RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 ARHGEF11O15085 1522 aa26.31■■□□□ 1.8
PFDN4-201ENST00000371419 RIMBP3CA6NJZ7 1639 aa26.28■■□□□ 1.8
PFDN4-201ENST00000371419 RIMBP3BA6NNM3 1639 aa26.28■■□□□ 1.8
PFDN4-201ENST00000371419 RIMBP3Q9UFD9 1639 aa26.28■■□□□ 1.8
PFDN4-201ENST00000371419 SHROOM2Q13796 1616 aa26.27■■□□□ 1.8
PFDN4-201ENST00000371419 JPH4Q96JJ6 628 aa26.27■■□□□ 1.8
PFDN4-201ENST00000371419 KIF21BO75037 1637 aa26.25■■□□□ 1.79
PFDN4-201ENST00000371419 IQGAP2Q13576 1575 aa26.22■■□□□ 1.79
PFDN4-201ENST00000371419 PRG4Q92954 1404 aaPredicted RBP26.2■■□□□ 1.78
PFDN4-201ENST00000371419 CTTNBP2Q8WZ74 1663 aa26.19■■□□□ 1.78
PFDN4-201ENST00000371419 ERCC6L2Q5T890 1561 aa26.15■■□□□ 1.78
PFDN4-201ENST00000371419 GOLGA3Q08378 1498 aa26.14■■□□□ 1.77
PFDN4-201ENST00000371419 ARAP1Q96P48 1450 aa26.12■■□□□ 1.77
PFDN4-201ENST00000371419 EHMT2Q96KQ7 1210 aa26.11■■□□□ 1.77
PFDN4-201ENST00000371419 UGGT2Q9NYU1 1516 aa26.1■■□□□ 1.77
PFDN4-201ENST00000371419 CYB5RLQ6IPT4 315 aa26.08■■□□□ 1.77
PFDN4-201ENST00000371419 CARMIL2Q6F5E8 1435 aa26.06■■□□□ 1.76
PFDN4-201ENST00000371419 UBTFP17480 764 aaKnown RBP26.06■■□□□ 1.76
PFDN4-201ENST00000371419 DISP1Q96F81 1524 aa26.02■■□□□ 1.76
PFDN4-201ENST00000371419 KIAA0556O60303 1618 aa25.96■■□□□ 1.75
PFDN4-201ENST00000371419 TNIKQ9UKE5 1360 aa25.95■■□□□ 1.75
PFDN4-201ENST00000371419 PTPRGP23470 1445 aa25.92■■□□□ 1.74
PFDN4-201ENST00000371419 RANGAP1P46060 587 aaPredicted RBP25.91■■□□□ 1.74
PFDN4-201ENST00000371419 TTBK1Q5TCY1 1321 aaPredicted RBP25.89■■□□□ 1.73
PFDN4-201ENST00000371419 SAMD9Q5K651 1589 aa25.88■■□□□ 1.73
PFDN4-201ENST00000371419 P3H3Q8IVL6 736 aa25.84■■□□□ 1.73
PFDN4-201ENST00000371419 EFCAB5A4FU69 1503 aa25.83■■□□□ 1.73
PFDN4-201ENST00000371419 LOC105371045A0A1W2PR82 267 aa25.79■■□□□ 1.72
PFDN4-201ENST00000371419 UACAQ9BZF9 1416 aa25.75■■□□□ 1.71
PFDN4-201ENST00000371419 FHOD3Q2V2M9 1422 aa25.75■■□□□ 1.71
PFDN4-201ENST00000371419 ADCY10Q96PN6 1610 aa25.74■■□□□ 1.71
PFDN4-201ENST00000371419 ARHGAP35Q9NRY4 1499 aa25.73■■□□□ 1.71
PFDN4-201ENST00000371419 UHRF1BP1LA0JNW5 1464 aa25.71■■□□□ 1.71
PFDN4-201ENST00000371419 ABCC2Q92887 1545 aa25.69■■□□□ 1.7
PFDN4-201ENST00000371419 PLB1Q6P1J6 1458 aa25.69■■□□□ 1.7
PFDN4-201ENST00000371419 NPM1P06748 294 aaKnown RBP eCLIP25.68■■□□□ 1.7
PFDN4-201ENST00000371419 CLIP1P30622 1438 aa25.68■■□□□ 1.7
PFDN4-201ENST00000371419 ABCA8O94911 1581 aa25.67■■□□□ 1.7
PFDN4-201ENST00000371419 CEP162Q5TB80 1403 aa25.62■■□□□ 1.69
PFDN4-201ENST00000371419 FMN1Q68DA7 1419 aa25.6■■□□□ 1.69
PFDN4-201ENST00000371419 KDM5BQ9UGL1 1544 aa25.58■■□□□ 1.68
PFDN4-201ENST00000371419 RAPGEF6Q8TEU7 1601 aa25.58■■□□□ 1.68
PFDN4-201ENST00000371419 MAPKBP1O60336 1514 aa25.54■■□□□ 1.68
PFDN4-201ENST00000371419 ZCCHC11Q5TAX3 1644 aaKnown RBP25.51■■□□□ 1.68
PFDN4-201ENST00000371419 NUP153P49790 1475 aaKnown RBP25.49■■□□□ 1.67
PFDN4-201ENST00000371419 ARID3CA6NKF2 412 aa25.47■■□□□ 1.67
PFDN4-201ENST00000371419 ATP10BO94823 1461 aa25.47■■□□□ 1.67
PFDN4-201ENST00000371419 TRHP20396 242 aaPredicted RBP25.47■■□□□ 1.67
PFDN4-201ENST00000371419 ASXL2Q76L83 1435 aa25.46■■□□□ 1.67
PFDN4-201ENST00000371419 ATP1B4Q9UN42 357 aaPredicted RBP25.44■■□□□ 1.66
PFDN4-201ENST00000371419 HECW1Q76N89 1606 aa25.43■■□□□ 1.66
PFDN4-201ENST00000371419 CASKIN1Q8WXD9 1431 aa25.42■■□□□ 1.66
PFDN4-201ENST00000371419 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.4■■□□□ 1.66
PFDN4-201ENST00000371419 HNRNPUL2Q1KMD3 747 aaKnown RBP25.4■■□□□ 1.66
PFDN4-201ENST00000371419 PCF11O94913 1555 aaKnown RBP25.39■■□□□ 1.66
PFDN4-201ENST00000371419 ABCC10Q5T3U5 1492 aa25.39■■□□□ 1.66
PFDN4-201ENST00000371419 WDR7Q9Y4E6 1490 aa25.37■■□□□ 1.65
PFDN4-201ENST00000371419 FYCO1Q9BQS8 1478 aa25.37■■□□□ 1.65
PFDN4-201ENST00000371419 EPRSP07814 1512 aaKnown RBP25.36■■□□□ 1.65
PFDN4-201ENST00000371419 DIP2BQ9P265 1576 aa25.35■■□□□ 1.65
PFDN4-201ENST00000371419 FAM69CQ0P6D2 419 aa25.34■■□□□ 1.65
PFDN4-201ENST00000371419 CDK13Q14004 1512 aaKnown RBP25.34■■□□□ 1.65
PFDN4-201ENST00000371419 KIF13AQ9H1H9 1805 aa25.32■■□□□ 1.64
PFDN4-201ENST00000371419 PLEKHD1A6NEE1 506 aa25.3■■□□□ 1.64
PFDN4-201ENST00000371419 VPS8Q8N3P4 1428 aa25.3■■□□□ 1.64
PFDN4-201ENST00000371419 CCDC18Q5T9S5 1454 aa25.29■■□□□ 1.64
PFDN4-201ENST00000371419 KCNH8Q96L42 1107 aa25.28■■□□□ 1.64
PFDN4-201ENST00000371419 LRRIQ1Q96JM4 1722 aa25.28■■□□□ 1.64
PFDN4-201ENST00000371419 GLI2P10070 1586 aa25.27■■□□□ 1.64
PFDN4-201ENST00000371419 CDK11AQ9UQ88 783 aaPredicted RBP25.27■■□□□ 1.64
PFDN4-201ENST00000371419 TROQ12816 1431 aaPredicted RBP25.16■■□□□ 1.62
PFDN4-201ENST00000371419 MAP3K4Q9Y6R4 1608 aa25.15■■□□□ 1.62
PFDN4-201ENST00000371419 CFAP43Q8NDM7 1665 aa25.13■■□□□ 1.61
PFDN4-201ENST00000371419 ABCA9Q8IUA7 1624 aa25.12■■□□□ 1.61
PFDN4-201ENST00000371419 CD109Q6YHK3 1445 aa25.12■■□□□ 1.61
PFDN4-201ENST00000371419 TSPOAP1O95153 1857 aa25.11■■□□□ 1.61
PFDN4-201ENST00000371419 MAGI3Q5TCQ9 1506 aa25.1■■□□□ 1.61
PFDN4-201ENST00000371419 KIF14Q15058 1648 aa25.07■■□□□ 1.6
PFDN4-201ENST00000371419 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.07■■□□□ 1.6
PFDN4-201ENST00000371419 TIAM1Q13009 1591 aa25.07■■□□□ 1.6
PFDN4-201ENST00000371419 MTUS2Q5JR59 1369 aa25.06■■□□□ 1.6
PFDN4-201ENST00000371419 PPRC1Q5VV67 1664 aaKnown RBP25.05■■□□□ 1.6
PFDN4-201ENST00000371419 MAP3K1Q13233 1512 aa25.05■■□□□ 1.6
PFDN4-201ENST00000371419 TEX14Q8IWB6 1497 aa25.04■■□□□ 1.6
PFDN4-201ENST00000371419 APLP2Q06481 763 aa25.03■■□□□ 1.6
PFDN4-201ENST00000371419 TTC37Q6PGP7 1564 aa25.03■■□□□ 1.6
PFDN4-201ENST00000371419 EHBP1L1Q8N3D4 1523 aa25.01■■□□□ 1.59
PFDN4-201ENST00000371419 LRRC9Q6ZRR7 1453 aa24.96■■□□□ 1.59
PFDN4-201ENST00000371419 PLCH2O75038 1416 aa24.94■■□□□ 1.58
PFDN4-201ENST00000371419 KANK4Q5T7N3 995 aaPredicted RBP24.93■■□□□ 1.58
PFDN4-201ENST00000371419 MYO5CQ9NQX4 1742 aa24.92■■□□□ 1.58
PFDN4-201ENST00000371419 ARAP3Q8WWN8 1544 aa24.9■■□□□ 1.58
PFDN4-201ENST00000371419 NEO1Q92859 1461 aa24.9■■□□□ 1.58
PFDN4-201ENST00000371419 PHLDB1Q86UU1 1377 aa24.9■■□□□ 1.58
PFDN4-201ENST00000371419 FANCAO15360 1455 aa24.89■■□□□ 1.57
PFDN4-201ENST00000371419 SUPT6HQ7KZ85 1726 aaKnown RBP24.89■■□□□ 1.57
PFDN4-201ENST00000371419 KDM6BO15054 1643 aa24.88■■□□□ 1.57
PFDN4-201ENST00000371419 CCNB3Q8WWL7 1395 aa24.87■■□□□ 1.57
PFDN4-201ENST00000371419 CFAP74Q9C0B2 1584 aa24.87■■□□□ 1.57
PFDN4-201ENST00000371419 EFCAB2Q5VUJ9 269 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms