RNA–Protein interactions for RNA: ENST00000370341.3

LINC00029-201, long intergenic non-protein coding RNA 29, humanhuman

TSL 1 (best) BASIC

Gene LINC00029, Length 1,631 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00029-201ENST00000370341 RANGAP1P46060 587 aaPredicted RBP27.39■■□□□ 1.98
LINC00029-201ENST00000370341 CHD1O14646 1710 aa27.37■■□□□ 1.97
LINC00029-201ENST00000370341 CLIP1P30622 1438 aa27.37■■□□□ 1.97
LINC00029-201ENST00000370341 DNAJC5Q9H3Z4 198 aa27.33■■□□□ 1.97
LINC00029-201ENST00000370341 CEP170Q5SW79 1584 aa27.27■■□□□ 1.96
LINC00029-201ENST00000370341 NUP160Q12769 1436 aa27.27■■□□□ 1.96
LINC00029-201ENST00000370341 KIAA0586Q9BVV6 1533 aa27.27■■□□□ 1.96
LINC00029-201ENST00000370341 IQGAP2Q13576 1575 aa27.25■■□□□ 1.95
LINC00029-201ENST00000370341 ARHGAP35Q9NRY4 1499 aa27.2■■□□□ 1.95
LINC00029-201ENST00000370341 OSCARQ8IYS5 282 aa27.19■■□□□ 1.94
LINC00029-201ENST00000370341 EFCAB5A4FU69 1503 aa27.17■■□□□ 1.94
LINC00029-201ENST00000370341 ARAP1Q96P48 1450 aa27.12■■□□□ 1.93
LINC00029-201ENST00000370341 UGGT2Q9NYU1 1516 aa27.12■■□□□ 1.93
LINC00029-201ENST00000370341 P3H3Q8IVL6 736 aa27.1■■□□□ 1.93
LINC00029-201ENST00000370341 SAMD9Q5K651 1589 aa27.1■■□□□ 1.93
LINC00029-201ENST00000370341 CLASP1Q7Z460 1538 aa27.08■■□□□ 1.93
LINC00029-201ENST00000370341 JPH4Q96JJ6 628 aa27.08■■□□□ 1.93
LINC00029-201ENST00000370341 VPS8Q8N3P4 1428 aa27.07■■□□□ 1.92
LINC00029-201ENST00000370341 FHOD3Q2V2M9 1422 aa27.04■■□□□ 1.92
LINC00029-201ENST00000370341 DISP1Q96F81 1524 aa26.99■■□□□ 1.91
LINC00029-201ENST00000370341 KIAA0556O60303 1618 aa26.98■■□□□ 1.91
LINC00029-201ENST00000370341 CARMIL2Q6F5E8 1435 aa26.97■■□□□ 1.91
LINC00029-201ENST00000370341 SHROOM2Q13796 1616 aa26.94■■□□□ 1.9
LINC00029-201ENST00000370341 FMN1Q68DA7 1419 aa26.94■■□□□ 1.9
LINC00029-201ENST00000370341 PRG4Q92954 1404 aaPredicted RBP26.92■■□□□ 1.9
LINC00029-201ENST00000370341 APLP2Q06481 763 aa26.86■■□□□ 1.89
LINC00029-201ENST00000370341 TTBK1Q5TCY1 1321 aaPredicted RBP26.83■■□□□ 1.88
LINC00029-201ENST00000370341 CASKIN1Q8WXD9 1431 aa26.82■■□□□ 1.88
LINC00029-201ENST00000370341 PCF11O94913 1555 aaKnown RBP26.82■■□□□ 1.88
LINC00029-201ENST00000370341 ERCC6L2Q5T890 1561 aa26.81■■□□□ 1.88
LINC00029-201ENST00000370341 FYCO1Q9BQS8 1478 aa26.8■■□□□ 1.88
LINC00029-201ENST00000370341 ATP1B4Q9UN42 357 aaPredicted RBP26.79■■□□□ 1.88
LINC00029-201ENST00000370341 ARHGEF11O15085 1522 aa26.74■■□□□ 1.87
LINC00029-201ENST00000370341 PTPRGP23470 1445 aa26.73■■□□□ 1.87
LINC00029-201ENST00000370341 PPARGC1BQ86YN6 1023 aaKnown RBP26.72■■□□□ 1.87
LINC00029-201ENST00000370341 RIMBP3CA6NJZ7 1639 aa26.69■■□□□ 1.86
LINC00029-201ENST00000370341 RIMBP3BA6NNM3 1639 aa26.69■■□□□ 1.86
LINC00029-201ENST00000370341 HECW1Q76N89 1606 aa26.69■■□□□ 1.86
LINC00029-201ENST00000370341 RIMBP3Q9UFD9 1639 aa26.69■■□□□ 1.86
LINC00029-201ENST00000370341 RAPGEF6Q8TEU7 1601 aa26.67■■□□□ 1.86
LINC00029-201ENST00000370341 MAP3K1Q13233 1512 aa26.67■■□□□ 1.86
LINC00029-201ENST00000370341 PLB1Q6P1J6 1458 aa26.65■■□□□ 1.86
LINC00029-201ENST00000370341 TIAM1Q13009 1591 aa26.65■■□□□ 1.86
LINC00029-201ENST00000370341 ABCA8O94911 1581 aa26.61■■□□□ 1.85
LINC00029-201ENST00000370341 CFAP43Q8NDM7 1665 aa26.61■■□□□ 1.85
LINC00029-201ENST00000370341 CCDC18Q5T9S5 1454 aa26.61■■□□□ 1.85
LINC00029-201ENST00000370341 LRRIQ1Q96JM4 1722 aa26.6■■□□□ 1.85
LINC00029-201ENST00000370341 EPRSP07814 1512 aaKnown RBP26.58■■□□□ 1.85
LINC00029-201ENST00000370341 NUP153P49790 1475 aaKnown RBP26.58■■□□□ 1.85
LINC00029-201ENST00000370341 KANK4Q5T7N3 995 aaPredicted RBP26.57■■□□□ 1.84
LINC00029-201ENST00000370341 UACAQ9BZF9 1416 aa26.56■■□□□ 1.84
LINC00029-201ENST00000370341 ARID3CA6NKF2 412 aa26.54■■□□□ 1.84
LINC00029-201ENST00000370341 LRRC9Q6ZRR7 1453 aa26.54■■□□□ 1.84
LINC00029-201ENST00000370341 CDK13Q14004 1512 aaKnown RBP26.52■■□□□ 1.84
LINC00029-201ENST00000370341 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.5■■□□□ 1.83
LINC00029-201ENST00000370341 HNRNPUL2Q1KMD3 747 aaKnown RBP26.5■■□□□ 1.83
LINC00029-201ENST00000370341 CYB5RLQ6IPT4 315 aa26.5■■□□□ 1.83
LINC00029-201ENST00000370341 ABCC2Q92887 1545 aa26.48■■□□□ 1.83
LINC00029-201ENST00000370341 MTUS2Q5JR59 1369 aa26.48■■□□□ 1.83
LINC00029-201ENST00000370341 UHRF1BP1LA0JNW5 1464 aa26.45■■□□□ 1.82
LINC00029-201ENST00000370341 TRIM26Q12899 539 aaPredicted RBP26.45■■□□□ 1.82
LINC00029-201ENST00000370341 CDK11AQ9UQ88 783 aaPredicted RBP26.45■■□□□ 1.82
LINC00029-201ENST00000370341 ATP10BO94823 1461 aa26.44■■□□□ 1.82
LINC00029-201ENST00000370341 EHBP1L1Q8N3D4 1523 aa26.41■■□□□ 1.82
LINC00029-201ENST00000370341 MAGI3Q5TCQ9 1506 aa26.38■■□□□ 1.81
LINC00029-201ENST00000370341 ADCY10Q96PN6 1610 aa26.37■■□□□ 1.81
LINC00029-201ENST00000370341 PLEKHD1A6NEE1 506 aa26.34■■□□□ 1.81
LINC00029-201ENST00000370341 SUPT6HQ7KZ85 1726 aaKnown RBP26.33■■□□□ 1.81
LINC00029-201ENST00000370341 KDM5BQ9UGL1 1544 aa26.32■■□□□ 1.8
LINC00029-201ENST00000370341 TROQ12816 1431 aaPredicted RBP26.31■■□□□ 1.8
LINC00029-201ENST00000370341 PCGF6Q9BYE7 350 aa26.3■■□□□ 1.8
LINC00029-201ENST00000370341 ZCCHC11Q5TAX3 1644 aaKnown RBP26.3■■□□□ 1.8
LINC00029-201ENST00000370341 NCOA2Q15596 1464 aa26.28■■□□□ 1.8
LINC00029-201ENST00000370341 PHLDB1Q86UU1 1377 aa26.25■■□□□ 1.79
LINC00029-201ENST00000370341 NPM1P06748 294 aaKnown RBP eCLIP26.24■■□□□ 1.79
LINC00029-201ENST00000370341 KIF14Q15058 1648 aa26.18■■□□□ 1.78
LINC00029-201ENST00000370341 RRBP1Q9P2E9 1410 aaKnown RBP26.18■■□□□ 1.78
LINC00029-201ENST00000370341 MYOM3Q5VTT5 1437 aa26.16■■□□□ 1.78
LINC00029-201ENST00000370341 CCNB3Q8WWL7 1395 aa26.15■■□□□ 1.78
LINC00029-201ENST00000370341 FGD6Q6ZV73 1430 aa26.12■■□□□ 1.77
LINC00029-201ENST00000370341 KCNH8Q96L42 1107 aa26.1■■□□□ 1.77
LINC00029-201ENST00000370341 WDR7Q9Y4E6 1490 aa26.1■■□□□ 1.77
LINC00029-201ENST00000370341 ASXL2Q76L83 1435 aa26.09■■□□□ 1.77
LINC00029-201ENST00000370341 ABCC10Q5T3U5 1492 aa26.08■■□□□ 1.77
LINC00029-201ENST00000370341 FAM50AQ14320 339 aaKnown RBP26.06■■□□□ 1.76
LINC00029-201ENST00000370341 MAPKBP1O60336 1514 aa26.06■■□□□ 1.76
LINC00029-201ENST00000370341 MIA2Q96PC5 1412 aa26.05■■□□□ 1.76
LINC00029-201ENST00000370341 ITSN2Q9NZM3 1697 aa26.05■■□□□ 1.76
LINC00029-201ENST00000370341 GPATCH8Q9UKJ3 1502 aaKnown RBP26.04■■□□□ 1.76
LINC00029-201ENST00000370341 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.03■■□□□ 1.76
LINC00029-201ENST00000370341 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.02■■□□□ 1.76
LINC00029-201ENST00000370341 PTPN23Q9H3S7 1636 aa26.01■■□□□ 1.75
LINC00029-201ENST00000370341 CFDP1Q9UEE9 299 aaPredicted RBP26.01■■□□□ 1.75
LINC00029-201ENST00000370341 CDC42BPAQ5VT25 1732 aa25.99■■□□□ 1.75
LINC00029-201ENST00000370341 TTC37Q6PGP7 1564 aa25.99■■□□□ 1.75
LINC00029-201ENST00000370341 TCOF1Q13428 1488 aaKnown RBP25.97■■□□□ 1.75
LINC00029-201ENST00000370341 ITGAEP38570 1179 aa25.94■■□□□ 1.74
LINC00029-201ENST00000370341 MYO5CQ9NQX4 1742 aa25.93■■□□□ 1.74
LINC00029-201ENST00000370341 PREX2Q70Z35 1606 aa25.93■■□□□ 1.74
LINC00029-201ENST00000370341 ZNF777Q9ULD5 760 aaPredicted RBP25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms