RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 NUP160Q12769 1436 aa19.66■□□□□ 0.74
TUBE1-202ENST00000368662 CLIP1P30622 1438 aa19.66■□□□□ 0.74
TUBE1-202ENST00000368662 KIAA0586Q9BVV6 1533 aa19.65■□□□□ 0.74
TUBE1-202ENST00000368662 CHD1O14646 1710 aa19.65■□□□□ 0.74
TUBE1-202ENST00000368662 CEP170Q5SW79 1584 aa19.63■□□□□ 0.73
TUBE1-202ENST00000368662 IQGAP2Q13576 1575 aa19.62■□□□□ 0.73
TUBE1-202ENST00000368662 RANGAP1P46060 587 aaPredicted RBP19.59■□□□□ 0.73
TUBE1-202ENST00000368662 EFCAB5A4FU69 1503 aa19.57■□□□□ 0.72
TUBE1-202ENST00000368662 ARHGAP35Q9NRY4 1499 aa19.54■□□□□ 0.72
TUBE1-202ENST00000368662 UGGT2Q9NYU1 1516 aa19.54■□□□□ 0.72
TUBE1-202ENST00000368662 SAMD9Q5K651 1589 aa19.51■□□□□ 0.71
TUBE1-202ENST00000368662 JPH4Q96JJ6 628 aa19.48■□□□□ 0.71
TUBE1-202ENST00000368662 ARAP1Q96P48 1450 aa19.48■□□□□ 0.71
TUBE1-202ENST00000368662 CLASP1Q7Z460 1538 aa19.46■□□□□ 0.71
TUBE1-202ENST00000368662 OSCARQ8IYS5 282 aa19.46■□□□□ 0.71
TUBE1-202ENST00000368662 VPS8Q8N3P4 1428 aa19.45■□□□□ 0.7
TUBE1-202ENST00000368662 CARMIL2Q6F5E8 1435 aa19.44■□□□□ 0.7
TUBE1-202ENST00000368662 DISP1Q96F81 1524 aa19.43■□□□□ 0.7
TUBE1-202ENST00000368662 KIAA0556O60303 1618 aa19.42■□□□□ 0.7
TUBE1-202ENST00000368662 SHROOM2Q13796 1616 aa19.42■□□□□ 0.7
TUBE1-202ENST00000368662 FHOD3Q2V2M9 1422 aa19.42■□□□□ 0.7
TUBE1-202ENST00000368662 P3H3Q8IVL6 736 aa19.42■□□□□ 0.7
TUBE1-202ENST00000368662 FMN1Q68DA7 1419 aa19.4■□□□□ 0.7
TUBE1-202ENST00000368662 PRG4Q92954 1404 aaPredicted RBP19.38■□□□□ 0.69
TUBE1-202ENST00000368662 CASKIN1Q8WXD9 1431 aa19.29■□□□□ 0.68
TUBE1-202ENST00000368662 FYCO1Q9BQS8 1478 aa19.29■□□□□ 0.68
TUBE1-202ENST00000368662 APLP2Q06481 763 aa19.28■□□□□ 0.68
TUBE1-202ENST00000368662 PCF11O94913 1555 aaKnown RBP19.26■□□□□ 0.67
TUBE1-202ENST00000368662 PTPRGP23470 1445 aa19.25■□□□□ 0.67
TUBE1-202ENST00000368662 ERCC6L2Q5T890 1561 aa19.22■□□□□ 0.67
TUBE1-202ENST00000368662 TTBK1Q5TCY1 1321 aaPredicted RBP19.21■□□□□ 0.67
TUBE1-202ENST00000368662 HECW1Q76N89 1606 aa19.21■□□□□ 0.67
TUBE1-202ENST00000368662 MAP3K1Q13233 1512 aa19.2■□□□□ 0.66
TUBE1-202ENST00000368662 ATP1B4Q9UN42 357 aaPredicted RBP19.19■□□□□ 0.66
TUBE1-202ENST00000368662 RAPGEF6Q8TEU7 1601 aa19.19■□□□□ 0.66
TUBE1-202ENST00000368662 CCDC18Q5T9S5 1454 aa19.17■□□□□ 0.66
TUBE1-202ENST00000368662 PLB1Q6P1J6 1458 aa19.16■□□□□ 0.66
TUBE1-202ENST00000368662 ABCA8O94911 1581 aa19.16■□□□□ 0.66
TUBE1-202ENST00000368662 TIAM1Q13009 1591 aa19.15■□□□□ 0.66
TUBE1-202ENST00000368662 UACAQ9BZF9 1416 aa19.13■□□□□ 0.65
TUBE1-202ENST00000368662 NUP153P49790 1475 aaKnown RBP19.13■□□□□ 0.65
TUBE1-202ENST00000368662 CFAP43Q8NDM7 1665 aa19.12■□□□□ 0.65
TUBE1-202ENST00000368662 EPRSP07814 1512 aaKnown RBP19.12■□□□□ 0.65
TUBE1-202ENST00000368662 ARHGEF11O15085 1522 aa19.11■□□□□ 0.65
TUBE1-202ENST00000368662 ABCC2Q92887 1545 aa19.08■□□□□ 0.65
TUBE1-202ENST00000368662 UHRF1BP1LA0JNW5 1464 aa19.08■□□□□ 0.65
TUBE1-202ENST00000368662 LRRIQ1Q96JM4 1722 aa19.08■□□□□ 0.64
TUBE1-202ENST00000368662 LRRC9Q6ZRR7 1453 aa19.07■□□□□ 0.64
TUBE1-202ENST00000368662 PPARGC1BQ86YN6 1023 aaKnown RBP19.06■□□□□ 0.64
TUBE1-202ENST00000368662 KANK4Q5T7N3 995 aaPredicted RBP19.05■□□□□ 0.64
TUBE1-202ENST00000368662 CDK11AQ9UQ88 783 aaPredicted RBP19.05■□□□□ 0.64
TUBE1-202ENST00000368662 CDK13Q14004 1512 aaKnown RBP19.04■□□□□ 0.64
TUBE1-202ENST00000368662 MTUS2Q5JR59 1369 aa19.03■□□□□ 0.64
TUBE1-202ENST00000368662 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.02■□□□□ 0.64
TUBE1-202ENST00000368662 HNRNPUL2Q1KMD3 747 aaKnown RBP19.02■□□□□ 0.64
TUBE1-202ENST00000368662 RIMBP3CA6NJZ7 1639 aa19.02■□□□□ 0.64
TUBE1-202ENST00000368662 RIMBP3BA6NNM3 1639 aa19.02■□□□□ 0.64
TUBE1-202ENST00000368662 RIMBP3Q9UFD9 1639 aa19.02■□□□□ 0.64
TUBE1-202ENST00000368662 ATP10BO94823 1461 aa19.01■□□□□ 0.63
TUBE1-202ENST00000368662 ARID3CA6NKF2 412 aa19.01■□□□□ 0.63
TUBE1-202ENST00000368662 EHBP1L1Q8N3D4 1523 aa19.01■□□□□ 0.63
TUBE1-202ENST00000368662 KDM5BQ9UGL1 1544 aa18.98■□□□□ 0.63
TUBE1-202ENST00000368662 ADCY10Q96PN6 1610 aa18.97■□□□□ 0.63
TUBE1-202ENST00000368662 PLEKHD1A6NEE1 506 aa18.95■□□□□ 0.62
TUBE1-202ENST00000368662 MAGI3Q5TCQ9 1506 aa18.95■□□□□ 0.62
TUBE1-202ENST00000368662 TROQ12816 1431 aaPredicted RBP18.93■□□□□ 0.62
TUBE1-202ENST00000368662 TRIM26Q12899 539 aaPredicted RBP18.93■□□□□ 0.62
TUBE1-202ENST00000368662 SUPT6HQ7KZ85 1726 aaKnown RBP18.92■□□□□ 0.62
TUBE1-202ENST00000368662 ZCCHC11Q5TAX3 1644 aaKnown RBP18.92■□□□□ 0.62
TUBE1-202ENST00000368662 NPM1P06748 294 aaKnown RBP eCLIP18.91■□□□□ 0.62
TUBE1-202ENST00000368662 CYB5RLQ6IPT4 315 aa18.91■□□□□ 0.62
TUBE1-202ENST00000368662 NCOA2Q15596 1464 aa18.89■□□□□ 0.61
TUBE1-202ENST00000368662 KIF14Q15058 1648 aa18.84■□□□□ 0.61
TUBE1-202ENST00000368662 PHLDB1Q86UU1 1377 aa18.84■□□□□ 0.61
TUBE1-202ENST00000368662 RRBP1Q9P2E9 1410 aaKnown RBP18.82■□□□□ 0.6
TUBE1-202ENST00000368662 WDR7Q9Y4E6 1490 aa18.81■□□□□ 0.6
TUBE1-202ENST00000368662 MYOM3Q5VTT5 1437 aa18.81■□□□□ 0.6
TUBE1-202ENST00000368662 CCNB3Q8WWL7 1395 aa18.79■□□□□ 0.6
TUBE1-202ENST00000368662 ASXL2Q76L83 1435 aa18.79■□□□□ 0.6
TUBE1-202ENST00000368662 FGD6Q6ZV73 1430 aa18.77■□□□□ 0.6
TUBE1-202ENST00000368662 PCGF6Q9BYE7 350 aa18.77■□□□□ 0.6
TUBE1-202ENST00000368662 ABCC10Q5T3U5 1492 aa18.76■□□□□ 0.59
TUBE1-202ENST00000368662 MIA2Q96PC5 1412 aa18.76■□□□□ 0.59
TUBE1-202ENST00000368662 MAPKBP1O60336 1514 aa18.76■□□□□ 0.59
TUBE1-202ENST00000368662 DNAJC5Q9H3Z4 198 aa18.76■□□□□ 0.59
TUBE1-202ENST00000368662 KCNH8Q96L42 1107 aa18.74■□□□□ 0.59
TUBE1-202ENST00000368662 ITSN2Q9NZM3 1697 aa18.74■□□□□ 0.59
TUBE1-202ENST00000368662 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.74■□□□□ 0.59
TUBE1-202ENST00000368662 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.73■□□□□ 0.59
TUBE1-202ENST00000368662 GPATCH8Q9UKJ3 1502 aaKnown RBP18.73■□□□□ 0.59
TUBE1-202ENST00000368662 CFDP1Q9UEE9 299 aaPredicted RBP18.7■□□□□ 0.58
TUBE1-202ENST00000368662 TTC37Q6PGP7 1564 aa18.7■□□□□ 0.58
TUBE1-202ENST00000368662 TCOF1Q13428 1488 aaKnown RBP18.68■□□□□ 0.58
TUBE1-202ENST00000368662 PTPN23Q9H3S7 1636 aa18.68■□□□□ 0.58
TUBE1-202ENST00000368662 FAM50AQ14320 339 aaKnown RBP18.68■□□□□ 0.58
TUBE1-202ENST00000368662 CDC42BPAQ5VT25 1732 aa18.67■□□□□ 0.58
TUBE1-202ENST00000368662 ABCA9Q8IUA7 1624 aa18.67■□□□□ 0.58
TUBE1-202ENST00000368662 PREX2Q70Z35 1606 aa18.66■□□□□ 0.58
TUBE1-202ENST00000368662 MYO5CQ9NQX4 1742 aa18.65■□□□□ 0.58
TUBE1-202ENST00000368662 PLCH2O75038 1416 aa18.64■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms