RNA–Protein interactions for RNA: ENST00000368297.5

LMNA-203, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-203ENST00000368297 RANGAP1P46060 587 aaPredicted RBP25.41■■□□□ 1.66
LMNA-203ENST00000368297 CHD1O14646 1710 aa25.36■■□□□ 1.65
LMNA-203ENST00000368297 CLIP1P30622 1438 aa25.36■■□□□ 1.65
LMNA-203ENST00000368297 CEP170Q5SW79 1584 aa25.29■■□□□ 1.64
LMNA-203ENST00000368297 IQGAP2Q13576 1575 aa25.27■■□□□ 1.64
LMNA-203ENST00000368297 NUP160Q12769 1436 aa25.25■■□□□ 1.63
LMNA-203ENST00000368297 KIAA0586Q9BVV6 1533 aa25.25■■□□□ 1.63
LMNA-203ENST00000368297 ARHGAP35Q9NRY4 1499 aa25.19■■□□□ 1.62
LMNA-203ENST00000368297 EFCAB5A4FU69 1503 aa25.17■■□□□ 1.62
LMNA-203ENST00000368297 ARAP1Q96P48 1450 aa25.13■■□□□ 1.61
LMNA-203ENST00000368297 P3H3Q8IVL6 736 aa25.12■■□□□ 1.61
LMNA-203ENST00000368297 UGGT2Q9NYU1 1516 aa25.12■■□□□ 1.61
LMNA-203ENST00000368297 SAMD9Q5K651 1589 aa25.12■■□□□ 1.61
LMNA-203ENST00000368297 FHOD3Q2V2M9 1422 aa25.06■■□□□ 1.6
LMNA-203ENST00000368297 VPS8Q8N3P4 1428 aa25.06■■□□□ 1.6
LMNA-203ENST00000368297 JPH4Q96JJ6 628 aa25.05■■□□□ 1.6
LMNA-203ENST00000368297 CLASP1Q7Z460 1538 aa25.02■■□□□ 1.6
LMNA-203ENST00000368297 KIAA0556O60303 1618 aa25.01■■□□□ 1.59
LMNA-203ENST00000368297 DISP1Q96F81 1524 aa25■■□□□ 1.59
LMNA-203ENST00000368297 CARMIL2Q6F5E8 1435 aa24.98■■□□□ 1.59
LMNA-203ENST00000368297 SHROOM2Q13796 1616 aa24.97■■□□□ 1.59
LMNA-203ENST00000368297 OSCARQ8IYS5 282 aa24.96■■□□□ 1.59
LMNA-203ENST00000368297 PRG4Q92954 1404 aaPredicted RBP24.94■■□□□ 1.58
LMNA-203ENST00000368297 FMN1Q68DA7 1419 aa24.93■■□□□ 1.58
LMNA-203ENST00000368297 TTBK1Q5TCY1 1321 aaPredicted RBP24.89■■□□□ 1.57
LMNA-203ENST00000368297 PCF11O94913 1555 aaKnown RBP24.88■■□□□ 1.57
LMNA-203ENST00000368297 APLP2Q06481 763 aa24.87■■□□□ 1.57
LMNA-203ENST00000368297 ATP1B4Q9UN42 357 aaPredicted RBP24.85■■□□□ 1.57
LMNA-203ENST00000368297 CASKIN1Q8WXD9 1431 aa24.83■■□□□ 1.57
LMNA-203ENST00000368297 FYCO1Q9BQS8 1478 aa24.83■■□□□ 1.56
LMNA-203ENST00000368297 ERCC6L2Q5T890 1561 aa24.81■■□□□ 1.56
LMNA-203ENST00000368297 PPARGC1BQ86YN6 1023 aaKnown RBP24.78■■□□□ 1.56
LMNA-203ENST00000368297 PTPRGP23470 1445 aa24.75■■□□□ 1.55
LMNA-203ENST00000368297 HECW1Q76N89 1606 aa24.74■■□□□ 1.55
LMNA-203ENST00000368297 RAPGEF6Q8TEU7 1601 aa24.74■■□□□ 1.55
LMNA-203ENST00000368297 TIAM1Q13009 1591 aa24.7■■□□□ 1.54
LMNA-203ENST00000368297 CFAP43Q8NDM7 1665 aa24.69■■□□□ 1.54
LMNA-203ENST00000368297 PLB1Q6P1J6 1458 aa24.69■■□□□ 1.54
LMNA-203ENST00000368297 LRRIQ1Q96JM4 1722 aa24.68■■□□□ 1.54
LMNA-203ENST00000368297 MAP3K1Q13233 1512 aa24.68■■□□□ 1.54
LMNA-203ENST00000368297 ABCA8O94911 1581 aa24.66■■□□□ 1.54
LMNA-203ENST00000368297 CCDC18Q5T9S5 1454 aa24.65■■□□□ 1.54
LMNA-203ENST00000368297 EPRSP07814 1512 aaKnown RBP24.62■■□□□ 1.53
LMNA-203ENST00000368297 NUP153P49790 1475 aaKnown RBP24.62■■□□□ 1.53
LMNA-203ENST00000368297 ARID3CA6NKF2 412 aa24.62■■□□□ 1.53
LMNA-203ENST00000368297 KANK4Q5T7N3 995 aaPredicted RBP24.61■■□□□ 1.53
LMNA-203ENST00000368297 UACAQ9BZF9 1416 aa24.59■■□□□ 1.53
LMNA-203ENST00000368297 CDK13Q14004 1512 aaKnown RBP24.59■■□□□ 1.53
LMNA-203ENST00000368297 LRRC9Q6ZRR7 1453 aa24.57■■□□□ 1.52
LMNA-203ENST00000368297 ARHGEF11O15085 1522 aa24.56■■□□□ 1.52
LMNA-203ENST00000368297 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.56■■□□□ 1.52
LMNA-203ENST00000368297 HNRNPUL2Q1KMD3 747 aaKnown RBP24.56■■□□□ 1.52
LMNA-203ENST00000368297 ABCC2Q92887 1545 aa24.54■■□□□ 1.52
LMNA-203ENST00000368297 MTUS2Q5JR59 1369 aa24.52■■□□□ 1.52
LMNA-203ENST00000368297 UHRF1BP1LA0JNW5 1464 aa24.48■■□□□ 1.51
LMNA-203ENST00000368297 EHBP1L1Q8N3D4 1523 aa24.48■■□□□ 1.51
LMNA-203ENST00000368297 RIMBP3CA6NJZ7 1639 aa24.48■■□□□ 1.51
LMNA-203ENST00000368297 RIMBP3BA6NNM3 1639 aa24.48■■□□□ 1.51
LMNA-203ENST00000368297 RIMBP3Q9UFD9 1639 aa24.48■■□□□ 1.51
LMNA-203ENST00000368297 ATP10BO94823 1461 aa24.48■■□□□ 1.51
LMNA-203ENST00000368297 TRIM26Q12899 539 aaPredicted RBP24.46■■□□□ 1.51
LMNA-203ENST00000368297 CDK11AQ9UQ88 783 aaPredicted RBP24.46■■□□□ 1.51
LMNA-203ENST00000368297 MAGI3Q5TCQ9 1506 aa24.46■■□□□ 1.51
LMNA-203ENST00000368297 PCGF6Q9BYE7 350 aa24.43■■□□□ 1.5
LMNA-203ENST00000368297 ADCY10Q96PN6 1610 aa24.43■■□□□ 1.5
LMNA-203ENST00000368297 SUPT6HQ7KZ85 1726 aaKnown RBP24.41■■□□□ 1.5
LMNA-203ENST00000368297 ZCCHC11Q5TAX3 1644 aaKnown RBP24.39■■□□□ 1.5
LMNA-203ENST00000368297 KDM5BQ9UGL1 1544 aa24.37■■□□□ 1.49
LMNA-203ENST00000368297 PLEKHD1A6NEE1 506 aa24.37■■□□□ 1.49
LMNA-203ENST00000368297 TROQ12816 1431 aaPredicted RBP24.37■■□□□ 1.49
LMNA-203ENST00000368297 NCOA2Q15596 1464 aa24.35■■□□□ 1.49
LMNA-203ENST00000368297 CYB5RLQ6IPT4 315 aa24.33■■□□□ 1.49
LMNA-203ENST00000368297 PHLDB1Q86UU1 1377 aa24.31■■□□□ 1.48
LMNA-203ENST00000368297 NPM1P06748 294 aaKnown RBP eCLIP24.3■■□□□ 1.48
LMNA-203ENST00000368297 KIF14Q15058 1648 aa24.28■■□□□ 1.48
LMNA-203ENST00000368297 RRBP1Q9P2E9 1410 aaKnown RBP24.23■■□□□ 1.47
LMNA-203ENST00000368297 MYOM3Q5VTT5 1437 aa24.22■■□□□ 1.47
LMNA-203ENST00000368297 CCNB3Q8WWL7 1395 aa24.21■■□□□ 1.47
LMNA-203ENST00000368297 FGD6Q6ZV73 1430 aa24.18■■□□□ 1.46
LMNA-203ENST00000368297 KCNH8Q96L42 1107 aa24.18■■□□□ 1.46
LMNA-203ENST00000368297 WDR7Q9Y4E6 1490 aa24.18■■□□□ 1.46
LMNA-203ENST00000368297 ASXL2Q76L83 1435 aa24.17■■□□□ 1.46
LMNA-203ENST00000368297 ITSN2Q9NZM3 1697 aa24.16■■□□□ 1.46
LMNA-203ENST00000368297 ABCC10Q5T3U5 1492 aa24.15■■□□□ 1.46
LMNA-203ENST00000368297 FAM50AQ14320 339 aaKnown RBP24.15■■□□□ 1.46
LMNA-203ENST00000368297 PTPN23Q9H3S7 1636 aa24.12■■□□□ 1.45
LMNA-203ENST00000368297 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.11■■□□□ 1.459e-7■■□□□ 11.4
LMNA-203ENST00000368297 MIA2Q96PC5 1412 aa24.11■■□□□ 1.45
LMNA-203ENST00000368297 CDC42BPAQ5VT25 1732 aa24.11■■□□□ 1.45
LMNA-203ENST00000368297 GPATCH8Q9UKJ3 1502 aaKnown RBP24.11■■□□□ 1.45
LMNA-203ENST00000368297 TTC37Q6PGP7 1564 aa24.11■■□□□ 1.45
LMNA-203ENST00000368297 MAPKBP1O60336 1514 aa24.07■■□□□ 1.44
LMNA-203ENST00000368297 CFDP1Q9UEE9 299 aaPredicted RBP24.07■■□□□ 1.44
LMNA-203ENST00000368297 MYO5CQ9NQX4 1742 aa24.06■■□□□ 1.44
LMNA-203ENST00000368297 ITGAEP38570 1179 aa24.05■■□□□ 1.44
LMNA-203ENST00000368297 PREX2Q70Z35 1606 aa24.05■■□□□ 1.44
LMNA-203ENST00000368297 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.05■■□□□ 1.44
LMNA-203ENST00000368297 TCOF1Q13428 1488 aaKnown RBP24.04■■□□□ 1.44
LMNA-203ENST00000368297 ZNF777Q9ULD5 760 aaPredicted RBP24.02■■□□□ 1.44
LMNA-203ENST00000368297 CDC42BPBQ9Y5S2 1711 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms