RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 DHX57Q6P158 1386 aaKnown RBP17.19■□□□□ 0.34
PDE6C-201ENST00000371447 URB2Q14146 1524 aaKnown RBP17.18■□□□□ 0.34
PDE6C-201ENST00000371447 PHLDB1Q86UU1 1377 aa17.17■□□□□ 0.34
PDE6C-201ENST00000371447 SIN3AQ96ST3 1273 aa17.17■□□□□ 0.34
PDE6C-201ENST00000371447 PDS5BQ9NTI5 1447 aa17.15■□□□□ 0.34
PDE6C-201ENST00000371447 DNMBPQ6XZF7 1577 aa17.14■□□□□ 0.34
PDE6C-201ENST00000371447 ACIN1Q9UKV3 1341 aaKnown RBP17.14■□□□□ 0.33
PDE6C-201ENST00000371447 HIRIP3Q9BW71 556 aaPredicted RBP17.14■□□□□ 0.33
PDE6C-201ENST00000371447 CENPBP07199 599 aaPredicted RBP17.13■□□□□ 0.33
PDE6C-201ENST00000371447 RAB3GAP2Q9H2M9 1393 aa17.12■□□□□ 0.33
PDE6C-201ENST00000371447 AQRO60306 1485 aaKnown RBP eCLIP17.12■□□□□ 0.33
PDE6C-201ENST00000371447 CHIC2Q9UKJ5 165 aa17.12■□□□□ 0.33
PDE6C-201ENST00000371447 GTF3C3Q9Y5Q9 886 aa17.11■□□□□ 0.33
PDE6C-201ENST00000371447 ABCA10Q8WWZ4 1543 aa17.11■□□□□ 0.33
PDE6C-201ENST00000371447 MTUS2Q5JR59 1369 aa17.1■□□□□ 0.33
PDE6C-201ENST00000371447 MYT1Q01538 1121 aa17.1■□□□□ 0.33
PDE6C-201ENST00000371447 GAPVD1Q14C86 1478 aa17.09■□□□□ 0.33
PDE6C-201ENST00000371447 FHAD1B1AJZ9 1412 aa17.09■□□□□ 0.33
PDE6C-201ENST00000371447 RRBP1Q9P2E9 1410 aaKnown RBP17.08■□□□□ 0.32
PDE6C-201ENST00000371447 PRDM2Q13029 1718 aa17.07■□□□□ 0.32
PDE6C-201ENST00000371447 LRRC9Q6ZRR7 1453 aa17.07■□□□□ 0.32
PDE6C-201ENST00000371447 TIAM1Q13009 1591 aa17.03■□□□□ 0.32
PDE6C-201ENST00000371447 RRP7BPQ9NSQ0 103 aa17.03■□□□□ 0.32
PDE6C-201ENST00000371447 PCF11O94913 1555 aaKnown RBP17.02■□□□□ 0.32
PDE6C-201ENST00000371447 LAMC3Q9Y6N6 1575 aa17■□□□□ 0.31
PDE6C-201ENST00000371447 SETD5Q9C0A6 1442 aa16.98■□□□□ 0.31
PDE6C-201ENST00000371447 TRIM52Q96A61 297 aa16.98■□□□□ 0.31
PDE6C-201ENST00000371447 KIF21AQ7Z4S6 1674 aa16.95■□□□□ 0.3
PDE6C-201ENST00000371447 FMN1Q68DA7 1419 aa16.94■□□□□ 0.3
PDE6C-201ENST00000371447 CHMP7Q8WUX9 453 aaPredicted RBP16.93■□□□□ 0.3
PDE6C-201ENST00000371447 ZNF608Q9ULD9 1512 aaPredicted RBP16.93■□□□□ 0.3
PDE6C-201ENST00000371447 DDX10Q13206 875 aaKnown RBP16.93■□□□□ 0.3
PDE6C-201ENST00000371447 CASKIN1Q8WXD9 1431 aa16.92■□□□□ 0.3
PDE6C-201ENST00000371447 ERCC6Q03468 1493 aa16.92■□□□□ 0.3
PDE6C-201ENST00000371447 CLSPNQ9HAW4 1339 aa16.91■□□□□ 0.3
PDE6C-201ENST00000371447 ZNF777Q9ULD5 760 aaPredicted RBP16.9■□□□□ 0.3
PDE6C-201ENST00000371447 FOXD1Q16676 465 aa16.88■□□□□ 0.29
PDE6C-201ENST00000371447 KCNH8Q96L42 1107 aa16.88■□□□□ 0.29
PDE6C-201ENST00000371447 FYCO1Q9BQS8 1478 aa16.86■□□□□ 0.29
PDE6C-201ENST00000371447 FGD6Q6ZV73 1430 aa16.85■□□□□ 0.29
PDE6C-201ENST00000371447 CUL7Q14999 1698 aa16.84■□□□□ 0.29
PDE6C-201ENST00000371447 ZNF644Q9H582 1327 aaPredicted RBP16.83■□□□□ 0.28
PDE6C-201ENST00000371447 MRC2Q9UBG0 1479 aa16.82■□□□□ 0.28
PDE6C-201ENST00000371447 PTPRKQ15262 1439 aa16.82■□□□□ 0.28
PDE6C-201ENST00000371447 EFCAB5A4FU69 1503 aa16.81■□□□□ 0.28
PDE6C-201ENST00000371447 NCOA2Q15596 1464 aa16.81■□□□□ 0.28
PDE6C-201ENST00000371447 ABCA5Q8WWZ7 1642 aa16.8■□□□□ 0.28
PDE6C-201ENST00000371447 CNGB1Q14028 1251 aaPredicted RBP16.8■□□□□ 0.28
PDE6C-201ENST00000371447 SNAPC4Q5SXM2 1469 aa16.79■□□□□ 0.28
PDE6C-201ENST00000371447 TONSLQ96HA7 1378 aa16.79■□□□□ 0.28
PDE6C-201ENST00000371447 MAPKBP1O60336 1514 aa16.78■□□□□ 0.28
PDE6C-201ENST00000371447 MAP3K1Q13233 1512 aa16.78■□□□□ 0.28
PDE6C-201ENST00000371447 CDK13Q14004 1512 aaKnown RBP16.78■□□□□ 0.28
PDE6C-201ENST00000371447 CTTNBP2Q8WZ74 1663 aa16.77■□□□□ 0.28
PDE6C-201ENST00000371447 GRIN2BQ13224 1484 aa16.76■□□□□ 0.27
PDE6C-201ENST00000371447 TARBP1Q13395 1621 aaKnown RBP16.75■□□□□ 0.27
PDE6C-201ENST00000371447 MYOM3Q5VTT5 1437 aa16.74■□□□□ 0.27
PDE6C-201ENST00000371447 PPP1R15AO75807 674 aaPredicted RBP16.73■□□□□ 0.27
PDE6C-201ENST00000371447 CCDC18Q5T9S5 1454 aa16.72■□□□□ 0.27
PDE6C-201ENST00000371447 WDR97A6NE52 1622 aa16.72■□□□□ 0.27
PDE6C-201ENST00000371447 CFAP43Q8NDM7 1665 aa16.71■□□□□ 0.27
PDE6C-201ENST00000371447 JPH4Q96JJ6 628 aa16.71■□□□□ 0.27
PDE6C-201ENST00000371447 ZNF326Q5BKZ1 582 aaKnown RBP16.7■□□□□ 0.26
PDE6C-201ENST00000371447 MAGI3Q5TCQ9 1506 aa16.69■□□□□ 0.26
PDE6C-201ENST00000371447 CDK11AQ9UQ88 783 aaPredicted RBP16.68■□□□□ 0.26
PDE6C-201ENST00000371447 IQGAP2Q13576 1575 aa16.68■□□□□ 0.26
PDE6C-201ENST00000371447 CFDP1Q9UEE9 299 aaPredicted RBP16.68■□□□□ 0.26
PDE6C-201ENST00000371447 IFT140Q96RY7 1462 aa16.67■□□□□ 0.26
PDE6C-201ENST00000371447 POLR3GLQ9BT43 218 aa16.67■□□□□ 0.26
PDE6C-201ENST00000371447 EPRSP07814 1512 aaKnown RBP16.66■□□□□ 0.26
PDE6C-201ENST00000371447 NAIPQ13075 1403 aa16.65■□□□□ 0.26
PDE6C-201ENST00000371447 SAMD9Q5K651 1589 aa16.64■□□□□ 0.26
PDE6C-201ENST00000371447 MPHOSPH9Q99550 1183 aa16.64■□□□□ 0.25
PDE6C-201ENST00000371447 SLC4A1APQ9BWU0 796 aaKnown RBP16.64■□□□□ 0.25
PDE6C-201ENST00000371447 PRG4Q92954 1404 aaPredicted RBP16.63■□□□□ 0.25
PDE6C-201ENST00000371447 PBRM1Q86U86 1689 aa16.62■□□□□ 0.25
PDE6C-201ENST00000371447 ADAMTS12P58397 1594 aa16.62■□□□□ 0.25
PDE6C-201ENST00000371447 THOC2Q8NI27 1593 aaKnown RBP16.62■□□□□ 0.25
PDE6C-201ENST00000371447 HFM1A2PYH4 1435 aa16.61■□□□□ 0.25
PDE6C-201ENST00000371447 PLB1Q6P1J6 1458 aa16.61■□□□□ 0.25
PDE6C-201ENST00000371447 BCANQ96GW7 911 aa16.61■□□□□ 0.25
PDE6C-201ENST00000371447 LRRIQ1Q96JM4 1722 aa16.61■□□□□ 0.25
PDE6C-201ENST00000371447 GRIN2AQ12879 1464 aa16.59■□□□□ 0.25
PDE6C-201ENST00000371447 ANP32CO43423 234 aa16.59■□□□□ 0.25
PDE6C-201ENST00000371447 UACAQ9BZF9 1416 aa16.59■□□□□ 0.25
PDE6C-201ENST00000371447 PLEKHD1A6NEE1 506 aa16.58■□□□□ 0.25
PDE6C-201ENST00000371447 EHBP1L1Q8N3D4 1523 aa16.58■□□□□ 0.25
PDE6C-201ENST00000371447 SUPT6HQ7KZ85 1726 aaKnown RBP16.58■□□□□ 0.24
PDE6C-201ENST00000371447 L3MBTL2Q969R5 705 aa16.58■□□□□ 0.24
PDE6C-201ENST00000371447 KIAA0586Q9BVV6 1533 aa16.57■□□□□ 0.24
PDE6C-201ENST00000371447 PTPN23Q9H3S7 1636 aa16.57■□□□□ 0.24
PDE6C-201ENST00000371447 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.56■□□□□ 0.24
PDE6C-201ENST00000371447 DISP1Q96F81 1524 aa16.55■□□□□ 0.24
PDE6C-201ENST00000371447 EIF4G3O43432 1585 aaKnown RBP16.54■□□□□ 0.24
PDE6C-201ENST00000371447 UGGT2Q9NYU1 1516 aa16.54■□□□□ 0.24
PDE6C-201ENST00000371447 HECW1Q76N89 1606 aa16.54■□□□□ 0.24
PDE6C-201ENST00000371447 HSPA5P11021 654 aaKnown RBP16.53■□□□□ 0.24
PDE6C-201ENST00000371447 HNRNPMP52272 730 aaKnown RBP eCLIP16.53■□□□□ 0.24
PDE6C-201ENST00000371447 WDR62O43379 1518 aa16.52■□□□□ 0.24
PDE6C-201ENST00000371447 NUP153P49790 1475 aaKnown RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms