RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 DAXXQ9UER7 740 aaPredicted RBP18.77■□□□□ 0.6
SGMS1-202ENST00000361781 RAB3GAP2Q9H2M9 1393 aa18.77■□□□□ 0.6
SGMS1-202ENST00000361781 B4GALNT3Q6L9W6 998 aa18.74■□□□□ 0.59
SGMS1-202ENST00000361781 TOP2AP11388 1531 aaKnown RBP18.74■□□□□ 0.59
SGMS1-202ENST00000361781 BAZ1BQ9UIG0 1483 aaKnown RBP18.74■□□□□ 0.59
SGMS1-202ENST00000361781 ZNF777Q9ULD5 760 aaPredicted RBP18.71■□□□□ 0.59
SGMS1-202ENST00000361781 MTUS2Q5JR59 1369 aa18.7■□□□□ 0.58
SGMS1-202ENST00000361781 CCDC136Q96JN2 1154 aa18.7■□□□□ 0.58
SGMS1-202ENST00000361781 ANP32AP39687 249 aaKnown RBP18.69■□□□□ 0.58
SGMS1-202ENST00000361781 KIF27Q86VH2 1401 aa18.68■□□□□ 0.58
SGMS1-202ENST00000361781 EIF4G2P78344 907 aaKnown RBP eCLIP18.65■□□□□ 0.585e-9■■■□□ 17.2
SGMS1-202ENST00000361781 SMARCA2P51531 1590 aa18.61■□□□□ 0.57
SGMS1-202ENST00000361781 SETD5Q9C0A6 1442 aa18.61■□□□□ 0.57
SGMS1-202ENST00000361781 FOXD1Q16676 465 aa18.61■□□□□ 0.57
SGMS1-202ENST00000361781 PPP1R15AO75807 674 aaPredicted RBP18.6■□□□□ 0.57
SGMS1-202ENST00000361781 FBLN2P98095 1184 aa18.58■□□□□ 0.56
SGMS1-202ENST00000361781 TMC1Q8TDI8 760 aa18.57■□□□□ 0.56
SGMS1-202ENST00000361781 SMARCA4P51532 1647 aa18.57■□□□□ 0.56
SGMS1-202ENST00000361781 KDM2AQ9Y2K7 1162 aa18.57■□□□□ 0.56
SGMS1-202ENST00000361781 ZBTB47Q9UFB7 747 aaPredicted RBP18.55■□□□□ 0.56
SGMS1-202ENST00000361781 CCER2I3L3R5 266 aa18.54■□□□□ 0.56
SGMS1-202ENST00000361781 HSPA5P11021 654 aaKnown RBP18.52■□□□□ 0.56
SGMS1-202ENST00000361781 PPP4R2Q9NY27 417 aa18.52■□□□□ 0.56
SGMS1-202ENST00000361781 CUX2O14529 1486 aa18.52■□□□□ 0.56
SGMS1-202ENST00000361781 MYT1LQ9UL68 1186 aa18.52■□□□□ 0.55
SGMS1-202ENST00000361781 SLC4A1APQ9BWU0 796 aaKnown RBP18.51■□□□□ 0.55
SGMS1-202ENST00000361781 CARMIL1Q5VZK9 1371 aa18.5■□□□□ 0.55
SGMS1-202ENST00000361781 KIF21BO75037 1637 aa18.49■□□□□ 0.55
SGMS1-202ENST00000361781 RTN4Q9NQC3 1192 aaKnown RBP18.48■□□□□ 0.55
SGMS1-202ENST00000361781 DEKP35659 375 aaKnown RBP18.45■□□□□ 0.54
SGMS1-202ENST00000361781 LAS1LQ9Y4W2 734 aaKnown RBP18.42■□□□□ 0.54
SGMS1-202ENST00000361781 SYNJ1O43426 1573 aa18.4■□□□□ 0.54
SGMS1-202ENST00000361781 NOP58Q9Y2X3 529 aaKnown RBP18.4■□□□□ 0.54
SGMS1-202ENST00000361781 EIF5BO60841 1220 aaKnown RBP18.39■□□□□ 0.54
SGMS1-202ENST00000361781 TIMELESSQ9UNS1 1208 aa18.39■□□□□ 0.53
SGMS1-202ENST00000361781 ARAP1Q96P48 1450 aa18.39■□□□□ 0.53
SGMS1-202ENST00000361781 FHOD3Q2V2M9 1422 aa18.37■□□□□ 0.53
SGMS1-202ENST00000361781 ATAD2BQ9ULI0 1458 aa18.36■□□□□ 0.53
SGMS1-202ENST00000361781 PHLDB1Q86UU1 1377 aa18.34■□□□□ 0.53
SGMS1-202ENST00000361781 L3MBTL2Q969R5 705 aa18.33■□□□□ 0.53
SGMS1-202ENST00000361781 FHAD1B1AJZ9 1412 aa18.33■□□□□ 0.52
SGMS1-202ENST00000361781 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.33■□□□□ 0.522e-6■■■□□ 15
SGMS1-202ENST00000361781 ARHGAP35Q9NRY4 1499 aa18.32■□□□□ 0.52
SGMS1-202ENST00000361781 RGL3Q3MIN7 710 aa18.32■□□□□ 0.52
SGMS1-202ENST00000361781 ARXQ96QS3 562 aa18.32■□□□□ 0.52
SGMS1-202ENST00000361781 CCDC184Q52MB2 194 aa18.26■□□□□ 0.51
SGMS1-202ENST00000361781 MPHOSPH9Q99550 1183 aa18.26■□□□□ 0.51
SGMS1-202ENST00000361781 CANXP27824 592 aaKnown RBP18.25■□□□□ 0.51
SGMS1-202ENST00000361781 CARD11Q9BXL7 1154 aa18.25■□□□□ 0.51
SGMS1-202ENST00000361781 MSH5O43196 834 aa18.24■□□□□ 0.51
SGMS1-202ENST00000361781 NEFMP07197 916 aa18.24■□□□□ 0.51
SGMS1-202ENST00000361781 WDR97A6NE52 1622 aa18.23■□□□□ 0.51
SGMS1-202ENST00000361781 RRBP1Q9P2E9 1410 aaKnown RBP18.22■□□□□ 0.51
SGMS1-202ENST00000361781 PRKRIP1Q9H875 184 aaPredicted RBP18.22■□□□□ 0.51
SGMS1-202ENST00000361781 IGF1RP08069 1367 aa18.2■□□□□ 0.5
SGMS1-202ENST00000361781 TDRD9Q8NDG6 1382 aaKnown RBP18.2■□□□□ 0.5
SGMS1-202ENST00000361781 WASHC2AQ641Q2 1341 aa18.18■□□□□ 0.5
SGMS1-202ENST00000361781 CC2D1BQ5T0F9 858 aaKnown RBP18.18■□□□□ 0.5
SGMS1-202ENST00000361781 CFDP1Q9UEE9 299 aaPredicted RBP18.18■□□□□ 0.5
SGMS1-202ENST00000361781 TSPY4P0CV99 314 aa18.14■□□□□ 0.5
SGMS1-202ENST00000361781 TSPY10P0CW01 314 aa18.14■□□□□ 0.5
SGMS1-202ENST00000361781 RGS3P49796 1198 aa18.14■□□□□ 0.5
SGMS1-202ENST00000361781 FANCIQ9NVI1 1328 aa18.13■□□□□ 0.49
SGMS1-202ENST00000361781 DCAF11Q8TEB1 546 aa18.13■□□□□ 0.49
SGMS1-202ENST00000361781 CCDC18Q5T9S5 1454 aa18.12■□□□□ 0.49
SGMS1-202ENST00000361781 PRXQ9BXM0 1461 aa18.12■□□□□ 0.49
SGMS1-202ENST00000361781 PAK3O75914 559 aaPredicted RBP18.11■□□□□ 0.49
SGMS1-202ENST00000361781 EIF4G1Q04637 1599 aaKnown RBP18.11■□□□□ 0.49
SGMS1-202ENST00000361781 LRRC9Q6ZRR7 1453 aa18.1■□□□□ 0.49
SGMS1-202ENST00000361781 PKD2Q13563 968 aa18.1■□□□□ 0.49
SGMS1-202ENST00000361781 FMN1Q68DA7 1419 aa18.1■□□□□ 0.49
SGMS1-202ENST00000361781 SENP3Q9H4L4 574 aaPredicted RBP18.1■□□□□ 0.49
SGMS1-202ENST00000361781 WDR43Q15061 677 aaKnown RBP eCLIP18.09■□□□□ 0.49
SGMS1-202ENST00000361781 NUDCQ9Y266 331 aa18.09■□□□□ 0.49
SGMS1-202ENST00000361781 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.08■□□□□ 0.48
SGMS1-202ENST00000361781 IPO9Q96P70 1041 aaKnown RBP18.08■□□□□ 0.48
SGMS1-202ENST00000361781 ERICH6BQ5W0A0 696 aa18.07■□□□□ 0.48
SGMS1-202ENST00000361781 PLIN1O60240 522 aa18.06■□□□□ 0.48
SGMS1-202ENST00000361781 ZBED9Q6R2W3 1325 aa18.04■□□□□ 0.48
SGMS1-202ENST00000361781 SLC4A3P48751 1232 aa18.03■□□□□ 0.48
SGMS1-202ENST00000361781 EXOC6Q8TAG9 804 aa18.03■□□□□ 0.48
SGMS1-202ENST00000361781 RCAN3Q9UKA8 241 aa18.03■□□□□ 0.48
SGMS1-202ENST00000361781 NEUROD2Q15784 382 aa18.01■□□□□ 0.47
SGMS1-202ENST00000361781 C11orf95C9JLR9 678 aaPredicted RBP18.01■□□□□ 0.47
SGMS1-202ENST00000361781 FGD6Q6ZV73 1430 aa18■□□□□ 0.47
SGMS1-202ENST00000361781 CHGAP10645 457 aaKnown RBP18■□□□□ 0.47
SGMS1-202ENST00000361781 KIF7Q2M1P5 1343 aa18■□□□□ 0.47
SGMS1-202ENST00000361781 ZNF644Q9H582 1327 aaPredicted RBP18■□□□□ 0.47
SGMS1-202ENST00000361781 CHMP7Q8WUX9 453 aaPredicted RBP18■□□□□ 0.47
SGMS1-202ENST00000361781 CADPSQ9ULU8 1353 aa17.99■□□□□ 0.47
SGMS1-202ENST00000361781 RAD54L2Q9Y4B4 1467 aa17.98■□□□□ 0.47
SGMS1-202ENST00000361781 ST20-MTHFSA0A0A6YYL1 179 aa17.97■□□□□ 0.47
SGMS1-202ENST00000361781 NBPF8Q3BBV2 869 aa17.97■□□□□ 0.47
SGMS1-202ENST00000361781 ERICH3Q5RHP9 1530 aa17.97■□□□□ 0.47
SGMS1-202ENST00000361781 AKNAQ7Z591 1439 aa17.96■□□□□ 0.47
SGMS1-202ENST00000361781 CCDC7Q96M83 1385 aa17.96■□□□□ 0.47
SGMS1-202ENST00000361781 PPM1GO15355 546 aaPredicted RBP17.96■□□□□ 0.47
SGMS1-202ENST00000361781 FGD5Q6ZNL6 1462 aa17.96■□□□□ 0.47
SGMS1-202ENST00000361781 PLEKHD1A6NEE1 506 aa17.95■□□□□ 0.46
SGMS1-202ENST00000361781 UACAQ9BZF9 1416 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms