RNA–Protein interactions for RNA: ENST00000371520.5

ECHDC2-202, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 1,606 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-202ENST00000371520 CHMP7Q8WUX9 453 aaPredicted RBP31.85■■■□□ 2.69
ECHDC2-202ENST00000371520 CEP170Q5SW79 1584 aa31.8■■■□□ 2.68
ECHDC2-202ENST00000371520 IQGAP2Q13576 1575 aa31.8■■■□□ 2.68
ECHDC2-202ENST00000371520 NUP160Q12769 1436 aa31.77■■■□□ 2.68
ECHDC2-202ENST00000371520 ARHGAP35Q9NRY4 1499 aa31.75■■■□□ 2.67
ECHDC2-202ENST00000371520 RANGAP1P46060 587 aaPredicted RBP31.75■■■□□ 2.67
ECHDC2-202ENST00000371520 FBLN2P98095 1184 aa31.75■■■□□ 2.67
ECHDC2-202ENST00000371520 KIAA0586Q9BVV6 1533 aa31.74■■■□□ 2.67
ECHDC2-202ENST00000371520 EFCAB5A4FU69 1503 aa31.72■■■□□ 2.67
ECHDC2-202ENST00000371520 ARAP1Q96P48 1450 aa31.69■■■□□ 2.66
ECHDC2-202ENST00000371520 SAMD9Q5K651 1589 aa31.68■■■□□ 2.66
ECHDC2-202ENST00000371520 UGGT2Q9NYU1 1516 aa31.64■■■□□ 2.66
ECHDC2-202ENST00000371520 VPS8Q8N3P4 1428 aa31.61■■■□□ 2.65
ECHDC2-202ENST00000371520 FHOD3Q2V2M9 1422 aa31.51■■■□□ 2.63
ECHDC2-202ENST00000371520 KIAA0556O60303 1618 aa31.48■■■□□ 2.63
ECHDC2-202ENST00000371520 CLASP1Q7Z460 1538 aa31.47■■■□□ 2.63
ECHDC2-202ENST00000371520 DISP1Q96F81 1524 aa31.47■■■□□ 2.63
ECHDC2-202ENST00000371520 SHROOM2Q13796 1616 aa31.45■■■□□ 2.62
ECHDC2-202ENST00000371520 P3H3Q8IVL6 736 aa31.44■■■□□ 2.62
ECHDC2-202ENST00000371520 JPH4Q96JJ6 628 aa31.4■■■□□ 2.62
ECHDC2-202ENST00000371520 FMN1Q68DA7 1419 aa31.37■■■□□ 2.61
ECHDC2-202ENST00000371520 PCF11O94913 1555 aaKnown RBP31.36■■■□□ 2.61
ECHDC2-202ENST00000371520 CARMIL2Q6F5E8 1435 aa31.34■■■□□ 2.61
ECHDC2-202ENST00000371520 FYCO1Q9BQS8 1478 aa31.29■■■□□ 2.6
ECHDC2-202ENST00000371520 PRG4Q92954 1404 aaPredicted RBP31.28■■■□□ 2.6
ECHDC2-202ENST00000371520 CASKIN1Q8WXD9 1431 aa31.28■■■□□ 2.6
ECHDC2-202ENST00000371520 OSCARQ8IYS5 282 aa31.2■■■□□ 2.59
ECHDC2-202ENST00000371520 CFAP43Q8NDM7 1665 aa31.18■■■□□ 2.58
ECHDC2-202ENST00000371520 ERCC6L2Q5T890 1561 aa31.17■■■□□ 2.58
ECHDC2-202ENST00000371520 MAP3K1Q13233 1512 aa31.17■■■□□ 2.58
ECHDC2-202ENST00000371520 LRRIQ1Q96JM4 1722 aa31.16■■■□□ 2.58
ECHDC2-202ENST00000371520 APLP2Q06481 763 aa31.16■■■□□ 2.58
ECHDC2-202ENST00000371520 TIAM1Q13009 1591 aa31.15■■■□□ 2.58
ECHDC2-202ENST00000371520 HECW1Q76N89 1606 aa31.15■■■□□ 2.58
ECHDC2-202ENST00000371520 RAPGEF6Q8TEU7 1601 aa31.13■■■□□ 2.57
ECHDC2-202ENST00000371520 PPARGC1BQ86YN6 1023 aaKnown RBP31.07■■■□□ 2.56
ECHDC2-202ENST00000371520 ABCA8O94911 1581 aa31.05■■■□□ 2.56
ECHDC2-202ENST00000371520 PTPRGP23470 1445 aa31.04■■■□□ 2.56
ECHDC2-202ENST00000371520 PLB1Q6P1J6 1458 aa31.04■■■□□ 2.56
ECHDC2-202ENST00000371520 ATP1B4Q9UN42 357 aaPredicted RBP31.03■■■□□ 2.56
ECHDC2-202ENST00000371520 TTBK1Q5TCY1 1321 aaPredicted RBP31.03■■■□□ 2.56
ECHDC2-202ENST00000371520 CCDC18Q5T9S5 1454 aa31.03■■■□□ 2.56
ECHDC2-202ENST00000371520 NUP153P49790 1475 aaKnown RBP31■■■□□ 2.55
ECHDC2-202ENST00000371520 EPRSP07814 1512 aaKnown RBP30.99■■■□□ 2.55
ECHDC2-202ENST00000371520 LRRC9Q6ZRR7 1453 aa30.97■■■□□ 2.55
ECHDC2-202ENST00000371520 KANK4Q5T7N3 995 aaPredicted RBP30.95■■■□□ 2.55
ECHDC2-202ENST00000371520 CDK13Q14004 1512 aaKnown RBP30.93■■■□□ 2.54
ECHDC2-202ENST00000371520 UACAQ9BZF9 1416 aa30.88■■■□□ 2.53
ECHDC2-202ENST00000371520 ABCC2Q92887 1545 aa30.86■■■□□ 2.53
ECHDC2-202ENST00000371520 TRIM26Q12899 539 aaPredicted RBP30.85■■■□□ 2.53
ECHDC2-202ENST00000371520 EHBP1L1Q8N3D4 1523 aa30.84■■■□□ 2.53
ECHDC2-202ENST00000371520 MAGI3Q5TCQ9 1506 aa30.83■■■□□ 2.53
ECHDC2-202ENST00000371520 UHRF1BP1LA0JNW5 1464 aa30.8■■■□□ 2.52
ECHDC2-202ENST00000371520 MTUS2Q5JR59 1369 aa30.8■■■□□ 2.52
ECHDC2-202ENST00000371520 ARHGEF11O15085 1522 aa30.79■■■□□ 2.52
ECHDC2-202ENST00000371520 ARID3CA6NKF2 412 aa30.77■■■□□ 2.52
ECHDC2-202ENST00000371520 ATP10BO94823 1461 aa30.76■■■□□ 2.52
ECHDC2-202ENST00000371520 SUPT6HQ7KZ85 1726 aaKnown RBP30.75■■■□□ 2.51
ECHDC2-202ENST00000371520 ADCY10Q96PN6 1610 aa30.72■■■□□ 2.51
ECHDC2-202ENST00000371520 RIMBP3CA6NJZ7 1639 aa30.69■■■□□ 2.5
ECHDC2-202ENST00000371520 RIMBP3BA6NNM3 1639 aa30.69■■■□□ 2.5
ECHDC2-202ENST00000371520 RIMBP3Q9UFD9 1639 aa30.69■■■□□ 2.5
ECHDC2-202ENST00000371520 PCGF6Q9BYE7 350 aa30.68■■■□□ 2.5
ECHDC2-202ENST00000371520 CDK11AQ9UQ88 783 aaPredicted RBP30.67■■■□□ 2.5
ECHDC2-202ENST00000371520 ZCCHC11Q5TAX3 1644 aaKnown RBP30.67■■■□□ 2.5
ECHDC2-202ENST00000371520 KDM5BQ9UGL1 1544 aa30.67■■■□□ 2.5
ECHDC2-202ENST00000371520 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.66■■■□□ 2.5
ECHDC2-202ENST00000371520 HNRNPUL2Q1KMD3 747 aaKnown RBP30.66■■■□□ 2.5
ECHDC2-202ENST00000371520 TROQ12816 1431 aaPredicted RBP30.65■■■□□ 2.5
ECHDC2-202ENST00000371520 NCOA2Q15596 1464 aa30.65■■■□□ 2.5
ECHDC2-202ENST00000371520 PHLDB1Q86UU1 1377 aa30.62■■■□□ 2.49
ECHDC2-202ENST00000371520 RRBP1Q9P2E9 1410 aaKnown RBP30.6■■■□□ 2.49
ECHDC2-202ENST00000371520 KIF14Q15058 1648 aa30.56■■■□□ 2.48
ECHDC2-202ENST00000371520 PLEKHD1A6NEE1 506 aa30.54■■■□□ 2.48
ECHDC2-202ENST00000371520 MYOM3Q5VTT5 1437 aa30.51■■■□□ 2.47
ECHDC2-202ENST00000371520 CCNB3Q8WWL7 1395 aa30.49■■■□□ 2.47
ECHDC2-202ENST00000371520 FGD6Q6ZV73 1430 aa30.47■■■□□ 2.47
ECHDC2-202ENST00000371520 ITSN2Q9NZM3 1697 aa30.44■■■□□ 2.46
ECHDC2-202ENST00000371520 ABCC10Q5T3U5 1492 aa30.43■■■□□ 2.46
ECHDC2-202ENST00000371520 CDC42BPAQ5VT25 1732 aa30.39■■■□□ 2.46
ECHDC2-202ENST00000371520 PTPN23Q9H3S7 1636 aa30.38■■■□□ 2.45
ECHDC2-202ENST00000371520 DNAJC5Q9H3Z4 198 aa30.38■■■□□ 2.45
ECHDC2-202ENST00000371520 WDR7Q9Y4E6 1490 aa30.38■■■□□ 2.45
ECHDC2-202ENST00000371520 MIA2Q96PC5 1412 aa30.38■■■□□ 2.45
ECHDC2-202ENST00000371520 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.37■■■□□ 2.45
ECHDC2-202ENST00000371520 CYB5RLQ6IPT4 315 aa30.36■■■□□ 2.45
ECHDC2-202ENST00000371520 GPATCH8Q9UKJ3 1502 aaKnown RBP30.35■■■□□ 2.45
ECHDC2-202ENST00000371520 TTC37Q6PGP7 1564 aa30.34■■■□□ 2.45
ECHDC2-202ENST00000371520 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.34■■■□□ 2.45
ECHDC2-202ENST00000371520 TCOF1Q13428 1488 aaKnown RBP30.33■■■□□ 2.45
ECHDC2-202ENST00000371520 ASXL2Q76L83 1435 aa30.33■■■□□ 2.45
ECHDC2-202ENST00000371520 NPM1P06748 294 aaKnown RBP eCLIP30.32■■■□□ 2.44
ECHDC2-202ENST00000371520 PREX2Q70Z35 1606 aa30.3■■■□□ 2.44
ECHDC2-202ENST00000371520 MYO5CQ9NQX4 1742 aa30.28■■■□□ 2.44
ECHDC2-202ENST00000371520 FAM50AQ14320 339 aaKnown RBP30.26■■■□□ 2.44
ECHDC2-202ENST00000371520 CDC42BPBQ9Y5S2 1711 aa30.26■■■□□ 2.43
ECHDC2-202ENST00000371520 MAPKBP1O60336 1514 aa30.26■■■□□ 2.43
ECHDC2-202ENST00000371520 KCNH8Q96L42 1107 aa30.22■■■□□ 2.43
ECHDC2-202ENST00000371520 ABCA9Q8IUA7 1624 aa30.22■■■□□ 2.43
ECHDC2-202ENST00000371520 CFDP1Q9UEE9 299 aaPredicted RBP30.19■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms