RNA–Protein interactions for RNA: ENST00000361987.5

CNTF-201, Transcript of ciliary neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTF, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTF-201ENST00000361987 UBTFP17480 764 aaKnown RBP20.6■□□□□ 0.89
CNTF-201ENST00000361987 JPH4Q96JJ6 628 aa20.6■□□□□ 0.89
CNTF-201ENST00000361987 KIF21BO75037 1637 aa20.6■□□□□ 0.89
CNTF-201ENST00000361987 GOLGA3Q08378 1498 aa20.55■□□□□ 0.88
CNTF-201ENST00000361987 IQGAP2Q13576 1575 aa20.51■□□□□ 0.87
CNTF-201ENST00000361987 RANGAP1P46060 587 aaPredicted RBP20.5■□□□□ 0.87
CNTF-201ENST00000361987 PRG4Q92954 1404 aaPredicted RBP20.5■□□□□ 0.87
CNTF-201ENST00000361987 ARHGEF11O15085 1522 aa20.48■□□□□ 0.87
CNTF-201ENST00000361987 CTTNBP2Q8WZ74 1663 aa20.48■□□□□ 0.87
CNTF-201ENST00000361987 LOC105371045A0A1W2PR82 267 aa20.48■□□□□ 0.87
CNTF-201ENST00000361987 SHROOM2Q13796 1616 aa20.47■□□□□ 0.87
CNTF-201ENST00000361987 RIMBP3CA6NJZ7 1639 aa20.43■□□□□ 0.86
CNTF-201ENST00000361987 RIMBP3BA6NNM3 1639 aa20.43■□□□□ 0.86
CNTF-201ENST00000361987 RIMBP3Q9UFD9 1639 aa20.43■□□□□ 0.86
CNTF-201ENST00000361987 ERCC6L2Q5T890 1561 aa20.43■□□□□ 0.86
CNTF-201ENST00000361987 CYB5RLQ6IPT4 315 aa20.41■□□□□ 0.86
CNTF-201ENST00000361987 CARMIL2Q6F5E8 1435 aa20.41■□□□□ 0.86
CNTF-201ENST00000361987 UGGT2Q9NYU1 1516 aa20.4■□□□□ 0.86
CNTF-201ENST00000361987 TTBK1Q5TCY1 1321 aaPredicted RBP20.4■□□□□ 0.86
CNTF-201ENST00000361987 P3H3Q8IVL6 736 aa20.38■□□□□ 0.85
CNTF-201ENST00000361987 TNIKQ9UKE5 1360 aa20.36■□□□□ 0.85
CNTF-201ENST00000361987 DISP1Q96F81 1524 aa20.36■□□□□ 0.85
CNTF-201ENST00000361987 ARAP1Q96P48 1450 aa20.34■□□□□ 0.85
CNTF-201ENST00000361987 PTPRGP23470 1445 aa20.3■□□□□ 0.84
CNTF-201ENST00000361987 KIAA0556O60303 1618 aa20.3■□□□□ 0.84
CNTF-201ENST00000361987 SAMD9Q5K651 1589 aa20.24■□□□□ 0.83
CNTF-201ENST00000361987 CLIP1P30622 1438 aa20.22■□□□□ 0.83
CNTF-201ENST00000361987 FHOD3Q2V2M9 1422 aa20.22■□□□□ 0.83
CNTF-201ENST00000361987 EFCAB5A4FU69 1503 aa20.22■□□□□ 0.83
CNTF-201ENST00000361987 ARHGAP35Q9NRY4 1499 aa20.21■□□□□ 0.83
CNTF-201ENST00000361987 CEP162Q5TB80 1403 aa20.19■□□□□ 0.82
CNTF-201ENST00000361987 UACAQ9BZF9 1416 aa20.14■□□□□ 0.82
CNTF-201ENST00000361987 PLB1Q6P1J6 1458 aa20.14■□□□□ 0.81
CNTF-201ENST00000361987 NPM1P06748 294 aaKnown RBP eCLIP20.11■□□□□ 0.81
CNTF-201ENST00000361987 FMN1Q68DA7 1419 aa20.1■□□□□ 0.81
CNTF-201ENST00000361987 ATP1B4Q9UN42 357 aaPredicted RBP20.09■□□□□ 0.81
CNTF-201ENST00000361987 ARID3CA6NKF2 412 aa20.09■□□□□ 0.81
CNTF-201ENST00000361987 ADCY10Q96PN6 1610 aa20.08■□□□□ 0.81
CNTF-201ENST00000361987 ABCC2Q92887 1545 aa20.06■□□□□ 0.8
CNTF-201ENST00000361987 UHRF1BP1LA0JNW5 1464 aa20.06■□□□□ 0.8
CNTF-201ENST00000361987 ABCA8O94911 1581 aa20.06■□□□□ 0.8
CNTF-201ENST00000361987 RAPGEF6Q8TEU7 1601 aa20.02■□□□□ 0.8
CNTF-201ENST00000361987 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.02■□□□□ 0.8
CNTF-201ENST00000361987 HNRNPUL2Q1KMD3 747 aaKnown RBP20.02■□□□□ 0.8
CNTF-201ENST00000361987 KDM5BQ9UGL1 1544 aa19.98■□□□□ 0.79
CNTF-201ENST00000361987 NUP153P49790 1475 aaKnown RBP19.97■□□□□ 0.79
CNTF-201ENST00000361987 ATP10BO94823 1461 aa19.96■□□□□ 0.79
CNTF-201ENST00000361987 CASKIN1Q8WXD9 1431 aa19.95■□□□□ 0.78
CNTF-201ENST00000361987 ZCCHC11Q5TAX3 1644 aaKnown RBP19.93■□□□□ 0.78
CNTF-201ENST00000361987 PCF11O94913 1555 aaKnown RBP19.92■□□□□ 0.78
CNTF-201ENST00000361987 HECW1Q76N89 1606 aa19.92■□□□□ 0.78
CNTF-201ENST00000361987 VPS8Q8N3P4 1428 aa19.91■□□□□ 0.78
CNTF-201ENST00000361987 TRHP20396 242 aaPredicted RBP19.91■□□□□ 0.78
CNTF-201ENST00000361987 ASXL2Q76L83 1435 aa19.9■□□□□ 0.78
CNTF-201ENST00000361987 FYCO1Q9BQS8 1478 aa19.9■□□□□ 0.78
CNTF-201ENST00000361987 EPRSP07814 1512 aaKnown RBP19.89■□□□□ 0.78
CNTF-201ENST00000361987 MAPKBP1O60336 1514 aa19.89■□□□□ 0.77
CNTF-201ENST00000361987 PLEKHD1A6NEE1 506 aa19.88■□□□□ 0.77
CNTF-201ENST00000361987 KCNH8Q96L42 1107 aa19.88■□□□□ 0.77
CNTF-201ENST00000361987 CDK13Q14004 1512 aaKnown RBP19.88■□□□□ 0.77
CNTF-201ENST00000361987 CDK11AQ9UQ88 783 aaPredicted RBP19.86■□□□□ 0.77
CNTF-201ENST00000361987 FAM69CQ0P6D2 419 aa19.84■□□□□ 0.77
CNTF-201ENST00000361987 CCDC18Q5T9S5 1454 aa19.83■□□□□ 0.76
CNTF-201ENST00000361987 WDR7Q9Y4E6 1490 aa19.83■□□□□ 0.76
CNTF-201ENST00000361987 LRRIQ1Q96JM4 1722 aa19.81■□□□□ 0.76
CNTF-201ENST00000361987 APLP2Q06481 763 aa19.81■□□□□ 0.76
CNTF-201ENST00000361987 ABCC10Q5T3U5 1492 aa19.79■□□□□ 0.76
CNTF-201ENST00000361987 DIP2BQ9P265 1576 aa19.73■□□□□ 0.75
CNTF-201ENST00000361987 MTUS2Q5JR59 1369 aa19.72■□□□□ 0.75
CNTF-201ENST00000361987 TROQ12816 1431 aaPredicted RBP19.72■□□□□ 0.75
CNTF-201ENST00000361987 MAGI3Q5TCQ9 1506 aa19.7■□□□□ 0.74
CNTF-201ENST00000361987 KANK4Q5T7N3 995 aaPredicted RBP19.69■□□□□ 0.74
CNTF-201ENST00000361987 KIF13AQ9H1H9 1805 aa19.69■□□□□ 0.74
CNTF-201ENST00000361987 TIAM1Q13009 1591 aa19.69■□□□□ 0.74
CNTF-201ENST00000361987 GLI2P10070 1586 aa19.67■□□□□ 0.74
CNTF-201ENST00000361987 MAP3K1Q13233 1512 aa19.66■□□□□ 0.74
CNTF-201ENST00000361987 CD109Q6YHK3 1445 aa19.65■□□□□ 0.74
CNTF-201ENST00000361987 CFAP43Q8NDM7 1665 aa19.65■□□□□ 0.74
CNTF-201ENST00000361987 LRRC9Q6ZRR7 1453 aa19.64■□□□□ 0.73
CNTF-201ENST00000361987 KIF14Q15058 1648 aa19.63■□□□□ 0.73
CNTF-201ENST00000361987 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.63■□□□□ 0.73
CNTF-201ENST00000361987 TSPOAP1O95153 1857 aa19.61■□□□□ 0.73
CNTF-201ENST00000361987 EHBP1L1Q8N3D4 1523 aa19.61■□□□□ 0.73
CNTF-201ENST00000361987 ABCA9Q8IUA7 1624 aa19.61■□□□□ 0.73
CNTF-201ENST00000361987 PPARGC1BQ86YN6 1023 aaKnown RBP19.6■□□□□ 0.73
CNTF-201ENST00000361987 MAP3K4Q9Y6R4 1608 aa19.6■□□□□ 0.73
CNTF-201ENST00000361987 TTC37Q6PGP7 1564 aa19.58■□□□□ 0.73
CNTF-201ENST00000361987 CCNB3Q8WWL7 1395 aa19.55■□□□□ 0.72
CNTF-201ENST00000361987 PLCH2O75038 1416 aa19.54■□□□□ 0.72
CNTF-201ENST00000361987 NCOA2Q15596 1464 aa19.54■□□□□ 0.72
CNTF-201ENST00000361987 SUPT6HQ7KZ85 1726 aaKnown RBP19.53■□□□□ 0.72
CNTF-201ENST00000361987 TEX14Q8IWB6 1497 aa19.53■□□□□ 0.72
CNTF-201ENST00000361987 EFCAB2Q5VUJ9 269 aa19.52■□□□□ 0.71
CNTF-201ENST00000361987 CFDP1Q9UEE9 299 aaPredicted RBP19.51■□□□□ 0.71
CNTF-201ENST00000361987 PPRC1Q5VV67 1664 aaKnown RBP19.5■□□□□ 0.71
CNTF-201ENST00000361987 ZNF777Q9ULD5 760 aaPredicted RBP19.5■□□□□ 0.71
CNTF-201ENST00000361987 GPATCH8Q9UKJ3 1502 aaKnown RBP19.5■□□□□ 0.71
CNTF-201ENST00000361987 FANCAO15360 1455 aa19.49■□□□□ 0.71
CNTF-201ENST00000361987 MYO5CQ9NQX4 1742 aa19.49■□□□□ 0.71
CNTF-201ENST00000361987 ARHGAP5Q13017 1502 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms