RNA–Protein interactions for RNA: ENST00000368563.6

TUBGCP2-203, Transcript of tubulin gamma complex associated protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,218 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-203ENST00000368563 CFDP1Q9UEE9 299 aaPredicted RBP21.97■■□□□ 1.11
TUBGCP2-203ENST00000368563 PDS5BQ9NTI5 1447 aa21.95■■□□□ 1.1
TUBGCP2-203ENST00000368563 EIF4G1Q04637 1599 aaKnown RBP21.93■■□□□ 1.1
TUBGCP2-203ENST00000368563 SENP3Q9H4L4 574 aaPredicted RBP21.92■■□□□ 1.1
TUBGCP2-203ENST00000368563 SIN3AQ96ST3 1273 aa21.9■■□□□ 1.1
TUBGCP2-203ENST00000368563 VPS8Q8N3P4 1428 aa21.87■■□□□ 1.09
TUBGCP2-203ENST00000368563 RAPGEF2Q9Y4G8 1499 aa21.86■■□□□ 1.09
TUBGCP2-203ENST00000368563 MIER1Q8N108 512 aa21.85■■□□□ 1.09
TUBGCP2-203ENST00000368563 ESF1Q9H501 851 aaKnown RBP21.85■■□□□ 1.09
TUBGCP2-203ENST00000368563 ACIN1Q9UKV3 1341 aaKnown RBP21.85■■□□□ 1.09
TUBGCP2-203ENST00000368563 RGL3Q3MIN7 710 aa21.83■■□□□ 1.09
TUBGCP2-203ENST00000368563 STAG3Q9UJ98 1225 aa21.82■■□□□ 1.08
TUBGCP2-203ENST00000368563 CCNB3Q8WWL7 1395 aa21.82■■□□□ 1.08
TUBGCP2-203ENST00000368563 FHAD1B1AJZ9 1412 aa21.8■■□□□ 1.08
TUBGCP2-203ENST00000368563 FAM9BQ8IZU0 186 aa21.77■■□□□ 1.08
TUBGCP2-203ENST00000368563 FANCD2Q9BXW9 1451 aa21.75■■□□□ 1.07
TUBGCP2-203ENST00000368563 SALL2Q9Y467 1007 aaPredicted RBP21.74■■□□□ 1.07
TUBGCP2-203ENST00000368563 HNRNPUQ00839 825 aaKnown RBP eCLIP21.72■■□□□ 1.07
TUBGCP2-203ENST00000368563 FHOD3Q2V2M9 1422 aa21.7■■□□□ 1.06
TUBGCP2-203ENST00000368563 EIF4G2P78344 907 aaKnown RBP eCLIP21.67■■□□□ 1.06
TUBGCP2-203ENST00000368563 NCAPD3P42695 1498 aa21.66■■□□□ 1.06
TUBGCP2-203ENST00000368563 CLSPNQ9HAW4 1339 aa21.65■■□□□ 1.06
TUBGCP2-203ENST00000368563 SENP3-EIF4A1A0A087X0R7 540 aa21.63■■□□□ 1.05
TUBGCP2-203ENST00000368563 FOXD1Q16676 465 aa21.61■■□□□ 1.05
TUBGCP2-203ENST00000368563 RAD54L2Q9Y4B4 1467 aa21.6■■□□□ 1.05
TUBGCP2-203ENST00000368563 DAXXQ9UER7 740 aaPredicted RBP21.59■■□□□ 1.05
TUBGCP2-203ENST00000368563 DNAJC5BQ9UF47 199 aa21.59■■□□□ 1.05
TUBGCP2-203ENST00000368563 IGF1RP08069 1367 aa21.58■■□□□ 1.04
TUBGCP2-203ENST00000368563 BCL11AQ9H165 835 aa21.58■■□□□ 1.04
TUBGCP2-203ENST00000368563 MRS2Q9HD23 443 aa21.58■■□□□ 1.04
TUBGCP2-203ENST00000368563 JPH4Q96JJ6 628 aa21.57■■□□□ 1.04
TUBGCP2-203ENST00000368563 TMC1Q8TDI8 760 aa21.56■■□□□ 1.04
TUBGCP2-203ENST00000368563 SLC24A1O60721 1099 aa21.56■■□□□ 1.04
TUBGCP2-203ENST00000368563 FGD5Q6ZNL6 1462 aa21.56■■□□□ 1.04
TUBGCP2-203ENST00000368563 FKBP8Q14318 412 aa21.54■■□□□ 1.04
TUBGCP2-203ENST00000368563 FMN1Q68DA7 1419 aa21.53■■□□□ 1.04
TUBGCP2-203ENST00000368563 ARHGAP35Q9NRY4 1499 aa21.51■■□□□ 1.03
TUBGCP2-203ENST00000368563 NESP48681 1621 aa21.51■■□□□ 1.03
TUBGCP2-203ENST00000368563 CARMIL2Q6F5E8 1435 aa21.49■■□□□ 1.03
TUBGCP2-203ENST00000368563 RAB3GAP2Q9H2M9 1393 aa21.48■■□□□ 1.03
TUBGCP2-203ENST00000368563 SETD5Q9C0A6 1442 aa21.47■■□□□ 1.03
TUBGCP2-203ENST00000368563 CARD11Q9BXL7 1154 aa21.47■■□□□ 1.03
TUBGCP2-203ENST00000368563 CANXP27824 592 aaKnown RBP21.46■■□□□ 1.03
TUBGCP2-203ENST00000368563 NEFMP07197 916 aa21.43■■□□□ 1.02
TUBGCP2-203ENST00000368563 ARID4BQ4LE39 1312 aaPredicted RBP21.43■■□□□ 1.02
TUBGCP2-203ENST00000368563 BICRAQ9NZM4 1560 aa21.41■■□□□ 1.02
TUBGCP2-203ENST00000368563 DCAF11Q8TEB1 546 aa21.41■■□□□ 1.02
TUBGCP2-203ENST00000368563 AQRO60306 1485 aaKnown RBP eCLIP21.4■■□□□ 1.023e-7■■■■■ 31.5
TUBGCP2-203ENST00000368563 IRX6P78412 446 aaPredicted RBP21.4■■□□□ 1.02
TUBGCP2-203ENST00000368563 PKD2Q13563 968 aa21.4■■□□□ 1.02
TUBGCP2-203ENST00000368563 HNRNPMP52272 730 aaKnown RBP eCLIP21.39■■□□□ 1.017e-7■■■■■ 36
TUBGCP2-203ENST00000368563 GAPVD1Q14C86 1478 aa21.39■■□□□ 1.01
TUBGCP2-203ENST00000368563 CFTRP13569 1480 aa21.38■■□□□ 1.01
TUBGCP2-203ENST00000368563 SYNJ1O43426 1573 aa21.37■■□□□ 1.01
TUBGCP2-203ENST00000368563 PPP1R15AO75807 674 aaPredicted RBP21.36■■□□□ 1.01
TUBGCP2-203ENST00000368563 MLECQ14165 292 aa21.36■■□□□ 1.01
TUBGCP2-203ENST00000368563 PLEKHG5O94827 1062 aa21.35■■□□□ 1.01
TUBGCP2-203ENST00000368563 GGT6Q6P531 493 aa21.35■■□□□ 1.01
TUBGCP2-203ENST00000368563 SCAF1Q9H7N4 1312 aaKnown RBP21.35■■□□□ 1.01
TUBGCP2-203ENST00000368563 MPHOSPH9Q99550 1183 aa21.34■■□□□ 1.01
TUBGCP2-203ENST00000368563 CC2D2AQ9P2K1 1620 aa21.33■■□□□ 1
TUBGCP2-203ENST00000368563 EFCAB2Q5VUJ9 269 aa21.29■■□□□ 1
TUBGCP2-203ENST00000368563 WDR43Q15061 677 aaKnown RBP eCLIP21.28■■□□□ 1
TUBGCP2-203ENST00000368563 NUP155O75694 1391 aa21.27■■□□□ 1
TUBGCP2-203ENST00000368563 TRHP20396 242 aaPredicted RBP21.25■□□□□ 0.99
TUBGCP2-203ENST00000368563 HSPA5P11021 654 aaKnown RBP21.22■□□□□ 0.99
TUBGCP2-203ENST00000368563 PTPRGP23470 1445 aa21.2■□□□□ 0.98
TUBGCP2-203ENST00000368563 L3MBTL2Q969R5 705 aa21.2■□□□□ 0.98
TUBGCP2-203ENST00000368563 ZNF644Q9H582 1327 aaPredicted RBP21.2■□□□□ 0.98
TUBGCP2-203ENST00000368563 CUX1P39880 1505 aa21.19■□□□□ 0.98
TUBGCP2-203ENST00000368563 TIMELESSQ9UNS1 1208 aa21.19■□□□□ 0.98
TUBGCP2-203ENST00000368563 KIF3BO15066 747 aa21.18■□□□□ 0.98
TUBGCP2-203ENST00000368563 KNSTRNQ9Y448 316 aa21.18■□□□□ 0.98
TUBGCP2-203ENST00000368563 KIF21BO75037 1637 aa21.17■□□□□ 0.98
TUBGCP2-203ENST00000368563 TNNT2P45379 298 aaPredicted RBP21.17■□□□□ 0.98
TUBGCP2-203ENST00000368563 SAFB2Q14151 953 aaKnown RBP eCLIP21.17■□□□□ 0.98
TUBGCP2-203ENST00000368563 ZBTB47Q9UFB7 747 aaPredicted RBP21.17■□□□□ 0.98
TUBGCP2-203ENST00000368563 ANKRD30AQ9BXX3 1397 aa21.16■□□□□ 0.98
TUBGCP2-203ENST00000368563 ARAP1Q96P48 1450 aa21.16■□□□□ 0.98
TUBGCP2-203ENST00000368563 CYB5RLQ6IPT4 315 aa21.16■□□□□ 0.98
TUBGCP2-203ENST00000368563 CCDC18Q5T9S5 1454 aa21.16■□□□□ 0.98
TUBGCP2-203ENST00000368563 CC2D1BQ5T0F9 858 aaKnown RBP21.15■□□□□ 0.98
TUBGCP2-203ENST00000368563 HMGXB3Q12766 1538 aa21.15■□□□□ 0.98
TUBGCP2-203ENST00000368563 DHX57Q6P158 1386 aaKnown RBP21.15■□□□□ 0.98
TUBGCP2-203ENST00000368563 PPM1GO15355 546 aaPredicted RBP21.14■□□□□ 0.97
TUBGCP2-203ENST00000368563 NPM2Q86SE8 214 aaKnown RBP21.13■□□□□ 0.97
TUBGCP2-203ENST00000368563 POLA1P09884 1462 aaPredicted RBP21.12■□□□□ 0.97
TUBGCP2-203ENST00000368563 PHLDB1Q86UU1 1377 aa21.12■□□□□ 0.97
TUBGCP2-203ENST00000368563 C14orf37Q86TY3 774 aa21.12■□□□□ 0.97
TUBGCP2-203ENST00000368563 CCDC136Q96JN2 1154 aa21.12■□□□□ 0.97
TUBGCP2-203ENST00000368563 TOPBP1Q92547 1522 aa21.11■□□□□ 0.97
TUBGCP2-203ENST00000368563 POGKQ9P215 609 aa21.11■□□□□ 0.97
TUBGCP2-203ENST00000368563 SPAG9O60271 1321 aaKnown RBP21.09■□□□□ 0.97
TUBGCP2-203ENST00000368563 NEUROD2Q15784 382 aa21.09■□□□□ 0.97
TUBGCP2-203ENST00000368563 SUPT16HQ9Y5B9 1047 aaKnown RBP21.09■□□□□ 0.97
TUBGCP2-203ENST00000368563 KANK1Q14678 1352 aa21.08■□□□□ 0.97
TUBGCP2-203ENST00000368563 ZBTB7CA1YPR0 619 aa21.08■□□□□ 0.97
TUBGCP2-203ENST00000368563 PRXQ9BXM0 1461 aa21.08■□□□□ 0.96
TUBGCP2-203ENST00000368563 CDCA8Q53HL2 280 aa21.07■□□□□ 0.96
TUBGCP2-203ENST00000368563 OSCARQ8IYS5 282 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms