RNA–Protein interactions for RNA: ENST00000361720.9

GPATCH3-201, Transcript of G-patch domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPATCH3, Length 2,123 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH3-201ENST00000361720 FBLN2P98095 1184 aa29.26■■■□□ 2.27
GPATCH3-201ENST00000361720 GRIN2AQ12879 1464 aa29.25■■■□□ 2.27
GPATCH3-201ENST00000361720 CTTNBP2Q8WZ74 1663 aa29.23■■■□□ 2.27
GPATCH3-201ENST00000361720 CHMP7Q8WUX9 453 aaPredicted RBP29.22■■■□□ 2.27
GPATCH3-201ENST00000361720 CHD1O14646 1710 aa29.19■■■□□ 2.26
GPATCH3-201ENST00000361720 CLIP1P30622 1438 aa29.15■■■□□ 2.26
GPATCH3-201ENST00000361720 CEP170Q5SW79 1584 aa29.13■■■□□ 2.25
GPATCH3-201ENST00000361720 PPARGC1BQ86YN6 1023 aaKnown RBP29.06■■■□□ 2.24
GPATCH3-201ENST00000361720 NUP160Q12769 1436 aa29.04■■■□□ 2.24
GPATCH3-201ENST00000361720 ARHGAP35Q9NRY4 1499 aa29.03■■■□□ 2.24
GPATCH3-201ENST00000361720 IQGAP2Q13576 1575 aa29.03■■■□□ 2.24
GPATCH3-201ENST00000361720 KIAA0586Q9BVV6 1533 aa28.98■■■□□ 2.23
GPATCH3-201ENST00000361720 ARAP1Q96P48 1450 aa28.98■■■□□ 2.23
GPATCH3-201ENST00000361720 P3H3Q8IVL6 736 aa28.96■■■□□ 2.23
GPATCH3-201ENST00000361720 SAMD9Q5K651 1589 aa28.89■■■□□ 2.22
GPATCH3-201ENST00000361720 FHOD3Q2V2M9 1422 aa28.88■■■□□ 2.21
GPATCH3-201ENST00000361720 ZEB1P37275 1124 aaPredicted RBP28.86■■■□□ 2.21
GPATCH3-201ENST00000361720 UGGT2Q9NYU1 1516 aa28.86■■■□□ 2.21
GPATCH3-201ENST00000361720 EFCAB5A4FU69 1503 aa28.85■■■□□ 2.21
GPATCH3-201ENST00000361720 VPS8Q8N3P4 1428 aa28.81■■■□□ 2.2
GPATCH3-201ENST00000361720 DISP1Q96F81 1524 aa28.8■■■□□ 2.2
GPATCH3-201ENST00000361720 JPH4Q96JJ6 628 aa28.79■■■□□ 2.2
GPATCH3-201ENST00000361720 CLASP1Q7Z460 1538 aa28.78■■■□□ 2.2
GPATCH3-201ENST00000361720 KIAA0556O60303 1618 aa28.76■■■□□ 2.19
GPATCH3-201ENST00000361720 SHROOM2Q13796 1616 aa28.71■■■□□ 2.19
GPATCH3-201ENST00000361720 TTBK1Q5TCY1 1321 aaPredicted RBP28.69■■■□□ 2.18
GPATCH3-201ENST00000361720 ERCC6L2Q5T890 1561 aa28.68■■■□□ 2.18
GPATCH3-201ENST00000361720 PRG4Q92954 1404 aaPredicted RBP28.67■■■□□ 2.18
GPATCH3-201ENST00000361720 PCF11O94913 1555 aaKnown RBP28.66■■■□□ 2.18
GPATCH3-201ENST00000361720 OSCARQ8IYS5 282 aa28.64■■■□□ 2.18
GPATCH3-201ENST00000361720 CARMIL2Q6F5E8 1435 aa28.59■■■□□ 2.17
GPATCH3-201ENST00000361720 FMN1Q68DA7 1419 aa28.58■■■□□ 2.17
GPATCH3-201ENST00000361720 ATP1B4Q9UN42 357 aaPredicted RBP28.55■■■□□ 2.16
GPATCH3-201ENST00000361720 LRRIQ1Q96JM4 1722 aa28.52■■■□□ 2.16
GPATCH3-201ENST00000361720 CASKIN1Q8WXD9 1431 aa28.52■■■□□ 2.16
GPATCH3-201ENST00000361720 FYCO1Q9BQS8 1478 aa28.5■■■□□ 2.15
GPATCH3-201ENST00000361720 PLB1Q6P1J6 1458 aa28.46■■■□□ 2.15
GPATCH3-201ENST00000361720 ARID3CA6NKF2 412 aa28.43■■■□□ 2.14
GPATCH3-201ENST00000361720 APLP2Q06481 763 aa28.43■■■□□ 2.14
GPATCH3-201ENST00000361720 RAPGEF6Q8TEU7 1601 aa28.42■■■□□ 2.14
GPATCH3-201ENST00000361720 KANK4Q5T7N3 995 aaPredicted RBP28.42■■■□□ 2.14
GPATCH3-201ENST00000361720 PTPRGP23470 1445 aa28.42■■■□□ 2.14
GPATCH3-201ENST00000361720 TIAM1Q13009 1591 aa28.4■■■□□ 2.14
GPATCH3-201ENST00000361720 HECW1Q76N89 1606 aa28.39■■■□□ 2.13
GPATCH3-201ENST00000361720 CFAP43Q8NDM7 1665 aa28.38■■■□□ 2.13
GPATCH3-201ENST00000361720 ABCA8O94911 1581 aa28.37■■■□□ 2.13
GPATCH3-201ENST00000361720 NUP153P49790 1475 aaKnown RBP28.36■■■□□ 2.13
GPATCH3-201ENST00000361720 CDK13Q14004 1512 aaKnown RBP28.35■■■□□ 2.13
GPATCH3-201ENST00000361720 EPRSP07814 1512 aaKnown RBP28.32■■■□□ 2.12
GPATCH3-201ENST00000361720 MAP3K1Q13233 1512 aa28.3■■■□□ 2.12
GPATCH3-201ENST00000361720 LRRC9Q6ZRR7 1453 aa28.26■■■□□ 2.11
GPATCH3-201ENST00000361720 ARHGEF11O15085 1522 aa28.25■■■□□ 2.11
GPATCH3-201ENST00000361720 UACAQ9BZF9 1416 aa28.25■■■□□ 2.11
GPATCH3-201ENST00000361720 MAGI3Q5TCQ9 1506 aa28.25■■■□□ 2.11
GPATCH3-201ENST00000361720 CCDC18Q5T9S5 1454 aa28.24■■■□□ 2.11
GPATCH3-201ENST00000361720 ABCC2Q92887 1545 aa28.19■■■□□ 2.1
GPATCH3-201ENST00000361720 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.18■■■□□ 2.1
GPATCH3-201ENST00000361720 HNRNPUL2Q1KMD3 747 aaKnown RBP28.18■■■□□ 2.1
GPATCH3-201ENST00000361720 RIMBP3CA6NJZ7 1639 aa28.18■■■□□ 2.1
GPATCH3-201ENST00000361720 RIMBP3BA6NNM3 1639 aa28.18■■■□□ 2.1
GPATCH3-201ENST00000361720 RIMBP3Q9UFD9 1639 aa28.18■■■□□ 2.1
GPATCH3-201ENST00000361720 ATP10BO94823 1461 aa28.17■■■□□ 2.1
GPATCH3-201ENST00000361720 ADCY10Q96PN6 1610 aa28.15■■■□□ 2.1
GPATCH3-201ENST00000361720 MTUS2Q5JR59 1369 aa28.14■■■□□ 2.1
GPATCH3-201ENST00000361720 EHBP1L1Q8N3D4 1523 aa28.09■■■□□ 2.09
GPATCH3-201ENST00000361720 UHRF1BP1LA0JNW5 1464 aa28.09■■■□□ 2.09
GPATCH3-201ENST00000361720 ZCCHC11Q5TAX3 1644 aaKnown RBP28.06■■■□□ 2.08
GPATCH3-201ENST00000361720 PHLDB1Q86UU1 1377 aa28.04■■■□□ 2.08
GPATCH3-201ENST00000361720 CCER1Q8TC90 406 aaPredicted RBP28.03■■■□□ 2.08
GPATCH3-201ENST00000361720 SUPT6HQ7KZ85 1726 aaKnown RBP28.02■■■□□ 2.08
GPATCH3-201ENST00000361720 KDM5BQ9UGL1 1544 aa28.02■■■□□ 2.08
GPATCH3-201ENST00000361720 NCOA2Q15596 1464 aa28.01■■■□□ 2.07
GPATCH3-201ENST00000361720 CYB5RLQ6IPT4 315 aa28■■■□□ 2.07
GPATCH3-201ENST00000361720 KIF14Q15058 1648 aa27.99■■■□□ 2.07
GPATCH3-201ENST00000361720 TROQ12816 1431 aaPredicted RBP27.99■■■□□ 2.07
GPATCH3-201ENST00000361720 CDK11AQ9UQ88 783 aaPredicted RBP27.97■■■□□ 2.07
GPATCH3-201ENST00000361720 PLEKHD1A6NEE1 506 aa27.94■■■□□ 2.06
GPATCH3-201ENST00000361720 RRBP1Q9P2E9 1410 aaKnown RBP27.87■■■□□ 2.05
GPATCH3-201ENST00000361720 MYOM3Q5VTT5 1437 aa27.83■■■□□ 2.05
GPATCH3-201ENST00000361720 CCNB3Q8WWL7 1395 aa27.82■■■□□ 2.04
GPATCH3-201ENST00000361720 KCNH8Q96L42 1107 aa27.82■■■□□ 2.04
GPATCH3-201ENST00000361720 ABCC10Q5T3U5 1492 aa27.81■■■□□ 2.04
GPATCH3-201ENST00000361720 FGD6Q6ZV73 1430 aa27.81■■■□□ 2.04
GPATCH3-201ENST00000361720 ASXL2Q76L83 1435 aa27.8■■■□□ 2.04
GPATCH3-201ENST00000361720 TTC37Q6PGP7 1564 aa27.78■■■□□ 2.04
GPATCH3-201ENST00000361720 WDR7Q9Y4E6 1490 aa27.78■■■□□ 2.04
GPATCH3-201ENST00000361720 NPM1P06748 294 aaKnown RBP eCLIP27.77■■■□□ 2.04
GPATCH3-201ENST00000361720 CDC42BPAQ5VT25 1732 aa27.77■■■□□ 2.04
GPATCH3-201ENST00000361720 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.76■■■□□ 2.03
GPATCH3-201ENST00000361720 FAM50AQ14320 339 aaKnown RBP27.75■■■□□ 2.03
GPATCH3-201ENST00000361720 GPATCH8Q9UKJ3 1502 aaKnown RBP27.75■■■□□ 2.03
GPATCH3-201ENST00000361720 PTPN23Q9H3S7 1636 aa27.73■■■□□ 2.03
GPATCH3-201ENST00000361720 ITGAEP38570 1179 aa27.7■■■□□ 2.03
GPATCH3-201ENST00000361720 ITSN2Q9NZM3 1697 aa27.7■■■□□ 2.02
GPATCH3-201ENST00000361720 ZNF644Q9H582 1327 aaPredicted RBP27.68■■■□□ 2.02
GPATCH3-201ENST00000361720 CDC42BPBQ9Y5S2 1711 aa27.67■■■□□ 2.02
GPATCH3-201ENST00000361720 MIA2Q96PC5 1412 aa27.65■■■□□ 2.02
GPATCH3-201ENST00000361720 PREX2Q70Z35 1606 aa27.64■■■□□ 2.02
GPATCH3-201ENST00000361720 CFDP1Q9UEE9 299 aaPredicted RBP27.64■■■□□ 2.01
GPATCH3-201ENST00000361720 TCOF1Q13428 1488 aaKnown RBP27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms