RNA–Protein interactions for RNA: ENST00000368913.7

SEMA6C-203, Transcript of semaphorin 6C, humanhuman

APPRIS P1 TSL 1 (best)

Gene SEMA6C, Length 3,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-203ENST00000368913 POLR3GLQ9BT43 218 aa17.46■□□□□ 0.39
SEMA6C-203ENST00000368913 CHIC2Q9UKJ5 165 aa17.46■□□□□ 0.39
SEMA6C-203ENST00000368913 ERICH6BQ5W0A0 696 aa17.45■□□□□ 0.38
SEMA6C-203ENST00000368913 BICRAQ9NZM4 1560 aa17.43■□□□□ 0.38
SEMA6C-203ENST00000368913 VSIG10Q8N0Z9 540 aa17.43■□□□□ 0.38
SEMA6C-203ENST00000368913 TRIM52Q96A61 297 aa17.41■□□□□ 0.38
SEMA6C-203ENST00000368913 UNC13AQ9UPW8 1703 aa17.38■□□□□ 0.37
SEMA6C-203ENST00000368913 CUX2O14529 1486 aa17.38■□□□□ 0.37
SEMA6C-203ENST00000368913 CEP164Q9UPV0 1460 aa17.37■□□□□ 0.37
SEMA6C-203ENST00000368913 MYT1LQ9UL68 1186 aa17.36■□□□□ 0.37
SEMA6C-203ENST00000368913 ZNF777Q9ULD5 760 aaPredicted RBP17.36■□□□□ 0.37
SEMA6C-203ENST00000368913 TDRD9Q8NDG6 1382 aaKnown RBP17.36■□□□□ 0.37
SEMA6C-203ENST00000368913 RTL5Q5HYW3 569 aaPredicted RBP17.34■□□□□ 0.37
SEMA6C-203ENST00000368913 KIF27Q86VH2 1401 aa17.33■□□□□ 0.36
SEMA6C-203ENST00000368913 NEFLP07196 543 aa17.32■□□□□ 0.36
SEMA6C-203ENST00000368913 ZMYND15Q9H091 742 aa17.31■□□□□ 0.36
SEMA6C-203ENST00000368913 SYNJ1O43426 1573 aa17.3■□□□□ 0.36
SEMA6C-203ENST00000368913 ZNF326Q5BKZ1 582 aaKnown RBP17.3■□□□□ 0.36
SEMA6C-203ENST00000368913 EEA1Q15075 1411 aa17.3■□□□□ 0.36
SEMA6C-203ENST00000368913 CLSPNQ9HAW4 1339 aa17.29■□□□□ 0.36
SEMA6C-203ENST00000368913 SIN3AQ96ST3 1273 aa17.28■□□□□ 0.36
SEMA6C-203ENST00000368913 PDE4CQ08493 712 aa17.27■□□□□ 0.35
SEMA6C-203ENST00000368913 GLIPR1L2Q4G1C9 344 aa17.25■□□□□ 0.35
SEMA6C-203ENST00000368913 CARMIL1Q5VZK9 1371 aa17.25■□□□□ 0.35
SEMA6C-203ENST00000368913 RRP7BPQ9NSQ0 103 aa17.25■□□□□ 0.35
SEMA6C-203ENST00000368913 EIF4G1Q04637 1599 aaKnown RBP17.23■□□□□ 0.35
SEMA6C-203ENST00000368913 NESP48681 1621 aa17.23■□□□□ 0.35
SEMA6C-203ENST00000368913 SENP3-EIF4A1A0A087X0R7 540 aa17.2■□□□□ 0.34
SEMA6C-203ENST00000368913 CADPSQ9ULU8 1353 aa17.19■□□□□ 0.34
SEMA6C-203ENST00000368913 DDX10Q13206 875 aaKnown RBP17.19■□□□□ 0.34
SEMA6C-203ENST00000368913 RAD54L2Q9Y4B4 1467 aa17.18■□□□□ 0.34
SEMA6C-203ENST00000368913 VPS8Q8N3P4 1428 aa17.18■□□□□ 0.34
SEMA6C-203ENST00000368913 BCL11BQ9C0K0 894 aaPredicted RBP17.15■□□□□ 0.34
SEMA6C-203ENST00000368913 MTUS2Q5JR59 1369 aa17.13■□□□□ 0.33
SEMA6C-203ENST00000368913 CDK11AQ9UQ88 783 aaPredicted RBP17.12■□□□□ 0.33
SEMA6C-203ENST00000368913 CHMP7Q8WUX9 453 aaPredicted RBP17.12■□□□□ 0.33
SEMA6C-203ENST00000368913 FHOD3Q2V2M9 1422 aa17.11■□□□□ 0.33
SEMA6C-203ENST00000368913 PDIA4P13667 645 aaKnown RBP17.09■□□□□ 0.33
SEMA6C-203ENST00000368913 FOXD1Q16676 465 aa17.09■□□□□ 0.33
SEMA6C-203ENST00000368913 IRX6P78412 446 aaPredicted RBP17.08■□□□□ 0.32
SEMA6C-203ENST00000368913 IGF1RP08069 1367 aa17.06■□□□□ 0.32
SEMA6C-203ENST00000368913 RBM10P98175 930 aaKnown RBP17.06■□□□□ 0.32
SEMA6C-203ENST00000368913 SENP3Q9H4L4 574 aaPredicted RBP17.06■□□□□ 0.32
SEMA6C-203ENST00000368913 NCAPD3P42695 1498 aa17.05■□□□□ 0.32
SEMA6C-203ENST00000368913 FANCD2Q9BXW9 1451 aa17.05■□□□□ 0.32
SEMA6C-203ENST00000368913 FGD5Q6ZNL6 1462 aa17.04■□□□□ 0.32
SEMA6C-203ENST00000368913 FANCIQ9NVI1 1328 aa17.04■□□□□ 0.32
SEMA6C-203ENST00000368913 PAK3O75914 559 aaPredicted RBP17.03■□□□□ 0.32
SEMA6C-203ENST00000368913 BRPF3Q9ULD4 1205 aa17.03■□□□□ 0.32
SEMA6C-203ENST00000368913 NOP58Q9Y2X3 529 aaKnown RBP17.03■□□□□ 0.32
SEMA6C-203ENST00000368913 CUX1P39880 1505 aa17.02■□□□□ 0.32
SEMA6C-203ENST00000368913 CCNB3Q8WWL7 1395 aa17.02■□□□□ 0.31
SEMA6C-203ENST00000368913 KCNH8Q96L42 1107 aa17■□□□□ 0.31
SEMA6C-203ENST00000368913 KLHL34Q8N239 644 aa16.99■□□□□ 0.31
SEMA6C-203ENST00000368913 ARAP1Q96P48 1450 aa16.99■□□□□ 0.31
SEMA6C-203ENST00000368913 CC2D2AQ9P2K1 1620 aa16.97■□□□□ 0.31
SEMA6C-203ENST00000368913 FGD1P98174 961 aa16.97■□□□□ 0.31
SEMA6C-203ENST00000368913 KIF21BO75037 1637 aa16.96■□□□□ 0.31
SEMA6C-203ENST00000368913 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.95■□□□□ 0.37e-6■□□□□ 10.8
SEMA6C-203ENST00000368913 CFTRP13569 1480 aa16.93■□□□□ 0.3
SEMA6C-203ENST00000368913 ERCC6Q03468 1493 aa16.93■□□□□ 0.3
SEMA6C-203ENST00000368913 KDM2AQ9Y2K7 1162 aa16.92■□□□□ 0.3
SEMA6C-203ENST00000368913 RAB3GAP2Q9H2M9 1393 aa16.91■□□□□ 0.3
SEMA6C-203ENST00000368913 TONSLQ96HA7 1378 aa16.91■□□□□ 0.3
SEMA6C-203ENST00000368913 AQRO60306 1485 aaKnown RBP eCLIP16.9■□□□□ 0.3
SEMA6C-203ENST00000368913 AAMPQ13685 434 aa16.9■□□□□ 0.3
SEMA6C-203ENST00000368913 NEFMP07197 916 aa16.88■□□□□ 0.29
SEMA6C-203ENST00000368913 LAS1LQ9Y4W2 734 aaKnown RBP16.88■□□□□ 0.29
SEMA6C-203ENST00000368913 ARID4BQ4LE39 1312 aaPredicted RBP16.87■□□□□ 0.29
SEMA6C-203ENST00000368913 ARHGAP35Q9NRY4 1499 aa16.84■□□□□ 0.29
SEMA6C-203ENST00000368913 PDS5BQ9NTI5 1447 aa16.84■□□□□ 0.29
SEMA6C-203ENST00000368913 ANP32CO43423 234 aa16.83■□□□□ 0.29
SEMA6C-203ENST00000368913 PHLDB1Q86UU1 1377 aa16.83■□□□□ 0.29
SEMA6C-203ENST00000368913 TOP2BQ02880 1626 aa16.83■□□□□ 0.29
SEMA6C-203ENST00000368913 DHX57Q6P158 1386 aaKnown RBP16.82■□□□□ 0.28
SEMA6C-203ENST00000368913 SLC4A1APQ9BWU0 796 aaKnown RBP16.82■□□□□ 0.28
SEMA6C-203ENST00000368913 PAXIP1Q6ZW49 1069 aaPredicted RBP16.81■□□□□ 0.28
SEMA6C-203ENST00000368913 PRXQ9BXM0 1461 aa16.81■□□□□ 0.28
SEMA6C-203ENST00000368913 ZNF644Q9H582 1327 aaPredicted RBP16.81■□□□□ 0.28
SEMA6C-203ENST00000368913 RSPH6AQ9H0K4 717 aa16.81■□□□□ 0.28
SEMA6C-203ENST00000368913 RGL3Q3MIN7 710 aa16.8■□□□□ 0.28
SEMA6C-203ENST00000368913 CFDP1Q9UEE9 299 aaPredicted RBP16.79■□□□□ 0.28
SEMA6C-203ENST00000368913 ZBTB47Q9UFB7 747 aaPredicted RBP16.79■□□□□ 0.28
SEMA6C-203ENST00000368913 NPM2Q86SE8 214 aaKnown RBP16.78■□□□□ 0.28
SEMA6C-203ENST00000368913 FAM9BQ8IZU0 186 aa16.78■□□□□ 0.28
SEMA6C-203ENST00000368913 C11orf95C9JLR9 678 aaPredicted RBP16.77■□□□□ 0.28
SEMA6C-203ENST00000368913 HSP90AA2PQ14568 343 aaPredicted RBP16.76■□□□□ 0.27
SEMA6C-203ENST00000368913 POLA1P09884 1462 aaPredicted RBP16.75■□□□□ 0.27
SEMA6C-203ENST00000368913 PEG3Q9GZU2 1588 aa16.74■□□□□ 0.27
SEMA6C-203ENST00000368913 FHAD1B1AJZ9 1412 aa16.74■□□□□ 0.27
SEMA6C-203ENST00000368913 SETD5Q9C0A6 1442 aa16.72■□□□□ 0.27
SEMA6C-203ENST00000368913 ANP32AP39687 249 aaKnown RBP16.72■□□□□ 0.27
SEMA6C-203ENST00000368913 NAP1L5Q96NT1 182 aaPredicted RBP16.72■□□□□ 0.27
SEMA6C-203ENST00000368913 HMGXB3Q12766 1538 aa16.71■□□□□ 0.27
SEMA6C-203ENST00000368913 GAPVD1Q14C86 1478 aa16.71■□□□□ 0.27
SEMA6C-203ENST00000368913 PLEKHD1A6NEE1 506 aa16.7■□□□□ 0.26
SEMA6C-203ENST00000368913 HNRNPUQ00839 825 aaKnown RBP eCLIP16.7■□□□□ 0.26
SEMA6C-203ENST00000368913 TOPBP1Q92547 1522 aa16.7■□□□□ 0.26
SEMA6C-203ENST00000368913 PLPPR3Q6T4P5 718 aa16.66■□□□□ 0.26
SEMA6C-203ENST00000368913 TSPY4P0CV99 314 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms