RNA–Protein interactions for RNA: ENST00000369220.8

CCNC-203, Transcript of cyclin C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCNC, Length 2,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-203ENST00000369220 KIAA0586Q9BVV6 1533 aa17.08■□□□□ 0.32
CCNC-203ENST00000369220 ERCC6L2Q5T890 1561 aa17.06■□□□□ 0.32
CCNC-203ENST00000369220 RIMBP3CA6NJZ7 1639 aa17.05■□□□□ 0.32
CCNC-203ENST00000369220 RIMBP3BA6NNM3 1639 aa17.05■□□□□ 0.32
CCNC-203ENST00000369220 RIMBP3Q9UFD9 1639 aa17.05■□□□□ 0.32
CCNC-203ENST00000369220 JPH4Q96JJ6 628 aa17.05■□□□□ 0.32
CCNC-203ENST00000369220 KIF21BO75037 1637 aa17.04■□□□□ 0.32
CCNC-203ENST00000369220 SHROOM2Q13796 1616 aa17.03■□□□□ 0.32
CCNC-203ENST00000369220 IQGAP2Q13576 1575 aa17.02■□□□□ 0.32
CCNC-203ENST00000369220 PRG4Q92954 1404 aaPredicted RBP17.01■□□□□ 0.31
CCNC-203ENST00000369220 CTTNBP2Q8WZ74 1663 aa16.99■□□□□ 0.31
CCNC-203ENST00000369220 ARAP1Q96P48 1450 aa16.98■□□□□ 0.31
CCNC-203ENST00000369220 GOLGA3Q08378 1498 aa16.97■□□□□ 0.31
CCNC-203ENST00000369220 CYB5RLQ6IPT4 315 aa16.96■□□□□ 0.3
CCNC-203ENST00000369220 UBTFP17480 764 aaKnown RBP16.94■□□□□ 0.3
CCNC-203ENST00000369220 RANGAP1P46060 587 aaPredicted RBP16.94■□□□□ 0.3
CCNC-203ENST00000369220 DISP1Q96F81 1524 aa16.92■□□□□ 0.3
CCNC-203ENST00000369220 UGGT2Q9NYU1 1516 aa16.92■□□□□ 0.3
CCNC-203ENST00000369220 TTBK1Q5TCY1 1321 aaPredicted RBP16.9■□□□□ 0.3
CCNC-203ENST00000369220 LOC105371045A0A1W2PR82 267 aa16.88■□□□□ 0.29
CCNC-203ENST00000369220 KIAA0556O60303 1618 aa16.86■□□□□ 0.29
CCNC-203ENST00000369220 CARMIL2Q6F5E8 1435 aa16.86■□□□□ 0.29
CCNC-203ENST00000369220 P3H3Q8IVL6 736 aa16.85■□□□□ 0.29
CCNC-203ENST00000369220 TNIKQ9UKE5 1360 aa16.82■□□□□ 0.28
CCNC-203ENST00000369220 PTPRGP23470 1445 aa16.81■□□□□ 0.28
CCNC-203ENST00000369220 SAMD9Q5K651 1589 aa16.81■□□□□ 0.28
CCNC-203ENST00000369220 FHOD3Q2V2M9 1422 aa16.78■□□□□ 0.28
CCNC-203ENST00000369220 ARHGAP35Q9NRY4 1499 aa16.76■□□□□ 0.27
CCNC-203ENST00000369220 PLB1Q6P1J6 1458 aa16.74■□□□□ 0.27
CCNC-203ENST00000369220 ADCY10Q96PN6 1610 aa16.73■□□□□ 0.27
CCNC-203ENST00000369220 EFCAB5A4FU69 1503 aa16.73■□□□□ 0.27
CCNC-203ENST00000369220 CLIP1P30622 1438 aa16.7■□□□□ 0.26
CCNC-203ENST00000369220 UACAQ9BZF9 1416 aa16.7■□□□□ 0.26
CCNC-203ENST00000369220 CEP162Q5TB80 1403 aa16.69■□□□□ 0.26
CCNC-203ENST00000369220 ABCC2Q92887 1545 aa16.66■□□□□ 0.26
CCNC-203ENST00000369220 ARID3CA6NKF2 412 aa16.66■□□□□ 0.26
CCNC-203ENST00000369220 ABCA8O94911 1581 aa16.66■□□□□ 0.26
CCNC-203ENST00000369220 UHRF1BP1LA0JNW5 1464 aa16.63■□□□□ 0.25
CCNC-203ENST00000369220 RAPGEF6Q8TEU7 1601 aa16.6■□□□□ 0.25
CCNC-203ENST00000369220 NUP153P49790 1475 aaKnown RBP16.59■□□□□ 0.25
CCNC-203ENST00000369220 KDM5BQ9UGL1 1544 aa16.59■□□□□ 0.25
CCNC-203ENST00000369220 FMN1Q68DA7 1419 aa16.59■□□□□ 0.25
CCNC-203ENST00000369220 NPM1P06748 294 aaKnown RBP eCLIP16.58■□□□□ 0.25
CCNC-203ENST00000369220 ZCCHC11Q5TAX3 1644 aaKnown RBP16.57■□□□□ 0.24
CCNC-203ENST00000369220 ATP1B4Q9UN42 357 aaPredicted RBP16.55■□□□□ 0.24
CCNC-203ENST00000369220 ATP10BO94823 1461 aa16.54■□□□□ 0.24
CCNC-203ENST00000369220 MAPKBP1O60336 1514 aa16.54■□□□□ 0.24
CCNC-203ENST00000369220 PCF11O94913 1555 aaKnown RBP16.54■□□□□ 0.24
CCNC-203ENST00000369220 ASXL2Q76L83 1435 aa16.53■□□□□ 0.24
CCNC-203ENST00000369220 TRHP20396 242 aaPredicted RBP16.52■□□□□ 0.24
CCNC-203ENST00000369220 CDK13Q14004 1512 aaKnown RBP16.52■□□□□ 0.23
CCNC-203ENST00000369220 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.51■□□□□ 0.23
CCNC-203ENST00000369220 HNRNPUL2Q1KMD3 747 aaKnown RBP16.51■□□□□ 0.23
CCNC-203ENST00000369220 CASKIN1Q8WXD9 1431 aa16.49■□□□□ 0.23
CCNC-203ENST00000369220 EPRSP07814 1512 aaKnown RBP16.48■□□□□ 0.23
CCNC-203ENST00000369220 HECW1Q76N89 1606 aa16.48■□□□□ 0.23
CCNC-203ENST00000369220 LRRIQ1Q96JM4 1722 aa16.48■□□□□ 0.23
CCNC-203ENST00000369220 ABCC10Q5T3U5 1492 aa16.46■□□□□ 0.23
CCNC-203ENST00000369220 FYCO1Q9BQS8 1478 aa16.46■□□□□ 0.23
CCNC-203ENST00000369220 WDR7Q9Y4E6 1490 aa16.46■□□□□ 0.23
CCNC-203ENST00000369220 DIP2BQ9P265 1576 aa16.45■□□□□ 0.22
CCNC-203ENST00000369220 VPS8Q8N3P4 1428 aa16.45■□□□□ 0.22
CCNC-203ENST00000369220 FAM69CQ0P6D2 419 aa16.45■□□□□ 0.22
CCNC-203ENST00000369220 KIF13AQ9H1H9 1805 aa16.44■□□□□ 0.22
CCNC-203ENST00000369220 KCNH8Q96L42 1107 aa16.43■□□□□ 0.22
CCNC-203ENST00000369220 PLEKHD1A6NEE1 506 aa16.38■□□□□ 0.21
CCNC-203ENST00000369220 CCDC18Q5T9S5 1454 aa16.38■□□□□ 0.21
CCNC-203ENST00000369220 MAGI3Q5TCQ9 1506 aa16.38■□□□□ 0.21
CCNC-203ENST00000369220 GLI2P10070 1586 aa16.33■□□□□ 0.21
CCNC-203ENST00000369220 TSPOAP1O95153 1857 aa16.33■□□□□ 0.2
CCNC-203ENST00000369220 CDK11AQ9UQ88 783 aaPredicted RBP16.33■□□□□ 0.2
CCNC-203ENST00000369220 TROQ12816 1431 aaPredicted RBP16.33■□□□□ 0.2
CCNC-203ENST00000369220 KIF14Q15058 1648 aa16.32■□□□□ 0.2
CCNC-203ENST00000369220 MAP3K4Q9Y6R4 1608 aa16.31■□□□□ 0.2
CCNC-203ENST00000369220 TTC37Q6PGP7 1564 aa16.3■□□□□ 0.2
CCNC-203ENST00000369220 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.3■□□□□ 0.2
CCNC-203ENST00000369220 TIAM1Q13009 1591 aa16.3■□□□□ 0.2
CCNC-203ENST00000369220 ABCA9Q8IUA7 1624 aa16.29■□□□□ 0.2
CCNC-203ENST00000369220 CD109Q6YHK3 1445 aa16.29■□□□□ 0.2
CCNC-203ENST00000369220 PPRC1Q5VV67 1664 aaKnown RBP16.28■□□□□ 0.2
CCNC-203ENST00000369220 CFAP43Q8NDM7 1665 aa16.28■□□□□ 0.2
CCNC-203ENST00000369220 MTUS2Q5JR59 1369 aa16.28■□□□□ 0.2
CCNC-203ENST00000369220 KANK4Q5T7N3 995 aaPredicted RBP16.28■□□□□ 0.2
CCNC-203ENST00000369220 LRRC9Q6ZRR7 1453 aa16.23■□□□□ 0.19
CCNC-203ENST00000369220 EHBP1L1Q8N3D4 1523 aa16.22■□□□□ 0.19
CCNC-203ENST00000369220 MAP3K1Q13233 1512 aa16.21■□□□□ 0.19
CCNC-203ENST00000369220 APLP2Q06481 763 aa16.21■□□□□ 0.18
CCNC-203ENST00000369220 COL17A1Q9UMD9 1497 aaPredicted RBP16.18■□□□□ 0.18
CCNC-203ENST00000369220 TEX14Q8IWB6 1497 aa16.18■□□□□ 0.18
CCNC-203ENST00000369220 PPARGC1BQ86YN6 1023 aaKnown RBP16.18■□□□□ 0.18
CCNC-203ENST00000369220 PLCH2O75038 1416 aa16.18■□□□□ 0.18
CCNC-203ENST00000369220 FANCAO15360 1455 aa16.17■□□□□ 0.18
CCNC-203ENST00000369220 NCOA2Q15596 1464 aa16.17■□□□□ 0.18
CCNC-203ENST00000369220 MYO5CQ9NQX4 1742 aa16.16■□□□□ 0.18
CCNC-203ENST00000369220 GPATCH8Q9UKJ3 1502 aaKnown RBP16.15■□□□□ 0.18
CCNC-203ENST00000369220 CDC42BPAQ5VT25 1732 aa16.15■□□□□ 0.18
CCNC-203ENST00000369220 ARHGAP5Q13017 1502 aa16.14■□□□□ 0.17
CCNC-203ENST00000369220 SUPT6HQ7KZ85 1726 aaKnown RBP16.14■□□□□ 0.17
CCNC-203ENST00000369220 CDC42BPBQ9Y5S2 1711 aa16.14■□□□□ 0.17
CCNC-203ENST00000369220 CCNB3Q8WWL7 1395 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms