RNA–Protein interactions for RNA: ENST00000368300.8

LMNA-206, Transcript of lamin A/C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNA, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-206ENST00000368300 WDR97A6NE52 1622 aa18.33■□□□□ 0.52
LMNA-206ENST00000368300 CUL7Q14999 1698 aa18.33■□□□□ 0.52
LMNA-206ENST00000368300 RRBP1Q9P2E9 1410 aaKnown RBP18.32■□□□□ 0.52
LMNA-206ENST00000368300 ABCA5Q8WWZ7 1642 aa18.32■□□□□ 0.52
LMNA-206ENST00000368300 FHAD1B1AJZ9 1412 aa18.32■□□□□ 0.52
LMNA-206ENST00000368300 SCAF1Q9H7N4 1312 aaKnown RBP18.32■□□□□ 0.52
LMNA-206ENST00000368300 TIAM1Q13009 1591 aa18.3■□□□□ 0.52
LMNA-206ENST00000368300 MYT1Q01538 1121 aa18.3■□□□□ 0.52
LMNA-206ENST00000368300 FAM50AQ14320 339 aaKnown RBP18.29■□□□□ 0.52
LMNA-206ENST00000368300 LRRC9Q6ZRR7 1453 aa18.29■□□□□ 0.52
LMNA-206ENST00000368300 PCF11O94913 1555 aaKnown RBP18.29■□□□□ 0.52
LMNA-206ENST00000368300 TARBP1Q13395 1621 aaKnown RBP18.28■□□□□ 0.52
LMNA-206ENST00000368300 PHLDB1Q86UU1 1377 aa18.28■□□□□ 0.52
LMNA-206ENST00000368300 MRC2Q9UBG0 1479 aa18.28■□□□□ 0.52
LMNA-206ENST00000368300 DIEXFQ68CQ4 756 aaKnown RBP18.25■□□□□ 0.51
LMNA-206ENST00000368300 DHX57Q6P158 1386 aaKnown RBP18.23■□□□□ 0.51
LMNA-206ENST00000368300 ZNF608Q9ULD9 1512 aaPredicted RBP18.22■□□□□ 0.51
LMNA-206ENST00000368300 CTTNBP2Q8WZ74 1663 aa18.22■□□□□ 0.51
LMNA-206ENST00000368300 EFCAB5A4FU69 1503 aa18.21■□□□□ 0.51
LMNA-206ENST00000368300 MAP3K1Q13233 1512 aa18.21■□□□□ 0.51
LMNA-206ENST00000368300 CASKIN1Q8WXD9 1431 aa18.21■□□□□ 0.51
LMNA-206ENST00000368300 ZNF316A6NFI3 1004 aaPredicted RBP18.2■□□□□ 0.5
LMNA-206ENST00000368300 ARID3CA6NKF2 412 aa18.19■□□□□ 0.5
LMNA-206ENST00000368300 FMN1Q68DA7 1419 aa18.18■□□□□ 0.5
LMNA-206ENST00000368300 ERCC6Q03468 1493 aa18.18■□□□□ 0.5
LMNA-206ENST00000368300 FYCO1Q9BQS8 1478 aa18.18■□□□□ 0.5
LMNA-206ENST00000368300 MTUS2Q5JR59 1369 aa18.13■□□□□ 0.49
LMNA-206ENST00000368300 RAB3GAP2Q9H2M9 1393 aa18.13■□□□□ 0.49
LMNA-206ENST00000368300 GRIN2BQ13224 1484 aa18.13■□□□□ 0.49
LMNA-206ENST00000368300 SNAPC4Q5SXM2 1469 aa18.13■□□□□ 0.49
LMNA-206ENST00000368300 IFT140Q96RY7 1462 aa18.11■□□□□ 0.49
LMNA-206ENST00000368300 CFAP43Q8NDM7 1665 aa18.11■□□□□ 0.49
LMNA-206ENST00000368300 PBRM1Q86U86 1689 aa18.11■□□□□ 0.49
LMNA-206ENST00000368300 FBLN2P98095 1184 aa18.1■□□□□ 0.49
LMNA-206ENST00000368300 SAMD9Q5K651 1589 aa18.09■□□□□ 0.49
LMNA-206ENST00000368300 WDR62O43379 1518 aa18.09■□□□□ 0.49
LMNA-206ENST00000368300 ADAMTS12P58397 1594 aa18.07■□□□□ 0.48
LMNA-206ENST00000368300 CLSPNQ9HAW4 1339 aa18.05■□□□□ 0.48
LMNA-206ENST00000368300 SETD5Q9C0A6 1442 aa18.05■□□□□ 0.48
LMNA-206ENST00000368300 IQGAP2Q13576 1575 aa18.03■□□□□ 0.48
LMNA-206ENST00000368300 CHMP7Q8WUX9 453 aaPredicted RBP18.02■□□□□ 0.48
LMNA-206ENST00000368300 FGD6Q6ZV73 1430 aa18■□□□□ 0.47
LMNA-206ENST00000368300 LRRIQ1Q96JM4 1722 aa17.99■□□□□ 0.47
LMNA-206ENST00000368300 NEUROD1Q13562 356 aa17.99■□□□□ 0.47
LMNA-206ENST00000368300 SIN3AQ96ST3 1273 aa17.99■□□□□ 0.47
LMNA-206ENST00000368300 NCOA2Q15596 1464 aa17.98■□□□□ 0.47
LMNA-206ENST00000368300 EIF4G3O43432 1585 aaKnown RBP17.97■□□□□ 0.47
LMNA-206ENST00000368300 MAGI3Q5TCQ9 1506 aa17.96■□□□□ 0.46
LMNA-206ENST00000368300 PTPRKQ15262 1439 aa17.95■□□□□ 0.46
LMNA-206ENST00000368300 GRIN2AQ12879 1464 aa17.95■□□□□ 0.46
LMNA-206ENST00000368300 MIER1Q8N108 512 aa17.94■□□□□ 0.46
LMNA-206ENST00000368300 CDK13Q14004 1512 aaKnown RBP17.94■□□□□ 0.46
LMNA-206ENST00000368300 CHIC2Q9UKJ5 165 aa17.93■□□□□ 0.46
LMNA-206ENST00000368300 KIAA0586Q9BVV6 1533 aa17.93■□□□□ 0.46
LMNA-206ENST00000368300 THOC2Q8NI27 1593 aaKnown RBP17.93■□□□□ 0.46
LMNA-206ENST00000368300 MAPKBP1O60336 1514 aa17.93■□□□□ 0.46
LMNA-206ENST00000368300 MYOM3Q5VTT5 1437 aa17.92■□□□□ 0.46
LMNA-206ENST00000368300 EPRSP07814 1512 aaKnown RBP17.91■□□□□ 0.46
LMNA-206ENST00000368300 DISP1Q96F81 1524 aa17.9■□□□□ 0.46
LMNA-206ENST00000368300 UGGT2Q9NYU1 1516 aa17.9■□□□□ 0.46
LMNA-206ENST00000368300 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.9■□□□□ 0.46
LMNA-206ENST00000368300 RRP7BPQ9NSQ0 103 aa17.89■□□□□ 0.45
LMNA-206ENST00000368300 YTHDC1Q96MU7 727 aaKnown RBP17.88■□□□□ 0.45
LMNA-206ENST00000368300 EHBP1L1Q8N3D4 1523 aa17.88■□□□□ 0.45
LMNA-206ENST00000368300 CCDC18Q5T9S5 1454 aa17.87■□□□□ 0.45
LMNA-206ENST00000368300 JPH4Q96JJ6 628 aa17.86■□□□□ 0.45
LMNA-206ENST00000368300 HECW1Q76N89 1606 aa17.86■□□□□ 0.45
LMNA-206ENST00000368300 SUPT6HQ7KZ85 1726 aaKnown RBP17.85■□□□□ 0.45
LMNA-206ENST00000368300 MAGI1Q96QZ7 1491 aaPredicted RBP17.85■□□□□ 0.45
LMNA-206ENST00000368300 SYNJ2O15056 1496 aa17.84■□□□□ 0.45
LMNA-206ENST00000368300 KIAA0556O60303 1618 aa17.82■□□□□ 0.44
LMNA-206ENST00000368300 CEP170Q5SW79 1584 aa17.82■□□□□ 0.44
LMNA-206ENST00000368300 ZNF644Q9H582 1327 aaPredicted RBP17.8■□□□□ 0.44
LMNA-206ENST00000368300 NUP153P49790 1475 aaKnown RBP17.8■□□□□ 0.44
LMNA-206ENST00000368300 ACIN1Q9UKV3 1341 aaKnown RBP17.79■□□□□ 0.44
LMNA-206ENST00000368300 ARHGEF11O15085 1522 aa17.79■□□□□ 0.44
LMNA-206ENST00000368300 NAIPQ13075 1403 aa17.79■□□□□ 0.44
LMNA-206ENST00000368300 PTPN23Q9H3S7 1636 aa17.79■□□□□ 0.44
LMNA-206ENST00000368300 HFM1A2PYH4 1435 aa17.79■□□□□ 0.44
LMNA-206ENST00000368300 PLB1Q6P1J6 1458 aa17.79■□□□□ 0.44
LMNA-206ENST00000368300 TRIM52Q96A61 297 aa17.76■□□□□ 0.43
LMNA-206ENST00000368300 PRG4Q92954 1404 aaPredicted RBP17.75■□□□□ 0.43
LMNA-206ENST00000368300 HIRIP3Q9BW71 556 aaPredicted RBP17.75■□□□□ 0.43
LMNA-206ENST00000368300 CDK11AQ9UQ88 783 aaPredicted RBP17.75■□□□□ 0.43
LMNA-206ENST00000368300 NUP160Q12769 1436 aa17.74■□□□□ 0.43
LMNA-206ENST00000368300 CENPBP07199 599 aaPredicted RBP17.73■□□□□ 0.43
LMNA-206ENST00000368300 ZNF777Q9ULD5 760 aaPredicted RBP17.72■□□□□ 0.43
LMNA-206ENST00000368300 RAPGEF6Q8TEU7 1601 aa17.71■□□□□ 0.43
LMNA-206ENST00000368300 CARMIL2Q6F5E8 1435 aa17.71■□□□□ 0.43
LMNA-206ENST00000368300 UACAQ9BZF9 1416 aa17.71■□□□□ 0.43
LMNA-206ENST00000368300 TCOF1Q13428 1488 aaKnown RBP17.7■□□□□ 0.42
LMNA-206ENST00000368300 PPP1R15AO75807 674 aaPredicted RBP17.69■□□□□ 0.42
LMNA-206ENST00000368300 GTF3C3Q9Y5Q9 886 aa17.69■□□□□ 0.42
LMNA-206ENST00000368300 MIA2Q96PC5 1412 aa17.69■□□□□ 0.42
LMNA-206ENST00000368300 FOXD1Q16676 465 aa17.68■□□□□ 0.42
LMNA-206ENST00000368300 CFDP1Q9UEE9 299 aaPredicted RBP17.67■□□□□ 0.42
LMNA-206ENST00000368300 TONSLQ96HA7 1378 aa17.66■□□□□ 0.42
LMNA-206ENST00000368300 TROQ12816 1431 aaPredicted RBP17.64■□□□□ 0.41
LMNA-206ENST00000368300 KDM6BO15054 1643 aa17.64■□□□□ 0.41
LMNA-206ENST00000368300 PLEKHD1A6NEE1 506 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms