RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 SYNJ2O15056 1496 aa33.04■■■□□ 2.88
MAP1LC3A-201ENST00000360668 ARHGAP35Q9NRY4 1499 aa33.04■■■□□ 2.88
MAP1LC3A-201ENST00000360668 VPS8Q8N3P4 1428 aa33.03■■■□□ 2.88
MAP1LC3A-201ENST00000360668 ARAP1Q96P48 1450 aa33.02■■■□□ 2.88
MAP1LC3A-201ENST00000360668 GRIN2AQ12879 1464 aa33.01■■■□□ 2.88
MAP1LC3A-201ENST00000360668 FBLN2P98095 1184 aa32.97■■■□□ 2.87
MAP1LC3A-201ENST00000360668 EFCAB5A4FU69 1503 aa32.96■■■□□ 2.87
MAP1LC3A-201ENST00000360668 CHMP7Q8WUX9 453 aaPredicted RBP32.92■■■□□ 2.86
MAP1LC3A-201ENST00000360668 IQGAP2Q13576 1575 aa32.89■■■□□ 2.86
MAP1LC3A-201ENST00000360668 CHD1O14646 1710 aa32.87■■■□□ 2.85
MAP1LC3A-201ENST00000360668 KIAA0586Q9BVV6 1533 aa32.85■■■□□ 2.85
MAP1LC3A-201ENST00000360668 SAMD9Q5K651 1589 aa32.84■■■□□ 2.85
MAP1LC3A-201ENST00000360668 NUP160Q12769 1436 aa32.8■■■□□ 2.84
MAP1LC3A-201ENST00000360668 CEP170Q5SW79 1584 aa32.79■■■□□ 2.84
MAP1LC3A-201ENST00000360668 UGGT2Q9NYU1 1516 aa32.75■■■□□ 2.83
MAP1LC3A-201ENST00000360668 FHOD3Q2V2M9 1422 aa32.73■■■□□ 2.83
MAP1LC3A-201ENST00000360668 P3H3Q8IVL6 736 aa32.7■■■□□ 2.82
MAP1LC3A-201ENST00000360668 APLP2Q06481 763 aa32.66■■■□□ 2.82
MAP1LC3A-201ENST00000360668 TRIM26Q12899 539 aaPredicted RBP32.66■■■□□ 2.82
MAP1LC3A-201ENST00000360668 ARHGEF11O15085 1522 aa32.65■■■□□ 2.82
MAP1LC3A-201ENST00000360668 FMN1Q68DA7 1419 aa32.64■■■□□ 2.82
MAP1LC3A-201ENST00000360668 RIMBP3CA6NJZ7 1639 aa32.63■■■□□ 2.81
MAP1LC3A-201ENST00000360668 RIMBP3BA6NNM3 1639 aa32.63■■■□□ 2.81
MAP1LC3A-201ENST00000360668 RIMBP3Q9UFD9 1639 aa32.63■■■□□ 2.81
MAP1LC3A-201ENST00000360668 PPARGC1BQ86YN6 1023 aaKnown RBP32.62■■■□□ 2.81
MAP1LC3A-201ENST00000360668 CLASP1Q7Z460 1538 aa32.6■■■□□ 2.81
MAP1LC3A-201ENST00000360668 PCF11O94913 1555 aaKnown RBP32.56■■■□□ 2.8
MAP1LC3A-201ENST00000360668 DISP1Q96F81 1524 aa32.56■■■□□ 2.8
MAP1LC3A-201ENST00000360668 KIAA0556O60303 1618 aa32.56■■■□□ 2.8
MAP1LC3A-201ENST00000360668 CASKIN1Q8WXD9 1431 aa32.56■■■□□ 2.8
MAP1LC3A-201ENST00000360668 FYCO1Q9BQS8 1478 aa32.55■■■□□ 2.8
MAP1LC3A-201ENST00000360668 MAP3K1Q13233 1512 aa32.53■■■□□ 2.8
MAP1LC3A-201ENST00000360668 PCGF6Q9BYE7 350 aa32.53■■■□□ 2.8
MAP1LC3A-201ENST00000360668 JPH4Q96JJ6 628 aa32.5■■■□□ 2.79
MAP1LC3A-201ENST00000360668 CARMIL2Q6F5E8 1435 aa32.45■■■□□ 2.79
MAP1LC3A-201ENST00000360668 TIAM1Q13009 1591 aa32.45■■■□□ 2.78
MAP1LC3A-201ENST00000360668 CYB5RLQ6IPT4 315 aa32.44■■■□□ 2.78
MAP1LC3A-201ENST00000360668 CFAP43Q8NDM7 1665 aa32.41■■■□□ 2.78
MAP1LC3A-201ENST00000360668 TTBK1Q5TCY1 1321 aaPredicted RBP32.38■■■□□ 2.77
MAP1LC3A-201ENST00000360668 SHROOM2Q13796 1616 aa32.38■■■□□ 2.77
MAP1LC3A-201ENST00000360668 KANK4Q5T7N3 995 aaPredicted RBP32.35■■■□□ 2.77
MAP1LC3A-201ENST00000360668 ATP1B4Q9UN42 357 aaPredicted RBP32.33■■■□□ 2.77
MAP1LC3A-201ENST00000360668 HECW1Q76N89 1606 aa32.32■■■□□ 2.76
MAP1LC3A-201ENST00000360668 PRG4Q92954 1404 aaPredicted RBP32.3■■■□□ 2.76
MAP1LC3A-201ENST00000360668 LRRC9Q6ZRR7 1453 aa32.29■■■□□ 2.76
MAP1LC3A-201ENST00000360668 LRRIQ1Q96JM4 1722 aa32.27■■■□□ 2.76
MAP1LC3A-201ENST00000360668 CCDC18Q5T9S5 1454 aa32.26■■■□□ 2.75
MAP1LC3A-201ENST00000360668 RAPGEF6Q8TEU7 1601 aa32.23■■■□□ 2.75
MAP1LC3A-201ENST00000360668 EPRSP07814 1512 aaKnown RBP32.17■■■□□ 2.74
MAP1LC3A-201ENST00000360668 ERCC6L2Q5T890 1561 aa32.15■■■□□ 2.74
MAP1LC3A-201ENST00000360668 NUP153P49790 1475 aaKnown RBP32.13■■■□□ 2.73
MAP1LC3A-201ENST00000360668 PLB1Q6P1J6 1458 aa32.11■■■□□ 2.73
MAP1LC3A-201ENST00000360668 ABCA8O94911 1581 aa32.11■■■□□ 2.73
MAP1LC3A-201ENST00000360668 PTPRGP23470 1445 aa32.11■■■□□ 2.73
MAP1LC3A-201ENST00000360668 MTUS2Q5JR59 1369 aa32.08■■■□□ 2.73
MAP1LC3A-201ENST00000360668 EHBP1L1Q8N3D4 1523 aa32.07■■■□□ 2.72
MAP1LC3A-201ENST00000360668 CDK13Q14004 1512 aaKnown RBP32.06■■■□□ 2.72
MAP1LC3A-201ENST00000360668 RRBP1Q9P2E9 1410 aaKnown RBP32.02■■■□□ 2.72
MAP1LC3A-201ENST00000360668 MAGI3Q5TCQ9 1506 aa32■■■□□ 2.71
MAP1LC3A-201ENST00000360668 SUPT6HQ7KZ85 1726 aaKnown RBP31.97■■■□□ 2.71
MAP1LC3A-201ENST00000360668 PHLDB1Q86UU1 1377 aa31.96■■■□□ 2.71
MAP1LC3A-201ENST00000360668 UACAQ9BZF9 1416 aa31.94■■■□□ 2.7
MAP1LC3A-201ENST00000360668 ARID3CA6NKF2 412 aa31.92■■■□□ 2.7
MAP1LC3A-201ENST00000360668 CDK11AQ9UQ88 783 aaPredicted RBP31.92■■■□□ 2.7
MAP1LC3A-201ENST00000360668 CCNB3Q8WWL7 1395 aa31.91■■■□□ 2.7
MAP1LC3A-201ENST00000360668 NCOA2Q15596 1464 aa31.9■■■□□ 2.7
MAP1LC3A-201ENST00000360668 ATP10BO94823 1461 aa31.87■■■□□ 2.69
MAP1LC3A-201ENST00000360668 ABCC2Q92887 1545 aa31.86■■■□□ 2.69
MAP1LC3A-201ENST00000360668 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.85■■■□□ 2.69
MAP1LC3A-201ENST00000360668 HNRNPUL2Q1KMD3 747 aaKnown RBP31.85■■■□□ 2.69
MAP1LC3A-201ENST00000360668 TRHP20396 242 aaPredicted RBP31.82■■■□□ 2.68
MAP1LC3A-201ENST00000360668 TROQ12816 1431 aaPredicted RBP31.82■■■□□ 2.68
MAP1LC3A-201ENST00000360668 UHRF1BP1LA0JNW5 1464 aa31.81■■■□□ 2.68
MAP1LC3A-201ENST00000360668 MYOM3Q5VTT5 1437 aa31.78■■■□□ 2.68
MAP1LC3A-201ENST00000360668 FGD6Q6ZV73 1430 aa31.77■■■□□ 2.68
MAP1LC3A-201ENST00000360668 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.76■■■□□ 2.67
MAP1LC3A-201ENST00000360668 ADCY10Q96PN6 1610 aa31.76■■■□□ 2.67
MAP1LC3A-201ENST00000360668 PLEKHD1A6NEE1 506 aa31.72■■■□□ 2.67
MAP1LC3A-201ENST00000360668 HRCP23327 699 aa31.69■■■□□ 2.66
MAP1LC3A-201ENST00000360668 KDM5BQ9UGL1 1544 aa31.66■■■□□ 2.66
MAP1LC3A-201ENST00000360668 MIA2Q96PC5 1412 aa31.65■■■□□ 2.66
MAP1LC3A-201ENST00000360668 KIF14Q15058 1648 aa31.64■■■□□ 2.66
MAP1LC3A-201ENST00000360668 FAM50AQ14320 339 aaKnown RBP31.64■■■□□ 2.65
MAP1LC3A-201ENST00000360668 ZCCHC11Q5TAX3 1644 aaKnown RBP31.62■■■□□ 2.65
MAP1LC3A-201ENST00000360668 PTPN23Q9H3S7 1636 aa31.62■■■□□ 2.65
MAP1LC3A-201ENST00000360668 TCOF1Q13428 1488 aaKnown RBP31.6■■■□□ 2.65
MAP1LC3A-201ENST00000360668 NPM1P06748 294 aaKnown RBP eCLIP31.57■■■□□ 2.64
MAP1LC3A-201ENST00000360668 ITSN2Q9NZM3 1697 aa31.56■■■□□ 2.64
MAP1LC3A-201ENST00000360668 ABCC10Q5T3U5 1492 aa31.55■■■□□ 2.64
MAP1LC3A-201ENST00000360668 GPATCH8Q9UKJ3 1502 aaKnown RBP31.52■■■□□ 2.64
MAP1LC3A-201ENST00000360668 ITGAEP38570 1179 aa31.51■■■□□ 2.63
MAP1LC3A-201ENST00000360668 CDC42BPAQ5VT25 1732 aa31.45■■■□□ 2.63
MAP1LC3A-201ENST00000360668 MAPKBP1O60336 1514 aa31.42■■■□□ 2.62
MAP1LC3A-201ENST00000360668 CFDP1Q9UEE9 299 aaPredicted RBP31.42■■■□□ 2.62
MAP1LC3A-201ENST00000360668 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.38■■■□□ 2.61
MAP1LC3A-201ENST00000360668 PTPRKQ15262 1439 aa31.36■■■□□ 2.61
MAP1LC3A-201ENST00000360668 TTC37Q6PGP7 1564 aa31.36■■■□□ 2.61
MAP1LC3A-201ENST00000360668 CAMSAP2Q08AD1 1489 aa31.36■■■□□ 2.61
MAP1LC3A-201ENST00000360668 WDR7Q9Y4E6 1490 aa31.36■■■□□ 2.61
MAP1LC3A-201ENST00000360668 ZEB1P37275 1124 aaPredicted RBP31.35■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms