RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 GRIN2AQ12879 1464 aa30.58■■■□□ 2.49
CHTOP-204ENST00000368694 ARAP1Q96P48 1450 aa30.57■■■□□ 2.48
CHTOP-204ENST00000368694 VPS8Q8N3P4 1428 aa30.56■■■□□ 2.48
CHTOP-204ENST00000368694 CHMP7Q8WUX9 453 aaPredicted RBP30.55■■■□□ 2.48
CHTOP-204ENST00000368694 FBLN2P98095 1184 aa30.53■■■□□ 2.48
CHTOP-204ENST00000368694 IQGAP2Q13576 1575 aa30.49■■■□□ 2.47
CHTOP-204ENST00000368694 EFCAB5A4FU69 1503 aa30.48■■■□□ 2.47
CHTOP-204ENST00000368694 P3H3Q8IVL6 736 aa30.4■■■□□ 2.46
CHTOP-204ENST00000368694 CEP170Q5SW79 1584 aa30.4■■■□□ 2.46
CHTOP-204ENST00000368694 PPARGC1BQ86YN6 1023 aaKnown RBP30.39■■■□□ 2.46
CHTOP-204ENST00000368694 KIAA0586Q9BVV6 1533 aa30.39■■■□□ 2.46
CHTOP-204ENST00000368694 SAMD9Q5K651 1589 aa30.38■■■□□ 2.45
CHTOP-204ENST00000368694 CHD1O14646 1710 aa30.38■■■□□ 2.45
CHTOP-204ENST00000368694 FHOD3Q2V2M9 1422 aa30.36■■■□□ 2.45
CHTOP-204ENST00000368694 NUP160Q12769 1436 aa30.33■■■□□ 2.45
CHTOP-204ENST00000368694 APLP2Q06481 763 aa30.31■■■□□ 2.44
CHTOP-204ENST00000368694 UGGT2Q9NYU1 1516 aa30.28■■■□□ 2.44
CHTOP-204ENST00000368694 TTBK1Q5TCY1 1321 aaPredicted RBP30.23■■■□□ 2.43
CHTOP-204ENST00000368694 TRIM26Q12899 539 aaPredicted RBP30.21■■■□□ 2.43
CHTOP-204ENST00000368694 PCF11O94913 1555 aaKnown RBP30.21■■■□□ 2.43
CHTOP-204ENST00000368694 PCGF6Q9BYE7 350 aa30.2■■■□□ 2.43
CHTOP-204ENST00000368694 FMN1Q68DA7 1419 aa30.2■■■□□ 2.42
CHTOP-204ENST00000368694 KIAA0556O60303 1618 aa30.17■■■□□ 2.42
CHTOP-204ENST00000368694 DISP1Q96F81 1524 aa30.15■■■□□ 2.42
CHTOP-204ENST00000368694 FYCO1Q9BQS8 1478 aa30.12■■■□□ 2.41
CHTOP-204ENST00000368694 JPH4Q96JJ6 628 aa30.11■■■□□ 2.41
CHTOP-204ENST00000368694 ATP1B4Q9UN42 357 aaPredicted RBP30.1■■■□□ 2.41
CHTOP-204ENST00000368694 CASKIN1Q8WXD9 1431 aa30.09■■■□□ 2.41
CHTOP-204ENST00000368694 CARMIL2Q6F5E8 1435 aa30.05■■■□□ 2.4
CHTOP-204ENST00000368694 TIAM1Q13009 1591 aa30.04■■■□□ 2.4
CHTOP-204ENST00000368694 CFAP43Q8NDM7 1665 aa30.02■■■□□ 2.4
CHTOP-204ENST00000368694 MAP3K1Q13233 1512 aa30.01■■■□□ 2.39
CHTOP-204ENST00000368694 KANK4Q5T7N3 995 aaPredicted RBP29.98■■■□□ 2.39
CHTOP-204ENST00000368694 SHROOM2Q13796 1616 aa29.96■■■□□ 2.39
CHTOP-204ENST00000368694 LRRIQ1Q96JM4 1722 aa29.95■■■□□ 2.39
CHTOP-204ENST00000368694 CLASP1Q7Z460 1538 aa29.95■■■□□ 2.39
CHTOP-204ENST00000368694 PRG4Q92954 1404 aaPredicted RBP29.95■■■□□ 2.38
CHTOP-204ENST00000368694 HECW1Q76N89 1606 aa29.94■■■□□ 2.38
CHTOP-204ENST00000368694 LRRC9Q6ZRR7 1453 aa29.88■■■□□ 2.37
CHTOP-204ENST00000368694 RAPGEF6Q8TEU7 1601 aa29.87■■■□□ 2.37
CHTOP-204ENST00000368694 CCDC18Q5T9S5 1454 aa29.84■■■□□ 2.37
CHTOP-204ENST00000368694 EPRSP07814 1512 aaKnown RBP29.8■■■□□ 2.36
CHTOP-204ENST00000368694 PLB1Q6P1J6 1458 aa29.79■■■□□ 2.36
CHTOP-204ENST00000368694 ERCC6L2Q5T890 1561 aa29.78■■■□□ 2.36
CHTOP-204ENST00000368694 CDK13Q14004 1512 aaKnown RBP29.76■■■□□ 2.35
CHTOP-204ENST00000368694 ARID3CA6NKF2 412 aa29.75■■■□□ 2.35
CHTOP-204ENST00000368694 NUP153P49790 1475 aaKnown RBP29.75■■■□□ 2.35
CHTOP-204ENST00000368694 MTUS2Q5JR59 1369 aa29.75■■■□□ 2.35
CHTOP-204ENST00000368694 PTPRGP23470 1445 aa29.74■■■□□ 2.35
CHTOP-204ENST00000368694 OSCARQ8IYS5 282 aa29.73■■■□□ 2.35
CHTOP-204ENST00000368694 ABCA8O94911 1581 aa29.71■■■□□ 2.35
CHTOP-204ENST00000368694 EHBP1L1Q8N3D4 1523 aa29.69■■■□□ 2.34
CHTOP-204ENST00000368694 MAGI3Q5TCQ9 1506 aa29.65■■■□□ 2.34
CHTOP-204ENST00000368694 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.64■■■□□ 2.34
CHTOP-204ENST00000368694 HNRNPUL2Q1KMD3 747 aaKnown RBP29.64■■■□□ 2.34
CHTOP-204ENST00000368694 SUPT6HQ7KZ85 1726 aaKnown RBP29.63■■■□□ 2.33
CHTOP-204ENST00000368694 PHLDB1Q86UU1 1377 aa29.6■■■□□ 2.33
CHTOP-204ENST00000368694 RRBP1Q9P2E9 1410 aaKnown RBP29.59■■■□□ 2.33
CHTOP-204ENST00000368694 UACAQ9BZF9 1416 aa29.57■■■□□ 2.32
CHTOP-204ENST00000368694 CDK11AQ9UQ88 783 aaPredicted RBP29.56■■■□□ 2.32
CHTOP-204ENST00000368694 NCOA2Q15596 1464 aa29.55■■■□□ 2.32
CHTOP-204ENST00000368694 CCNB3Q8WWL7 1395 aa29.54■■■□□ 2.32
CHTOP-204ENST00000368694 ATP10BO94823 1461 aa29.5■■■□□ 2.31
CHTOP-204ENST00000368694 ABCC2Q92887 1545 aa29.5■■■□□ 2.31
CHTOP-204ENST00000368694 ARHGEF11O15085 1522 aa29.46■■■□□ 2.31
CHTOP-204ENST00000368694 TROQ12816 1431 aaPredicted RBP29.45■■■□□ 2.3
CHTOP-204ENST00000368694 MYOM3Q5VTT5 1437 aa29.42■■■□□ 2.3
CHTOP-204ENST00000368694 FGD6Q6ZV73 1430 aa29.41■■■□□ 2.3
CHTOP-204ENST00000368694 PLEKHD1A6NEE1 506 aa29.39■■■□□ 2.3
CHTOP-204ENST00000368694 FAM50AQ14320 339 aaKnown RBP29.39■■■□□ 2.3
CHTOP-204ENST00000368694 UHRF1BP1LA0JNW5 1464 aa29.39■■■□□ 2.3
CHTOP-204ENST00000368694 ADCY10Q96PN6 1610 aa29.38■■■□□ 2.29
CHTOP-204ENST00000368694 KIF14Q15058 1648 aa29.36■■■□□ 2.29
CHTOP-204ENST00000368694 ZCCHC11Q5TAX3 1644 aaKnown RBP29.34■■■□□ 2.29
CHTOP-204ENST00000368694 ITGAEP38570 1179 aa29.33■■■□□ 2.29
CHTOP-204ENST00000368694 PTPN23Q9H3S7 1636 aa29.31■■■□□ 2.28
CHTOP-204ENST00000368694 KDM5BQ9UGL1 1544 aa29.29■■■□□ 2.28
CHTOP-204ENST00000368694 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.28■■■□□ 2.28
CHTOP-204ENST00000368694 ITSN2Q9NZM3 1697 aa29.26■■■□□ 2.27
CHTOP-204ENST00000368694 MIA2Q96PC5 1412 aa29.24■■■□□ 2.27
CHTOP-204ENST00000368694 TCOF1Q13428 1488 aaKnown RBP29.19■■■□□ 2.26
CHTOP-204ENST00000368694 CDC42BPAQ5VT25 1732 aa29.18■■■□□ 2.26
CHTOP-204ENST00000368694 ABCC10Q5T3U5 1492 aa29.18■■■□□ 2.26
CHTOP-204ENST00000368694 GPATCH8Q9UKJ3 1502 aaKnown RBP29.17■■■□□ 2.26
CHTOP-204ENST00000368694 RIMBP3CA6NJZ7 1639 aa29.15■■■□□ 2.26
CHTOP-204ENST00000368694 RIMBP3BA6NNM3 1639 aa29.15■■■□□ 2.26
CHTOP-204ENST00000368694 RIMBP3Q9UFD9 1639 aa29.15■■■□□ 2.26
CHTOP-204ENST00000368694 HRCP23327 699 aa29.14■■■□□ 2.26
CHTOP-204ENST00000368694 CFDP1Q9UEE9 299 aaPredicted RBP29.13■■■□□ 2.25
CHTOP-204ENST00000368694 KCNH8Q96L42 1107 aa29.1■■■□□ 2.25
CHTOP-204ENST00000368694 TTC37Q6PGP7 1564 aa29.09■■■□□ 2.25
CHTOP-204ENST00000368694 CCER1Q8TC90 406 aaPredicted RBP29.09■■■□□ 2.25
CHTOP-204ENST00000368694 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.09■■■□□ 2.25
CHTOP-204ENST00000368694 NPM1P06748 294 aaKnown RBP eCLIP29.06■■■□□ 2.24
CHTOP-204ENST00000368694 CAMSAP2Q08AD1 1489 aa29.06■■■□□ 2.24
CHTOP-204ENST00000368694 PREX2Q70Z35 1606 aa29.06■■■□□ 2.24
CHTOP-204ENST00000368694 WDR7Q9Y4E6 1490 aa29.05■■■□□ 2.24
CHTOP-204ENST00000368694 ZNF644Q9H582 1327 aaPredicted RBP29.05■■■□□ 2.24
CHTOP-204ENST00000368694 ZNF777Q9ULD5 760 aaPredicted RBP29.05■■■□□ 2.24
CHTOP-204ENST00000368694 MYO5CQ9NQX4 1742 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms