RNA–Protein interactions for RNA: ENST00000367402.6

NUP43-202, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-202ENST00000367402 SYNJ2O15056 1496 aa16.61■□□□□ 0.25
NUP43-202ENST00000367402 ERICH3Q5RHP9 1530 aa16.6■□□□□ 0.25
NUP43-202ENST00000367402 IGF1RP08069 1367 aa16.6■□□□□ 0.25
NUP43-202ENST00000367402 C1QBPQ07021 282 aaKnown RBP16.58■□□□□ 0.24
NUP43-202ENST00000367402 FHAD1B1AJZ9 1412 aa16.58■□□□□ 0.24
NUP43-202ENST00000367402 CHD1O14646 1710 aa16.55■□□□□ 0.24
NUP43-202ENST00000367402 RUSC2Q8N2Y8 1516 aa16.55■□□□□ 0.24
NUP43-202ENST00000367402 ADAMTS12P58397 1594 aa16.53■□□□□ 0.24
NUP43-202ENST00000367402 GRIN2AQ12879 1464 aa16.51■□□□□ 0.23
NUP43-202ENST00000367402 NCBP3Q53F19 620 aaKnown RBP16.51■□□□□ 0.23
NUP43-202ENST00000367402 CARMIL1Q5VZK9 1371 aa16.51■□□□□ 0.23
NUP43-202ENST00000367402 FAM9AQ8IZU1 332 aaPredicted RBP16.46■□□□□ 0.23
NUP43-202ENST00000367402 CUL7Q14999 1698 aa16.44■□□□□ 0.22
NUP43-202ENST00000367402 CSRNP3Q8WYN3 585 aa16.44■□□□□ 0.22
NUP43-202ENST00000367402 NUP160Q12769 1436 aa16.43■□□□□ 0.22
NUP43-202ENST00000367402 CLASP1Q7Z460 1538 aa16.4■□□□□ 0.22
NUP43-202ENST00000367402 CEP170Q5SW79 1584 aa16.4■□□□□ 0.22
NUP43-202ENST00000367402 EEA1Q15075 1411 aa16.4■□□□□ 0.22
NUP43-202ENST00000367402 RAPGEF2Q9Y4G8 1499 aa16.39■□□□□ 0.21
NUP43-202ENST00000367402 PRXQ9BXM0 1461 aa16.35■□□□□ 0.21
NUP43-202ENST00000367402 ARHGEF11O15085 1522 aa16.35■□□□□ 0.21
NUP43-202ENST00000367402 JPH4Q96JJ6 628 aa16.34■□□□□ 0.21
NUP43-202ENST00000367402 KIAA0586Q9BVV6 1533 aa16.32■□□□□ 0.2
NUP43-202ENST00000367402 RIMBP3CA6NJZ7 1639 aa16.31■□□□□ 0.2
NUP43-202ENST00000367402 RIMBP3BA6NNM3 1639 aa16.31■□□□□ 0.2
NUP43-202ENST00000367402 RIMBP3Q9UFD9 1639 aa16.31■□□□□ 0.2
NUP43-202ENST00000367402 CYB5RLQ6IPT4 315 aa16.3■□□□□ 0.2
NUP43-202ENST00000367402 PRG4Q92954 1404 aaPredicted RBP16.28■□□□□ 0.2
NUP43-202ENST00000367402 EHMT2Q96KQ7 1210 aa16.27■□□□□ 0.2
NUP43-202ENST00000367402 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.26■□□□□ 0.192e-7■□□□□ 8
NUP43-202ENST00000367402 SHROOM2Q13796 1616 aa16.23■□□□□ 0.19
NUP43-202ENST00000367402 ARAP1Q96P48 1450 aa16.22■□□□□ 0.19
NUP43-202ENST00000367402 ERCC6L2Q5T890 1561 aa16.22■□□□□ 0.19
NUP43-202ENST00000367402 IQGAP2Q13576 1575 aa16.21■□□□□ 0.18
NUP43-202ENST00000367402 UBTFP17480 764 aaKnown RBP16.19■□□□□ 0.18
NUP43-202ENST00000367402 CARMIL2Q6F5E8 1435 aa16.18■□□□□ 0.18
NUP43-202ENST00000367402 KIF21BO75037 1637 aa16.17■□□□□ 0.18
NUP43-202ENST00000367402 TTBK1Q5TCY1 1321 aaPredicted RBP16.17■□□□□ 0.18
NUP43-202ENST00000367402 RANGAP1P46060 587 aaPredicted RBP16.16■□□□□ 0.18
NUP43-202ENST00000367402 NPM3O75607 178 aaKnown RBP16.14■□□□□ 0.17
NUP43-202ENST00000367402 GOLGA3Q08378 1498 aa16.14■□□□□ 0.17
NUP43-202ENST00000367402 UGGT2Q9NYU1 1516 aa16.13■□□□□ 0.17
NUP43-202ENST00000367402 CTTNBP2Q8WZ74 1663 aa16.12■□□□□ 0.17
NUP43-202ENST00000367402 TNIKQ9UKE5 1360 aa16.11■□□□□ 0.17
NUP43-202ENST00000367402 PTPRGP23470 1445 aa16.11■□□□□ 0.17
NUP43-202ENST00000367402 DISP1Q96F81 1524 aa16.1■□□□□ 0.17
NUP43-202ENST00000367402 P3H3Q8IVL6 736 aa16.09■□□□□ 0.17
NUP43-202ENST00000367402 KIAA0556O60303 1618 aa16.05■□□□□ 0.16
NUP43-202ENST00000367402 NPM1P06748 294 aaKnown RBP eCLIP16.02■□□□□ 0.16
NUP43-202ENST00000367402 LOC105371045A0A1W2PR82 267 aa15.99■□□□□ 0.15
NUP43-202ENST00000367402 UACAQ9BZF9 1416 aa15.98■□□□□ 0.15
NUP43-202ENST00000367402 SAMD9Q5K651 1589 aa15.96■□□□□ 0.15
NUP43-202ENST00000367402 FHOD3Q2V2M9 1422 aa15.95■□□□□ 0.14
NUP43-202ENST00000367402 TRHP20396 242 aaPredicted RBP15.95■□□□□ 0.14
NUP43-202ENST00000367402 ADCY10Q96PN6 1610 aa15.94■□□□□ 0.14
NUP43-202ENST00000367402 EFCAB5A4FU69 1503 aa15.94■□□□□ 0.14
NUP43-202ENST00000367402 PLB1Q6P1J6 1458 aa15.93■□□□□ 0.14
NUP43-202ENST00000367402 UHRF1BP1LA0JNW5 1464 aa15.91■□□□□ 0.14
NUP43-202ENST00000367402 ABCC2Q92887 1545 aa15.91■□□□□ 0.14
NUP43-202ENST00000367402 ARHGAP35Q9NRY4 1499 aa15.91■□□□□ 0.14
NUP43-202ENST00000367402 ARID3CA6NKF2 412 aa15.89■□□□□ 0.13
NUP43-202ENST00000367402 CLIP1P30622 1438 aa15.88■□□□□ 0.13
NUP43-202ENST00000367402 ABCA8O94911 1581 aa15.87■□□□□ 0.13
NUP43-202ENST00000367402 ATP1B4Q9UN42 357 aaPredicted RBP15.86■□□□□ 0.13
NUP43-202ENST00000367402 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.85■□□□□ 0.13
NUP43-202ENST00000367402 HNRNPUL2Q1KMD3 747 aaKnown RBP15.85■□□□□ 0.13
NUP43-202ENST00000367402 KDM5BQ9UGL1 1544 aa15.84■□□□□ 0.13
NUP43-202ENST00000367402 FMN1Q68DA7 1419 aa15.84■□□□□ 0.13
NUP43-202ENST00000367402 FAM69CQ0P6D2 419 aa15.82■□□□□ 0.12
NUP43-202ENST00000367402 CEP162Q5TB80 1403 aa15.82■□□□□ 0.12
NUP43-202ENST00000367402 MAPKBP1O60336 1514 aa15.82■□□□□ 0.12
NUP43-202ENST00000367402 ASXL2Q76L83 1435 aa15.81■□□□□ 0.12
NUP43-202ENST00000367402 RAPGEF6Q8TEU7 1601 aa15.81■□□□□ 0.12
NUP43-202ENST00000367402 U3KPZ7 1027 aaPredicted RBP15.8■□□□□ 0.12
NUP43-202ENST00000367402 ATP10BO94823 1461 aa15.78■□□□□ 0.12
NUP43-202ENST00000367402 NUP153P49790 1475 aaKnown RBP15.78■□□□□ 0.12
NUP43-202ENST00000367402 ZCCHC11Q5TAX3 1644 aaKnown RBP15.78■□□□□ 0.12
NUP43-202ENST00000367402 KCNH8Q96L42 1107 aa15.77■□□□□ 0.12
NUP43-202ENST00000367402 ABCC10Q5T3U5 1492 aa15.77■□□□□ 0.11
NUP43-202ENST00000367402 WDR7Q9Y4E6 1490 aa15.73■□□□□ 0.11
NUP43-202ENST00000367402 PLEKHD1A6NEE1 506 aa15.73■□□□□ 0.11
NUP43-202ENST00000367402 CASKIN1Q8WXD9 1431 aa15.72■□□□□ 0.11
NUP43-202ENST00000367402 CAPN15O75808 1086 aa15.72■□□□□ 0.11
NUP43-202ENST00000367402 EPRSP07814 1512 aaKnown RBP15.7■□□□□ 0.1
NUP43-202ENST00000367402 HECW1Q76N89 1606 aa15.7■□□□□ 0.1
NUP43-202ENST00000367402 DIP2BQ9P265 1576 aa15.7■□□□□ 0.1
NUP43-202ENST00000367402 CDK11AQ9UQ88 783 aaPredicted RBP15.69■□□□□ 0.1
NUP43-202ENST00000367402 CDK13Q14004 1512 aaKnown RBP15.68■□□□□ 0.1
NUP43-202ENST00000367402 PCF11O94913 1555 aaKnown RBP15.67■□□□□ 0.1
NUP43-202ENST00000367402 FYCO1Q9BQS8 1478 aa15.66■□□□□ 0.1
NUP43-202ENST00000367402 KIF13AQ9H1H9 1805 aa15.64■□□□□ 0.09
NUP43-202ENST00000367402 GLI2P10070 1586 aa15.64■□□□□ 0.09
NUP43-202ENST00000367402 SPINK5Q9NQ38 1064 aaPredicted RBP15.64■□□□□ 0.09
NUP43-202ENST00000367402 CCDC18Q5T9S5 1454 aa15.63■□□□□ 0.09
NUP43-202ENST00000367402 DSG3P32926 999 aa15.62■□□□□ 0.09
NUP43-202ENST00000367402 CD109Q6YHK3 1445 aa15.61■□□□□ 0.09
NUP43-202ENST00000367402 VPS8Q8N3P4 1428 aa15.61■□□□□ 0.09
NUP43-202ENST00000367402 KCNA4P22459 653 aa15.59■□□□□ 0.09
NUP43-202ENST00000367402 TROQ12816 1431 aaPredicted RBP15.58■□□□□ 0.08
NUP43-202ENST00000367402 LRRIQ1Q96JM4 1722 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms