RNA–Protein interactions for RNA: ENST00000361168.9

CLK2-202, Transcript of CDC like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLK2, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-202ENST00000361168 KIAA0586Q9BVV6 1533 aa29.35■■■□□ 2.29
CLK2-202ENST00000361168 DNAJC5Q9H3Z4 198 aa29.34■■■□□ 2.29
CLK2-202ENST00000361168 GOLGA3Q08378 1498 aa29.34■■■□□ 2.29
CLK2-202ENST00000361168 UBTFP17480 764 aaKnown RBP29.33■■■□□ 2.29
CLK2-202ENST00000361168 JPH4Q96JJ6 628 aa29.3■■■□□ 2.28
CLK2-202ENST00000361168 RANGAP1P46060 587 aaPredicted RBP29.27■■■□□ 2.28
CLK2-202ENST00000361168 IQGAP2Q13576 1575 aa29.25■■■□□ 2.27
CLK2-202ENST00000361168 CTTNBP2Q8WZ74 1663 aa29.24■■■□□ 2.27
CLK2-202ENST00000361168 ERCC6L2Q5T890 1561 aa29.23■■■□□ 2.27
CLK2-202ENST00000361168 SHROOM2Q13796 1616 aa29.21■■■□□ 2.27
CLK2-202ENST00000361168 PRG4Q92954 1404 aaPredicted RBP29.19■■■□□ 2.26
CLK2-202ENST00000361168 ARHGEF11O15085 1522 aa29.18■■■□□ 2.26
CLK2-202ENST00000361168 RIMBP3CA6NJZ7 1639 aa29.11■■■□□ 2.25
CLK2-202ENST00000361168 RIMBP3BA6NNM3 1639 aa29.11■■■□□ 2.25
CLK2-202ENST00000361168 RIMBP3Q9UFD9 1639 aa29.11■■■□□ 2.25
CLK2-202ENST00000361168 DISP1Q96F81 1524 aa29.09■■■□□ 2.25
CLK2-202ENST00000361168 UGGT2Q9NYU1 1516 aa29.09■■■□□ 2.25
CLK2-202ENST00000361168 P3H3Q8IVL6 736 aa29.08■■■□□ 2.25
CLK2-202ENST00000361168 TNIKQ9UKE5 1360 aa29.07■■■□□ 2.24
CLK2-202ENST00000361168 TTBK1Q5TCY1 1321 aaPredicted RBP29.06■■■□□ 2.24
CLK2-202ENST00000361168 ARAP1Q96P48 1450 aa29■■■□□ 2.23
CLK2-202ENST00000361168 CYB5RLQ6IPT4 315 aa28.98■■■□□ 2.23
CLK2-202ENST00000361168 KIAA0556O60303 1618 aa28.98■■■□□ 2.23
CLK2-202ENST00000361168 CARMIL2Q6F5E8 1435 aa28.98■■■□□ 2.23
CLK2-202ENST00000361168 SAMD9Q5K651 1589 aa28.94■■■□□ 2.22
CLK2-202ENST00000361168 ARHGAP35Q9NRY4 1499 aa28.92■■■□□ 2.22
CLK2-202ENST00000361168 FHOD3Q2V2M9 1422 aa28.91■■■□□ 2.22
CLK2-202ENST00000361168 CEP162Q5TB80 1403 aa28.89■■■□□ 2.22
CLK2-202ENST00000361168 PTPRGP23470 1445 aa28.88■■■□□ 2.21
CLK2-202ENST00000361168 CLIP1P30622 1438 aa28.88■■■□□ 2.21
CLK2-202ENST00000361168 EFCAB5A4FU69 1503 aa28.83■■■□□ 2.21
CLK2-202ENST00000361168 PLB1Q6P1J6 1458 aa28.76■■■□□ 2.2
CLK2-202ENST00000361168 UACAQ9BZF9 1416 aa28.68■■■□□ 2.18
CLK2-202ENST00000361168 ARID3CA6NKF2 412 aa28.67■■■□□ 2.18
CLK2-202ENST00000361168 ADCY10Q96PN6 1610 aa28.67■■■□□ 2.18
CLK2-202ENST00000361168 ABCA8O94911 1581 aa28.63■■■□□ 2.17
CLK2-202ENST00000361168 FMN1Q68DA7 1419 aa28.6■■■□□ 2.17
CLK2-202ENST00000361168 ABCC2Q92887 1545 aa28.6■■■□□ 2.17
CLK2-202ENST00000361168 ATP1B4Q9UN42 357 aaPredicted RBP28.59■■■□□ 2.17
CLK2-202ENST00000361168 UHRF1BP1LA0JNW5 1464 aa28.56■■■□□ 2.16
CLK2-202ENST00000361168 RAPGEF6Q8TEU7 1601 aa28.56■■■□□ 2.16
CLK2-202ENST00000361168 NUP153P49790 1475 aaKnown RBP28.55■■■□□ 2.16
CLK2-202ENST00000361168 PCF11O94913 1555 aaKnown RBP28.52■■■□□ 2.16
CLK2-202ENST00000361168 KDM5BQ9UGL1 1544 aa28.47■■■□□ 2.15
CLK2-202ENST00000361168 ATP10BO94823 1461 aa28.47■■■□□ 2.15
CLK2-202ENST00000361168 CASKIN1Q8WXD9 1431 aa28.47■■■□□ 2.15
CLK2-202ENST00000361168 VPS8Q8N3P4 1428 aa28.46■■■□□ 2.15
CLK2-202ENST00000361168 NPM1P06748 294 aaKnown RBP eCLIP28.45■■■□□ 2.15
CLK2-202ENST00000361168 CDK13Q14004 1512 aaKnown RBP28.44■■■□□ 2.14
CLK2-202ENST00000361168 ZCCHC11Q5TAX3 1644 aaKnown RBP28.43■■■□□ 2.14
CLK2-202ENST00000361168 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.43■■■□□ 2.14
CLK2-202ENST00000361168 HNRNPUL2Q1KMD3 747 aaKnown RBP28.43■■■□□ 2.14
CLK2-202ENST00000361168 LRRIQ1Q96JM4 1722 aa28.41■■■□□ 2.14
CLK2-202ENST00000361168 FYCO1Q9BQS8 1478 aa28.4■■■□□ 2.14
CLK2-202ENST00000361168 EPRSP07814 1512 aaKnown RBP28.4■■■□□ 2.14
CLK2-202ENST00000361168 HECW1Q76N89 1606 aa28.39■■■□□ 2.14
CLK2-202ENST00000361168 ASXL2Q76L83 1435 aa28.35■■■□□ 2.13
CLK2-202ENST00000361168 MAPKBP1O60336 1514 aa28.3■■■□□ 2.12
CLK2-202ENST00000361168 KCNH8Q96L42 1107 aa28.27■■■□□ 2.12
CLK2-202ENST00000361168 WDR7Q9Y4E6 1490 aa28.24■■■□□ 2.11
CLK2-202ENST00000361168 MAGI3Q5TCQ9 1506 aa28.24■■■□□ 2.11
CLK2-202ENST00000361168 CCDC18Q5T9S5 1454 aa28.23■■■□□ 2.11
CLK2-202ENST00000361168 PLEKHD1A6NEE1 506 aa28.23■■■□□ 2.11
CLK2-202ENST00000361168 TRHP20396 242 aaPredicted RBP28.21■■■□□ 2.11
CLK2-202ENST00000361168 KANK4Q5T7N3 995 aaPredicted RBP28.19■■■□□ 2.1
CLK2-202ENST00000361168 FAM69CQ0P6D2 419 aa28.17■■■□□ 2.1
CLK2-202ENST00000361168 ABCC10Q5T3U5 1492 aa28.16■■■□□ 2.1
CLK2-202ENST00000361168 TIAM1Q13009 1591 aa28.15■■■□□ 2.1
CLK2-202ENST00000361168 CDK11AQ9UQ88 783 aaPredicted RBP28.15■■■□□ 2.1
CLK2-202ENST00000361168 DIP2BQ9P265 1576 aa28.14■■■□□ 2.1
CLK2-202ENST00000361168 PPARGC1BQ86YN6 1023 aaKnown RBP28.12■■■□□ 2.09
CLK2-202ENST00000361168 TROQ12816 1431 aaPredicted RBP28.11■■■□□ 2.09
CLK2-202ENST00000361168 CFAP43Q8NDM7 1665 aa28.11■■■□□ 2.09
CLK2-202ENST00000361168 MTUS2Q5JR59 1369 aa28.09■■■□□ 2.09
CLK2-202ENST00000361168 APLP2Q06481 763 aa28.09■■■□□ 2.09
CLK2-202ENST00000361168 KIF13AQ9H1H9 1805 aa28.08■■■□□ 2.09
CLK2-202ENST00000361168 KIF14Q15058 1648 aa28.08■■■□□ 2.09
CLK2-202ENST00000361168 LRRC9Q6ZRR7 1453 aa28.05■■■□□ 2.08
CLK2-202ENST00000361168 MAP3K1Q13233 1512 aa28.04■■■□□ 2.08
CLK2-202ENST00000361168 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.03■■■□□ 2.084e-40■■■□□ 15.3
CLK2-202ENST00000361168 TTC37Q6PGP7 1564 aa28■■■□□ 2.07
CLK2-202ENST00000361168 GLI2P10070 1586 aa27.99■■■□□ 2.07
CLK2-202ENST00000361168 EHBP1L1Q8N3D4 1523 aa27.98■■■□□ 2.07
CLK2-202ENST00000361168 CD109Q6YHK3 1445 aa27.95■■■□□ 2.07
CLK2-202ENST00000361168 ABCA9Q8IUA7 1624 aa27.95■■■□□ 2.07
CLK2-202ENST00000361168 MAP3K4Q9Y6R4 1608 aa27.94■■■□□ 2.06
CLK2-202ENST00000361168 TSPOAP1O95153 1857 aa27.93■■■□□ 2.06
CLK2-202ENST00000361168 NCOA2Q15596 1464 aa27.91■■■□□ 2.06
CLK2-202ENST00000361168 PPRC1Q5VV67 1664 aaKnown RBP27.87■■■□□ 2.05
CLK2-202ENST00000361168 SUPT6HQ7KZ85 1726 aaKnown RBP27.85■■■□□ 2.05
CLK2-202ENST00000361168 GPATCH8Q9UKJ3 1502 aaKnown RBP27.84■■■□□ 2.05
CLK2-202ENST00000361168 PLCH2O75038 1416 aa27.83■■■□□ 2.05
CLK2-202ENST00000361168 PHLDB1Q86UU1 1377 aa27.83■■■□□ 2.05
CLK2-202ENST00000361168 CCNB3Q8WWL7 1395 aa27.83■■■□□ 2.05
CLK2-202ENST00000361168 CDC42BPAQ5VT25 1732 aa27.8■■■□□ 2.04
CLK2-202ENST00000361168 MYO5CQ9NQX4 1742 aa27.78■■■□□ 2.04
CLK2-202ENST00000361168 CDC42BPBQ9Y5S2 1711 aa27.78■■■□□ 2.04
CLK2-202ENST00000361168 ZNF644Q9H582 1327 aaPredicted RBP27.76■■■□□ 2.03
CLK2-202ENST00000361168 FANCAO15360 1455 aa27.76■■■□□ 2.03
CLK2-202ENST00000361168 ZNF777Q9ULD5 760 aaPredicted RBP27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms