RNA–Protein interactions for RNA: ENST00000366860.9

CNIH4-204, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 3

Gene CNIH4, Length 912 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-204ENST00000366860 FBLN2P98095 1184 aa25.48■■□□□ 1.67
CNIH4-204ENST00000366860 IQGAP2Q13576 1575 aa25.42■■□□□ 1.66
CNIH4-204ENST00000366860 KIAA0586Q9BVV6 1533 aa25.39■■□□□ 1.66
CNIH4-204ENST00000366860 CLASP1Q7Z460 1538 aa25.38■■□□□ 1.65
CNIH4-204ENST00000366860 TNIKQ9UKE5 1360 aa25.38■■□□□ 1.65
CNIH4-204ENST00000366860 UBTFP17480 764 aaKnown RBP25.37■■□□□ 1.65
CNIH4-204ENST00000366860 EHMT2Q96KQ7 1210 aa25.34■■□□□ 1.65
CNIH4-204ENST00000366860 SHROOM2Q13796 1616 aa25.3■■□□□ 1.64
CNIH4-204ENST00000366860 LOC105371045A0A1W2PR82 267 aa25.27■■□□□ 1.64
CNIH4-204ENST00000366860 UGGT2Q9NYU1 1516 aa25.27■■□□□ 1.64
CNIH4-204ENST00000366860 OSCARQ8IYS5 282 aa25.26■■□□□ 1.63
CNIH4-204ENST00000366860 EFCAB5A4FU69 1503 aa25.26■■□□□ 1.63
CNIH4-204ENST00000366860 PLPPR3Q6T4P5 718 aa25.22■■□□□ 1.63
CNIH4-204ENST00000366860 SAMD9Q5K651 1589 aa25.22■■□□□ 1.63
CNIH4-204ENST00000366860 CEP162Q5TB80 1403 aa25.2■■□□□ 1.63
CNIH4-204ENST00000366860 KIAA0556O60303 1618 aa25.17■■□□□ 1.62
CNIH4-204ENST00000366860 CLIP1P30622 1438 aa25.16■■□□□ 1.62
CNIH4-204ENST00000366860 CARMIL2Q6F5E8 1435 aa25.12■■□□□ 1.61
CNIH4-204ENST00000366860 JPH4Q96JJ6 628 aa25.1■■□□□ 1.61
CNIH4-204ENST00000366860 DISP1Q96F81 1524 aa25.1■■□□□ 1.61
CNIH4-204ENST00000366860 ARHGAP35Q9NRY4 1499 aa25.09■■□□□ 1.61
CNIH4-204ENST00000366860 PRG4Q92954 1404 aaPredicted RBP25.08■■□□□ 1.61
CNIH4-204ENST00000366860 RANGAP1P46060 587 aaPredicted RBP25.02■■□□□ 1.6
CNIH4-204ENST00000366860 ERCC6L2Q5T890 1561 aa24.99■■□□□ 1.59
CNIH4-204ENST00000366860 ARAP1Q96P48 1450 aa24.99■■□□□ 1.59
CNIH4-204ENST00000366860 FHOD3Q2V2M9 1422 aa24.98■■□□□ 1.59
CNIH4-204ENST00000366860 ARHGEF11O15085 1522 aa24.97■■□□□ 1.59
CNIH4-204ENST00000366860 FMN1Q68DA7 1419 aa24.95■■□□□ 1.58
CNIH4-204ENST00000366860 RIMBP3CA6NJZ7 1639 aa24.92■■□□□ 1.58
CNIH4-204ENST00000366860 RIMBP3BA6NNM3 1639 aa24.92■■□□□ 1.58
CNIH4-204ENST00000366860 RIMBP3Q9UFD9 1639 aa24.92■■□□□ 1.58
CNIH4-204ENST00000366860 VPS8Q8N3P4 1428 aa24.88■■□□□ 1.57
CNIH4-204ENST00000366860 PCF11O94913 1555 aaKnown RBP24.86■■□□□ 1.57
CNIH4-204ENST00000366860 P3H3Q8IVL6 736 aa24.86■■□□□ 1.57
CNIH4-204ENST00000366860 PTPRGP23470 1445 aa24.86■■□□□ 1.57
CNIH4-204ENST00000366860 RAPGEF6Q8TEU7 1601 aa24.85■■□□□ 1.57
CNIH4-204ENST00000366860 HECW1Q76N89 1606 aa24.83■■□□□ 1.57
CNIH4-204ENST00000366860 FYCO1Q9BQS8 1478 aa24.83■■□□□ 1.56
CNIH4-204ENST00000366860 ABCA8O94911 1581 aa24.81■■□□□ 1.56
CNIH4-204ENST00000366860 CASKIN1Q8WXD9 1431 aa24.78■■□□□ 1.56
CNIH4-204ENST00000366860 ABCC2Q92887 1545 aa24.76■■□□□ 1.55
CNIH4-204ENST00000366860 UACAQ9BZF9 1416 aa24.75■■□□□ 1.55
CNIH4-204ENST00000366860 PLB1Q6P1J6 1458 aa24.75■■□□□ 1.55
CNIH4-204ENST00000366860 UHRF1BP1LA0JNW5 1464 aa24.74■■□□□ 1.55
CNIH4-204ENST00000366860 TTBK1Q5TCY1 1321 aaPredicted RBP24.71■■□□□ 1.55
CNIH4-204ENST00000366860 CCDC18Q5T9S5 1454 aa24.7■■□□□ 1.55
CNIH4-204ENST00000366860 CFAP43Q8NDM7 1665 aa24.7■■□□□ 1.54
CNIH4-204ENST00000366860 ADCY10Q96PN6 1610 aa24.7■■□□□ 1.54
CNIH4-204ENST00000366860 LRRIQ1Q96JM4 1722 aa24.68■■□□□ 1.54
CNIH4-204ENST00000366860 NUP153P49790 1475 aaKnown RBP24.68■■□□□ 1.54
CNIH4-204ENST00000366860 DNAJC5Q9H3Z4 198 aa24.64■■□□□ 1.54
CNIH4-204ENST00000366860 EPRSP07814 1512 aaKnown RBP24.63■■□□□ 1.53
CNIH4-204ENST00000366860 MAP3K1Q13233 1512 aa24.63■■□□□ 1.53
CNIH4-204ENST00000366860 TIAM1Q13009 1591 aa24.62■■□□□ 1.53
CNIH4-204ENST00000366860 ZCCHC11Q5TAX3 1644 aaKnown RBP24.61■■□□□ 1.53
CNIH4-204ENST00000366860 FOXD1Q16676 465 aa24.6■■□□□ 1.53
CNIH4-204ENST00000366860 KDM5BQ9UGL1 1544 aa24.6■■□□□ 1.53
CNIH4-204ENST00000366860 CDK13Q14004 1512 aaKnown RBP24.56■■□□□ 1.52
CNIH4-204ENST00000366860 ATP1B4Q9UN42 357 aaPredicted RBP24.55■■□□□ 1.52
CNIH4-204ENST00000366860 APLP2Q06481 763 aa24.54■■□□□ 1.52
CNIH4-204ENST00000366860 CYB5RLQ6IPT4 315 aa24.53■■□□□ 1.52
CNIH4-204ENST00000366860 ATP10BO94823 1461 aa24.51■■□□□ 1.51
CNIH4-204ENST00000366860 EHBP1L1Q8N3D4 1523 aa24.51■■□□□ 1.51
CNIH4-204ENST00000366860 MAPKBP1O60336 1514 aa24.46■■□□□ 1.51
CNIH4-204ENST00000366860 NPM1P06748 294 aaKnown RBP eCLIP24.44■■□□□ 1.5
CNIH4-204ENST00000366860 CDK11AQ9UQ88 783 aaPredicted RBP24.44■■□□□ 1.5
CNIH4-204ENST00000366860 LRRC9Q6ZRR7 1453 aa24.44■■□□□ 1.5
CNIH4-204ENST00000366860 ARID3CA6NKF2 412 aa24.42■■□□□ 1.5
CNIH4-204ENST00000366860 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.42■■□□□ 1.5
CNIH4-204ENST00000366860 HNRNPUL2Q1KMD3 747 aaKnown RBP24.42■■□□□ 1.5
CNIH4-204ENST00000366860 KIF14Q15058 1648 aa24.41■■□□□ 1.5
CNIH4-204ENST00000366860 SUPT6HQ7KZ85 1726 aaKnown RBP24.41■■□□□ 1.5
CNIH4-204ENST00000366860 MTUS2Q5JR59 1369 aa24.41■■□□□ 1.5
CNIH4-204ENST00000366860 MAGI3Q5TCQ9 1506 aa24.4■■□□□ 1.5
CNIH4-204ENST00000366860 TROQ12816 1431 aaPredicted RBP24.4■■□□□ 1.5
CNIH4-204ENST00000366860 WDR7Q9Y4E6 1490 aa24.39■■□□□ 1.5
CNIH4-204ENST00000366860 ASXL2Q76L83 1435 aa24.35■■□□□ 1.49
CNIH4-204ENST00000366860 PLEKHD1A6NEE1 506 aa24.34■■□□□ 1.49
CNIH4-204ENST00000366860 ITSN2Q9NZM3 1697 aa24.27■■□□□ 1.48
CNIH4-204ENST00000366860 KANK4Q5T7N3 995 aaPredicted RBP24.26■■□□□ 1.47
CNIH4-204ENST00000366860 NCOA2Q15596 1464 aa24.26■■□□□ 1.47
CNIH4-204ENST00000366860 ABCA9Q8IUA7 1624 aa24.25■■□□□ 1.47
CNIH4-204ENST00000366860 TTC37Q6PGP7 1564 aa24.24■■□□□ 1.47
CNIH4-204ENST00000366860 DIP2BQ9P265 1576 aa24.24■■□□□ 1.47
CNIH4-204ENST00000366860 MYO5CQ9NQX4 1742 aa24.24■■□□□ 1.47
CNIH4-204ENST00000366860 GLI2P10070 1586 aa24.22■■□□□ 1.47
CNIH4-204ENST00000366860 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.22■■□□□ 1.474e-6■■□□□ 13.9
CNIH4-204ENST00000366860 ABCC10Q5T3U5 1492 aa24.2■■□□□ 1.47
CNIH4-204ENST00000366860 PREX2Q70Z35 1606 aa24.2■■□□□ 1.46
CNIH4-204ENST00000366860 CDC42BPAQ5VT25 1732 aa24.19■■□□□ 1.46
CNIH4-204ENST00000366860 KIF13AQ9H1H9 1805 aa24.17■■□□□ 1.46
CNIH4-204ENST00000366860 ARAP3Q8WWN8 1544 aa24.15■■□□□ 1.46
CNIH4-204ENST00000366860 MAP3K4Q9Y6R4 1608 aa24.15■■□□□ 1.46
CNIH4-204ENST00000366860 MYOM3Q5VTT5 1437 aa24.14■■□□□ 1.45
CNIH4-204ENST00000366860 CCNB3Q8WWL7 1395 aa24.14■■□□□ 1.45
CNIH4-204ENST00000366860 PPARGC1BQ86YN6 1023 aaKnown RBP24.11■■□□□ 1.45
CNIH4-204ENST00000366860 KCNH8Q96L42 1107 aa24.11■■□□□ 1.45
CNIH4-204ENST00000366860 CFAP74Q9C0B2 1584 aa24.11■■□□□ 1.45
CNIH4-204ENST00000366860 PHLDB1Q86UU1 1377 aa24.1■■□□□ 1.45
CNIH4-204ENST00000366860 CDC42BPBQ9Y5S2 1711 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms