00000371757 CC2D1BQ5T0F9 858 aaKnown RBP21.82■■□□□ 1.08
KCNT1-202ENST00000371757 MS4A1P11836 297 aa21.82■■□□□ 1.08
KCNT1-202ENST00000371757 TPRNQ4KMQ1 711 aa21.82■■□□□ 1.08
KCNT1-202ENST00000371757 NEUROD2Q15784 382 aa21.81■■□□□ 1.08
KCNT1-202ENST00000371757 CDCA8Q53HL2 280 aa21.81■■□□□ 1.08
KCNT1-202ENST00000371757 KIAA2012Q0VF49 1180 aa21.8■■□□□ 1.08
KCNT1-202ENST00000371757 BRPF3Q9ULD4 1205 aa21.79■■□□□ 1.08
KCNT1-202ENST00000371757 CHGAP10645 457 aaKnown RBP21.78■■□□□ 1.08
KCNT1-202ENST00000371757 PAK3O75914 559 aaPredicted RBP21.77■■□□□ 1.08
KCNT1-202ENST00000371757 PDE3BQ13370 1112 aa21.77■■□□□ 1.07
KCNT1-202ENST00000371757 NFKBIBQ15653 356 aa21.77■■□□□ 1.07
KCNT1-202ENST00000371757 FAM161AQ3B820 660 aa21.76■■□□□ 1.07
KCNT1-202ENST00000371757 CFAP53Q96M91 514 aa21.76■■□□□ 1.07
KCNT1-202ENST00000371757 RGL3Q3MIN7 710 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms