RNA–Protein interactions for RNA: ENST00000371219.2

RBM38-204, Transcript of RNA binding motif protein 38, humanhuman

TSL 2 BASIC

Gene RBM38, Length 760 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-204ENST00000371219 KIAA0586Q9BVV6 1533 aa24.51■■□□□ 1.51
RBM38-204ENST00000371219 IQGAP2Q13576 1575 aa24.46■■□□□ 1.51
RBM38-204ENST00000371219 ARHGEF11O15085 1522 aa24.44■■□□□ 1.5
RBM38-204ENST00000371219 RIMBP3CA6NJZ7 1639 aa24.42■■□□□ 1.5
RBM38-204ENST00000371219 RIMBP3BA6NNM3 1639 aa24.42■■□□□ 1.5
RBM38-204ENST00000371219 RIMBP3Q9UFD9 1639 aa24.42■■□□□ 1.5
RBM38-204ENST00000371219 GOLGA3Q08378 1498 aa24.36■■□□□ 1.49
RBM38-204ENST00000371219 FAM9AQ8IZU1 332 aaPredicted RBP24.34■■□□□ 1.49
RBM38-204ENST00000371219 UGGT2Q9NYU1 1516 aa24.33■■□□□ 1.49
RBM38-204ENST00000371219 JPH4Q96JJ6 628 aa24.28■■□□□ 1.48
RBM38-204ENST00000371219 PRG4Q92954 1404 aaPredicted RBP24.27■■□□□ 1.48
RBM38-204ENST00000371219 ERCC6L2Q5T890 1561 aa24.24■■□□□ 1.47
RBM38-204ENST00000371219 CARMIL2Q6F5E8 1435 aa24.23■■□□□ 1.47
RBM38-204ENST00000371219 ARAP1Q96P48 1450 aa24.23■■□□□ 1.47
RBM38-204ENST00000371219 KIAA0556O60303 1618 aa24.21■■□□□ 1.47
RBM38-204ENST00000371219 DISP1Q96F81 1524 aa24.19■■□□□ 1.46
RBM38-204ENST00000371219 SAMD9Q5K651 1589 aa24.18■■□□□ 1.46
RBM38-204ENST00000371219 EFCAB5A4FU69 1503 aa24.16■■□□□ 1.46
RBM38-204ENST00000371219 TNIKQ9UKE5 1360 aa24.09■■□□□ 1.45
RBM38-204ENST00000371219 UBTFP17480 764 aaKnown RBP24.07■■□□□ 1.44
RBM38-204ENST00000371219 PTPRGP23470 1445 aa24.01■■□□□ 1.43
RBM38-204ENST00000371219 CYB5RLQ6IPT4 315 aa23.99■■□□□ 1.43
RBM38-204ENST00000371219 ADCY10Q96PN6 1610 aa23.96■■□□□ 1.43
RBM38-204ENST00000371219 UHRF1BP1LA0JNW5 1464 aa23.95■■□□□ 1.42
RBM38-204ENST00000371219 AEBP2Q6ZN18 517 aaPredicted RBP23.95■■□□□ 1.42
RBM38-204ENST00000371219 ABCC2Q92887 1545 aa23.94■■□□□ 1.42
RBM38-204ENST00000371219 ARHGAP35Q9NRY4 1499 aa23.93■■□□□ 1.42
RBM38-204ENST00000371219 ABCA8O94911 1581 aa23.91■■□□□ 1.42
RBM38-204ENST00000371219 UACAQ9BZF9 1416 aa23.91■■□□□ 1.42
RBM38-204ENST00000371219 EHMT2Q96KQ7 1210 aa23.89■■□□□ 1.41
RBM38-204ENST00000371219 FHOD3Q2V2M9 1422 aa23.87■■□□□ 1.41
RBM38-204ENST00000371219 RAPGEF6Q8TEU7 1601 aa23.87■■□□□ 1.41
RBM38-204ENST00000371219 CLIP1P30622 1438 aa23.86■■□□□ 1.41
RBM38-204ENST00000371219 FMN1Q68DA7 1419 aa23.85■■□□□ 1.41
RBM38-204ENST00000371219 CEP162Q5TB80 1403 aa23.84■■□□□ 1.41
RBM38-204ENST00000371219 PLB1Q6P1J6 1458 aa23.82■■□□□ 1.4
RBM38-204ENST00000371219 MAPKBP1O60336 1514 aa23.82■■□□□ 1.4
RBM38-204ENST00000371219 KDM5BQ9UGL1 1544 aa23.82■■□□□ 1.4
RBM38-204ENST00000371219 ZCCHC11Q5TAX3 1644 aaKnown RBP23.78■■□□□ 1.4
RBM38-204ENST00000371219 RANGAP1P46060 587 aaPredicted RBP23.77■■□□□ 1.4
RBM38-204ENST00000371219 P3H3Q8IVL6 736 aa23.76■■□□□ 1.39
RBM38-204ENST00000371219 HECW1Q76N89 1606 aa23.76■■□□□ 1.39
RBM38-204ENST00000371219 LOC105371045A0A1W2PR82 267 aa23.73■■□□□ 1.39
RBM38-204ENST00000371219 TTBK1Q5TCY1 1321 aaPredicted RBP23.72■■□□□ 1.39
RBM38-204ENST00000371219 NUP153P49790 1475 aaKnown RBP23.71■■□□□ 1.39
RBM38-204ENST00000371219 NPM1P06748 294 aaKnown RBP eCLIP23.71■■□□□ 1.39
RBM38-204ENST00000371219 FYCO1Q9BQS8 1478 aa23.69■■□□□ 1.38
RBM38-204ENST00000371219 PCF11O94913 1555 aaKnown RBP23.69■■□□□ 1.38
RBM38-204ENST00000371219 CASKIN1Q8WXD9 1431 aa23.67■■□□□ 1.38
RBM38-204ENST00000371219 ATP10BO94823 1461 aa23.62■■□□□ 1.37
RBM38-204ENST00000371219 CCDC18Q5T9S5 1454 aa23.62■■□□□ 1.37
RBM38-204ENST00000371219 KIF13AQ9H1H9 1805 aa23.62■■□□□ 1.37
RBM38-204ENST00000371219 LRRIQ1Q96JM4 1722 aa23.62■■□□□ 1.37
RBM38-204ENST00000371219 ASXL2Q76L83 1435 aa23.61■■□□□ 1.37
RBM38-204ENST00000371219 DIP2BQ9P265 1576 aa23.61■■□□□ 1.37
RBM38-204ENST00000371219 WDR7Q9Y4E6 1490 aa23.6■■□□□ 1.37
RBM38-204ENST00000371219 EPRSP07814 1512 aaKnown RBP23.59■■□□□ 1.37
RBM38-204ENST00000371219 ABCC10Q5T3U5 1492 aa23.58■■□□□ 1.37
RBM38-204ENST00000371219 VPS8Q8N3P4 1428 aa23.57■■□□□ 1.36
RBM38-204ENST00000371219 GLI2P10070 1586 aa23.57■■□□□ 1.36
RBM38-204ENST00000371219 CDK13Q14004 1512 aaKnown RBP23.53■■□□□ 1.36
RBM38-204ENST00000371219 CFAP43Q8NDM7 1665 aa23.51■■□□□ 1.35
RBM38-204ENST00000371219 MAP3K4Q9Y6R4 1608 aa23.47■■□□□ 1.35
RBM38-204ENST00000371219 ABCA9Q8IUA7 1624 aa23.45■■□□□ 1.34
RBM38-204ENST00000371219 CDK11AQ9UQ88 783 aaPredicted RBP23.44■■□□□ 1.34
RBM38-204ENST00000371219 MAP3K1Q13233 1512 aa23.43■■□□□ 1.34
RBM38-204ENST00000371219 KIF14Q15058 1648 aa23.42■■□□□ 1.34
RBM38-204ENST00000371219 TROQ12816 1431 aaPredicted RBP23.41■■□□□ 1.34
RBM38-204ENST00000371219 TIAM1Q13009 1591 aa23.4■■□□□ 1.34
RBM38-204ENST00000371219 PLEKHD1A6NEE1 506 aa23.39■■□□□ 1.33
RBM38-204ENST00000371219 ARID3CA6NKF2 412 aa23.39■■□□□ 1.33
RBM38-204ENST00000371219 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.39■■□□□ 1.33
RBM38-204ENST00000371219 TRHP20396 242 aaPredicted RBP23.39■■□□□ 1.33
RBM38-204ENST00000371219 HNRNPUL2Q1KMD3 747 aaKnown RBP23.39■■□□□ 1.33
RBM38-204ENST00000371219 ATP1B4Q9UN42 357 aaPredicted RBP23.38■■□□□ 1.33
RBM38-204ENST00000371219 EHBP1L1Q8N3D4 1523 aa23.37■■□□□ 1.33
RBM38-204ENST00000371219 PPRC1Q5VV67 1664 aaKnown RBP23.36■■□□□ 1.33
RBM38-204ENST00000371219 FAM69CQ0P6D2 419 aa23.36■■□□□ 1.33
RBM38-204ENST00000371219 TSPOAP1O95153 1857 aa23.34■■□□□ 1.33
RBM38-204ENST00000371219 MAGI3Q5TCQ9 1506 aa23.33■■□□□ 1.33
RBM38-204ENST00000371219 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.33■■□□□ 1.324e-6■□□□□ 11.3
RBM38-204ENST00000371219 TTC37Q6PGP7 1564 aa23.32■■□□□ 1.32
RBM38-204ENST00000371219 TEX14Q8IWB6 1497 aa23.32■■□□□ 1.32
RBM38-204ENST00000371219 MYO5CQ9NQX4 1742 aa23.32■■□□□ 1.32
RBM38-204ENST00000371219 ARAP3Q8WWN8 1544 aa23.3■■□□□ 1.32
RBM38-204ENST00000371219 CFAP74Q9C0B2 1584 aa23.29■■□□□ 1.32
RBM38-204ENST00000371219 CD109Q6YHK3 1445 aa23.28■■□□□ 1.32
RBM38-204ENST00000371219 SUPT6HQ7KZ85 1726 aaKnown RBP23.27■■□□□ 1.32
RBM38-204ENST00000371219 MTUS2Q5JR59 1369 aa23.27■■□□□ 1.31
RBM38-204ENST00000371219 KCNH8Q96L42 1107 aa23.25■■□□□ 1.31
RBM38-204ENST00000371219 PREX2Q70Z35 1606 aa23.24■■□□□ 1.31
RBM38-204ENST00000371219 LRRC9Q6ZRR7 1453 aa23.24■■□□□ 1.31
RBM38-204ENST00000371219 CDC42BPAQ5VT25 1732 aa23.22■■□□□ 1.31
RBM38-204ENST00000371219 ITSN2Q9NZM3 1697 aa23.22■■□□□ 1.31
RBM38-204ENST00000371219 NEO1Q92859 1461 aa23.2■■□□□ 1.3
RBM38-204ENST00000371219 PHLDB1Q86UU1 1377 aa23.19■■□□□ 1.3
RBM38-204ENST00000371219 APLP2Q06481 763 aa23.18■■□□□ 1.3
RBM38-204ENST00000371219 CDC42BPBQ9Y5S2 1711 aa23.18■■□□□ 1.3
RBM38-204ENST00000371219 PLCH2O75038 1416 aa23.16■■□□□ 1.3
RBM38-204ENST00000371219 KDM6BO15054 1643 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms