RNA–Protein interactions for RNA: ENST00000370677.4

LAMA5-202, Transcript of laminin subunit alpha 5, humanhuman

TSL 2

Gene LAMA5, Length 1,674 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5-202ENST00000370677 CHD1O14646 1710 aa31.77■■■□□ 2.68
LAMA5-202ENST00000370677 FBLN2P98095 1184 aa31.75■■■□□ 2.67
LAMA5-202ENST00000370677 NUP160Q12769 1436 aa31.73■■■□□ 2.67
LAMA5-202ENST00000370677 CEP170Q5SW79 1584 aa31.73■■■□□ 2.67
LAMA5-202ENST00000370677 IQGAP2Q13576 1575 aa31.72■■■□□ 2.67
LAMA5-202ENST00000370677 KIAA0586Q9BVV6 1533 aa31.71■■■□□ 2.67
LAMA5-202ENST00000370677 RANGAP1P46060 587 aaPredicted RBP31.66■■■□□ 2.66
LAMA5-202ENST00000370677 ARHGAP35Q9NRY4 1499 aa31.65■■■□□ 2.66
LAMA5-202ENST00000370677 EFCAB5A4FU69 1503 aa31.64■■■□□ 2.66
LAMA5-202ENST00000370677 SAMD9Q5K651 1589 aa31.58■■■□□ 2.65
LAMA5-202ENST00000370677 UGGT2Q9NYU1 1516 aa31.57■■■□□ 2.64
LAMA5-202ENST00000370677 ARAP1Q96P48 1450 aa31.57■■■□□ 2.64
LAMA5-202ENST00000370677 VPS8Q8N3P4 1428 aa31.5■■■□□ 2.63
LAMA5-202ENST00000370677 OSCARQ8IYS5 282 aa31.46■■■□□ 2.63
LAMA5-202ENST00000370677 CLASP1Q7Z460 1538 aa31.44■■■□□ 2.62
LAMA5-202ENST00000370677 FHOD3Q2V2M9 1422 aa31.41■■■□□ 2.62
LAMA5-202ENST00000370677 KIAA0556O60303 1618 aa31.4■■■□□ 2.62
LAMA5-202ENST00000370677 DISP1Q96F81 1524 aa31.4■■■□□ 2.62
LAMA5-202ENST00000370677 SHROOM2Q13796 1616 aa31.39■■■□□ 2.62
LAMA5-202ENST00000370677 JPH4Q96JJ6 628 aa31.38■■■□□ 2.61
LAMA5-202ENST00000370677 P3H3Q8IVL6 736 aa31.37■■■□□ 2.61
LAMA5-202ENST00000370677 FMN1Q68DA7 1419 aa31.32■■■□□ 2.6
LAMA5-202ENST00000370677 CARMIL2Q6F5E8 1435 aa31.31■■■□□ 2.6
LAMA5-202ENST00000370677 PRG4Q92954 1404 aaPredicted RBP31.25■■■□□ 2.59
LAMA5-202ENST00000370677 PCF11O94913 1555 aaKnown RBP31.22■■■□□ 2.59
LAMA5-202ENST00000370677 FYCO1Q9BQS8 1478 aa31.19■■■□□ 2.58
LAMA5-202ENST00000370677 CASKIN1Q8WXD9 1431 aa31.19■■■□□ 2.58
LAMA5-202ENST00000370677 ERCC6L2Q5T890 1561 aa31.12■■■□□ 2.57
LAMA5-202ENST00000370677 APLP2Q06481 763 aa31.1■■■□□ 2.57
LAMA5-202ENST00000370677 MAP3K1Q13233 1512 aa31.09■■■□□ 2.57
LAMA5-202ENST00000370677 HECW1Q76N89 1606 aa31.06■■■□□ 2.56
LAMA5-202ENST00000370677 RAPGEF6Q8TEU7 1601 aa31.04■■■□□ 2.56
LAMA5-202ENST00000370677 CFAP43Q8NDM7 1665 aa31.03■■■□□ 2.56
LAMA5-202ENST00000370677 TIAM1Q13009 1591 aa31.03■■■□□ 2.56
LAMA5-202ENST00000370677 ARHGEF11O15085 1522 aa31.01■■■□□ 2.56
LAMA5-202ENST00000370677 PTPRGP23470 1445 aa31.01■■■□□ 2.55
LAMA5-202ENST00000370677 LRRIQ1Q96JM4 1722 aa31.01■■■□□ 2.55
LAMA5-202ENST00000370677 ABCA8O94911 1581 aa30.98■■■□□ 2.55
LAMA5-202ENST00000370677 TTBK1Q5TCY1 1321 aaPredicted RBP30.98■■■□□ 2.55
LAMA5-202ENST00000370677 ATP1B4Q9UN42 357 aaPredicted RBP30.97■■■□□ 2.55
LAMA5-202ENST00000370677 PLB1Q6P1J6 1458 aa30.96■■■□□ 2.55
LAMA5-202ENST00000370677 CCDC18Q5T9S5 1454 aa30.96■■■□□ 2.55
LAMA5-202ENST00000370677 PPARGC1BQ86YN6 1023 aaKnown RBP30.93■■■□□ 2.54
LAMA5-202ENST00000370677 DNAJC5Q9H3Z4 198 aa30.93■■■□□ 2.54
LAMA5-202ENST00000370677 RIMBP3CA6NJZ7 1639 aa30.93■■■□□ 2.54
LAMA5-202ENST00000370677 RIMBP3BA6NNM3 1639 aa30.93■■■□□ 2.54
LAMA5-202ENST00000370677 RIMBP3Q9UFD9 1639 aa30.93■■■□□ 2.54
LAMA5-202ENST00000370677 NUP153P49790 1475 aaKnown RBP30.93■■■□□ 2.54
LAMA5-202ENST00000370677 EPRSP07814 1512 aaKnown RBP30.92■■■□□ 2.54
LAMA5-202ENST00000370677 LRRC9Q6ZRR7 1453 aa30.87■■■□□ 2.53
LAMA5-202ENST00000370677 KANK4Q5T7N3 995 aaPredicted RBP30.86■■■□□ 2.53
LAMA5-202ENST00000370677 UACAQ9BZF9 1416 aa30.85■■■□□ 2.53
LAMA5-202ENST00000370677 CDK13Q14004 1512 aaKnown RBP30.82■■■□□ 2.52
LAMA5-202ENST00000370677 ABCC2Q92887 1545 aa30.8■■■□□ 2.52
LAMA5-202ENST00000370677 UHRF1BP1LA0JNW5 1464 aa30.77■■■□□ 2.52
LAMA5-202ENST00000370677 EHBP1L1Q8N3D4 1523 aa30.74■■■□□ 2.51
LAMA5-202ENST00000370677 MAGI3Q5TCQ9 1506 aa30.72■■■□□ 2.51
LAMA5-202ENST00000370677 MTUS2Q5JR59 1369 aa30.72■■■□□ 2.51
LAMA5-202ENST00000370677 ATP10BO94823 1461 aa30.71■■■□□ 2.51
LAMA5-202ENST00000370677 TRIM26Q12899 539 aaPredicted RBP30.71■■■□□ 2.51
LAMA5-202ENST00000370677 ARID3CA6NKF2 412 aa30.7■■■□□ 2.5
LAMA5-202ENST00000370677 CDK11AQ9UQ88 783 aaPredicted RBP30.66■■■□□ 2.5
LAMA5-202ENST00000370677 ADCY10Q96PN6 1610 aa30.66■■■□□ 2.5
LAMA5-202ENST00000370677 CYB5RLQ6IPT4 315 aa30.65■■■□□ 2.5
LAMA5-202ENST00000370677 SUPT6HQ7KZ85 1726 aaKnown RBP30.64■■■□□ 2.5
LAMA5-202ENST00000370677 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.64■■■□□ 2.5
LAMA5-202ENST00000370677 HNRNPUL2Q1KMD3 747 aaKnown RBP30.64■■■□□ 2.5
LAMA5-202ENST00000370677 KDM5BQ9UGL1 1544 aa30.63■■■□□ 2.49
LAMA5-202ENST00000370677 ZCCHC11Q5TAX3 1644 aaKnown RBP30.59■■■□□ 2.49
LAMA5-202ENST00000370677 TROQ12816 1431 aaPredicted RBP30.59■■■□□ 2.49
LAMA5-202ENST00000370677 PCGF6Q9BYE7 350 aa30.58■■■□□ 2.49
LAMA5-202ENST00000370677 NCOA2Q15596 1464 aa30.56■■■□□ 2.48
LAMA5-202ENST00000370677 PLEKHD1A6NEE1 506 aa30.52■■■□□ 2.48
LAMA5-202ENST00000370677 PHLDB1Q86UU1 1377 aa30.52■■■□□ 2.48
LAMA5-202ENST00000370677 RRBP1Q9P2E9 1410 aaKnown RBP30.49■■■□□ 2.47
LAMA5-202ENST00000370677 KIF14Q15058 1648 aa30.46■■■□□ 2.47
LAMA5-202ENST00000370677 MYOM3Q5VTT5 1437 aa30.42■■■□□ 2.46
LAMA5-202ENST00000370677 CCNB3Q8WWL7 1395 aa30.39■■■□□ 2.46
LAMA5-202ENST00000370677 FGD6Q6ZV73 1430 aa30.37■■■□□ 2.45
LAMA5-202ENST00000370677 NPM1P06748 294 aaKnown RBP eCLIP30.36■■■□□ 2.45
LAMA5-202ENST00000370677 ABCC10Q5T3U5 1492 aa30.35■■■□□ 2.45
LAMA5-202ENST00000370677 WDR7Q9Y4E6 1490 aa30.34■■■□□ 2.45
LAMA5-202ENST00000370677 ITSN2Q9NZM3 1697 aa30.34■■■□□ 2.45
LAMA5-202ENST00000370677 MIA2Q96PC5 1412 aa30.31■■■□□ 2.44
LAMA5-202ENST00000370677 ASXL2Q76L83 1435 aa30.3■■■□□ 2.44
LAMA5-202ENST00000370677 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.29■■■□□ 2.448e-7■■■■■ 27.2
LAMA5-202ENST00000370677 GPATCH8Q9UKJ3 1502 aaKnown RBP30.28■■■□□ 2.44
LAMA5-202ENST00000370677 CDC42BPAQ5VT25 1732 aa30.27■■■□□ 2.44
LAMA5-202ENST00000370677 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.27■■■□□ 2.442e-6■■■■■ 46.2
LAMA5-202ENST00000370677 PTPN23Q9H3S7 1636 aa30.27■■■□□ 2.44
LAMA5-202ENST00000370677 TTC37Q6PGP7 1564 aa30.25■■■□□ 2.43
LAMA5-202ENST00000370677 TCOF1Q13428 1488 aaKnown RBP30.24■■■□□ 2.43
LAMA5-202ENST00000370677 MAPKBP1O60336 1514 aa30.24■■■□□ 2.43
LAMA5-202ENST00000370677 PREX2Q70Z35 1606 aa30.2■■■□□ 2.43
LAMA5-202ENST00000370677 KCNH8Q96L42 1107 aa30.2■■■□□ 2.42
LAMA5-202ENST00000370677 MYO5CQ9NQX4 1742 aa30.18■■■□□ 2.42
LAMA5-202ENST00000370677 FAM50AQ14320 339 aaKnown RBP30.18■■■□□ 2.42
LAMA5-202ENST00000370677 ABCA9Q8IUA7 1624 aa30.16■■■□□ 2.42
LAMA5-202ENST00000370677 CDC42BPBQ9Y5S2 1711 aa30.16■■■□□ 2.42
LAMA5-202ENST00000370677 CFDP1Q9UEE9 299 aaPredicted RBP30.15■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms