RNA–Protein interactions for RNA: ENST00000371438.5

RUNX2-204, Transcript of runt related transcription factor 2, humanhuman

APPRIS P4 TSL 5 BASIC

Gene RUNX2, Length 5,698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX2-204ENST00000371438 CFDP1Q9UEE9 299 aaPredicted RBP23.04■■□□□ 1.28
RUNX2-204ENST00000371438 CHGAP10645 457 aaKnown RBP23.02■■□□□ 1.28
RUNX2-204ENST00000371438 RAPGEF2Q9Y4G8 1499 aa22.98■■□□□ 1.27
RUNX2-204ENST00000371438 STAG3Q9UJ98 1225 aa22.97■■□□□ 1.27
RUNX2-204ENST00000371438 CCNB3Q8WWL7 1395 aa22.92■■□□□ 1.26
RUNX2-204ENST00000371438 CARMIL2Q6F5E8 1435 aa22.92■■□□□ 1.26
RUNX2-204ENST00000371438 FMN1Q68DA7 1419 aa22.89■■□□□ 1.26
RUNX2-204ENST00000371438 RUSC2Q8N2Y8 1516 aa22.83■■□□□ 1.25
RUNX2-204ENST00000371438 DDX10Q13206 875 aaKnown RBP22.83■■□□□ 1.25
RUNX2-204ENST00000371438 ARHGAP35Q9NRY4 1499 aa22.83■■□□□ 1.25
RUNX2-204ENST00000371438 KDM2AQ9Y2K7 1162 aa22.82■■□□□ 1.24
RUNX2-204ENST00000371438 DAXXQ9UER7 740 aaPredicted RBP22.8■■□□□ 1.24
RUNX2-204ENST00000371438 FGD5Q6ZNL6 1462 aa22.79■■□□□ 1.24
RUNX2-204ENST00000371438 KANK4Q5T7N3 995 aaPredicted RBP22.77■■□□□ 1.24
RUNX2-204ENST00000371438 HMGXB3Q12766 1538 aa22.77■■□□□ 1.24
RUNX2-204ENST00000371438 NEFMP07197 916 aa22.75■■□□□ 1.23
RUNX2-204ENST00000371438 GTF3C3Q9Y5Q9 886 aa22.75■■□□□ 1.23
RUNX2-204ENST00000371438 CLSPNQ9HAW4 1339 aa22.74■■□□□ 1.23
RUNX2-204ENST00000371438 PLPPR3Q6T4P5 718 aa22.73■■□□□ 1.23
RUNX2-204ENST00000371438 EIF4G2P78344 907 aaKnown RBP eCLIP22.73■■□□□ 1.23
RUNX2-204ENST00000371438 FHOD3Q2V2M9 1422 aa22.72■■□□□ 1.23
RUNX2-204ENST00000371438 BICRAQ9NZM4 1560 aa22.71■■□□□ 1.23
RUNX2-204ENST00000371438 CC2D2AQ9P2K1 1620 aa22.71■■□□□ 1.23
RUNX2-204ENST00000371438 CFTRP13569 1480 aa22.7■■□□□ 1.22
RUNX2-204ENST00000371438 GAPVD1Q14C86 1478 aa22.65■■□□□ 1.22
RUNX2-204ENST00000371438 SETD5Q9C0A6 1442 aa22.64■■□□□ 1.22
RUNX2-204ENST00000371438 RAD54L2Q9Y4B4 1467 aa22.64■■□□□ 1.21
RUNX2-204ENST00000371438 IGF1RP08069 1367 aa22.64■■□□□ 1.21
RUNX2-204ENST00000371438 HIRIP3Q9BW71 556 aaPredicted RBP22.6■■□□□ 1.21
RUNX2-204ENST00000371438 RGL3Q3MIN7 710 aa22.6■■□□□ 1.21
RUNX2-204ENST00000371438 JPH4Q96JJ6 628 aa22.59■■□□□ 1.21
RUNX2-204ENST00000371438 CANXP27824 592 aaKnown RBP22.58■■□□□ 1.2
RUNX2-204ENST00000371438 SIN3AQ96ST3 1273 aa22.57■■□□□ 1.2
RUNX2-204ENST00000371438 FAM9BQ8IZU0 186 aa22.55■■□□□ 1.2
RUNX2-204ENST00000371438 HNRNPUQ00839 825 aaKnown RBP eCLIP22.55■■□□□ 1.2
RUNX2-204ENST00000371438 SYNJ1O43426 1573 aa22.54■■□□□ 1.2
RUNX2-204ENST00000371438 TMC1Q8TDI8 760 aa22.54■■□□□ 1.2
RUNX2-204ENST00000371438 CCDC18Q5T9S5 1454 aa22.53■■□□□ 1.2
RUNX2-204ENST00000371438 PPP1R15AO75807 674 aaPredicted RBP22.51■■□□□ 1.19
RUNX2-204ENST00000371438 TIMELESSQ9UNS1 1208 aa22.51■■□□□ 1.19
RUNX2-204ENST00000371438 ARID4BQ4LE39 1312 aaPredicted RBP22.5■■□□□ 1.19
RUNX2-204ENST00000371438 KANK1Q14678 1352 aa22.5■■□□□ 1.19
RUNX2-204ENST00000371438 MIER1Q8N108 512 aa22.49■■□□□ 1.19
RUNX2-204ENST00000371438 NESP48681 1621 aa22.49■■□□□ 1.19
RUNX2-204ENST00000371438 MRS2Q9HD23 443 aa22.48■■□□□ 1.19
RUNX2-204ENST00000371438 CARD11Q9BXL7 1154 aa22.47■■□□□ 1.19
RUNX2-204ENST00000371438 SLC24A1O60721 1099 aa22.46■■□□□ 1.19
RUNX2-204ENST00000371438 TOP2BQ02880 1626 aa22.46■■□□□ 1.19
RUNX2-204ENST00000371438 EFCAB2Q5VUJ9 269 aa22.46■■□□□ 1.19
RUNX2-204ENST00000371438 KIF21BO75037 1637 aa22.46■■□□□ 1.19
RUNX2-204ENST00000371438 RAB3GAP2Q9H2M9 1393 aa22.45■■□□□ 1.18
RUNX2-204ENST00000371438 ZBTB47Q9UFB7 747 aaPredicted RBP22.44■■□□□ 1.18
RUNX2-204ENST00000371438 MRC2Q9UBG0 1479 aa22.43■■□□□ 1.18
RUNX2-204ENST00000371438 ANKRD30AQ9BXX3 1397 aa22.43■■□□□ 1.18
RUNX2-204ENST00000371438 UNC13AQ9UPW8 1703 aa22.43■■□□□ 1.18
RUNX2-204ENST00000371438 AQRO60306 1485 aaKnown RBP eCLIP22.42■■□□□ 1.18
RUNX2-204ENST00000371438 ERICH3Q5RHP9 1530 aa22.42■■□□□ 1.18
RUNX2-204ENST00000371438 WDR43Q15061 677 aaKnown RBP eCLIP22.42■■□□□ 1.18
RUNX2-204ENST00000371438 CDCA8Q53HL2 280 aa22.42■■□□□ 1.18
RUNX2-204ENST00000371438 CUX1P39880 1505 aa22.4■■□□□ 1.18
RUNX2-204ENST00000371438 GRIN2BQ13224 1484 aa22.38■■□□□ 1.17
RUNX2-204ENST00000371438 PTPRGP23470 1445 aa22.38■■□□□ 1.17
RUNX2-204ENST00000371438 TOPBP1Q92547 1522 aa22.38■■□□□ 1.17
RUNX2-204ENST00000371438 PEG3Q9GZU2 1588 aa22.36■■□□□ 1.17
RUNX2-204ENST00000371438 RSPH4AQ5TD94 716 aa22.35■■□□□ 1.17
RUNX2-204ENST00000371438 PKD2Q13563 968 aa22.34■■□□□ 1.17
RUNX2-204ENST00000371438 SENP3Q9H4L4 574 aaPredicted RBP22.34■■□□□ 1.17
RUNX2-204ENST00000371438 IFT140Q96RY7 1462 aa22.32■■□□□ 1.16
RUNX2-204ENST00000371438 DNMBPQ6XZF7 1577 aa22.32■■□□□ 1.16
RUNX2-204ENST00000371438 MPHOSPH9Q99550 1183 aa22.32■■□□□ 1.16
RUNX2-204ENST00000371438 DCAF11Q8TEB1 546 aa22.31■■□□□ 1.16
RUNX2-204ENST00000371438 SALL2Q9Y467 1007 aaPredicted RBP22.31■■□□□ 1.16
RUNX2-204ENST00000371438 FKBP8Q14318 412 aa22.31■■□□□ 1.16
RUNX2-204ENST00000371438 POLA1P09884 1462 aaPredicted RBP22.3■■□□□ 1.16
RUNX2-204ENST00000371438 NUP155O75694 1391 aa22.29■■□□□ 1.16
RUNX2-204ENST00000371438 HNRNPMP52272 730 aaKnown RBP eCLIP22.29■■□□□ 1.16
RUNX2-204ENST00000371438 LAMC3Q9Y6N6 1575 aa22.26■■□□□ 1.15
RUNX2-204ENST00000371438 KNSTRNQ9Y448 316 aa22.26■■□□□ 1.15
RUNX2-204ENST00000371438 MYT1Q01538 1121 aa22.25■■□□□ 1.15
RUNX2-204ENST00000371438 PRXQ9BXM0 1461 aa22.24■■□□□ 1.15
RUNX2-204ENST00000371438 FOXD1Q16676 465 aa22.24■■□□□ 1.15
RUNX2-204ENST00000371438 TRHP20396 242 aaPredicted RBP22.24■■□□□ 1.15
RUNX2-204ENST00000371438 GGT6Q6P531 493 aa22.23■■□□□ 1.15
RUNX2-204ENST00000371438 OSCARQ8IYS5 282 aa22.23■■□□□ 1.15
RUNX2-204ENST00000371438 SPAG9O60271 1321 aaKnown RBP22.21■■□□□ 1.15
RUNX2-204ENST00000371438 CASKIN1Q8WXD9 1431 aa22.2■■□□□ 1.14
RUNX2-204ENST00000371438 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.19■■□□□ 1.14
RUNX2-204ENST00000371438 POGKQ9P215 609 aa22.18■■□□□ 1.14
RUNX2-204ENST00000371438 MLECQ14165 292 aa22.17■■□□□ 1.14
RUNX2-204ENST00000371438 TMF1P82094 1093 aa22.16■■□□□ 1.14
RUNX2-204ENST00000371438 EFCAB5A4FU69 1503 aa22.16■■□□□ 1.14
RUNX2-204ENST00000371438 RTL5Q5HYW3 569 aaPredicted RBP22.15■■□□□ 1.14
RUNX2-204ENST00000371438 CFAP53Q96M91 514 aa22.14■■□□□ 1.14
RUNX2-204ENST00000371438 LRRC9Q6ZRR7 1453 aa22.14■■□□□ 1.14
RUNX2-204ENST00000371438 HDGFP51858 240 aaKnown RBP22.14■■□□□ 1.13
RUNX2-204ENST00000371438 C14orf37Q86TY3 774 aa22.14■■□□□ 1.13
RUNX2-204ENST00000371438 PRDM2Q13029 1718 aa22.14■■□□□ 1.13
RUNX2-204ENST00000371438 KIF3BO15066 747 aa22.13■■□□□ 1.13
RUNX2-204ENST00000371438 ARAP1Q96P48 1450 aa22.13■■□□□ 1.13
RUNX2-204ENST00000371438 HSPA5P11021 654 aaKnown RBP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms