RNA–Protein interactions for RNA: ENST00000360356.6

PARP9-201, Transcript of poly(ADP-ribose) polymerase family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PARP9, Length 3,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP9-201ENST00000360356 RTN4Q9NQC3 1192 aaKnown RBP12.55□□□□□ -0.4
PARP9-201ENST00000360356 PRDM2Q13029 1718 aa12.54□□□□□ -0.4
PARP9-201ENST00000360356 PKNOX2Q96KN3 472 aa12.52□□□□□ -0.41
PARP9-201ENST00000360356 IL27Q8NEV9 243 aa12.52□□□□□ -0.41
PARP9-201ENST00000360356 HMGXB3Q12766 1538 aa12.5□□□□□ -0.41
PARP9-201ENST00000360356 NBR1Q14596 966 aa12.49□□□□□ -0.41
PARP9-201ENST00000360356 NEFLP07196 543 aa12.48□□□□□ -0.41
PARP9-201ENST00000360356 PLEKHG5O94827 1062 aa12.47□□□□□ -0.41
PARP9-201ENST00000360356 TIMELESSQ9UNS1 1208 aa12.46□□□□□ -0.41
PARP9-201ENST00000360356 CFAP43Q8NDM7 1665 aa12.45□□□□□ -0.42
PARP9-201ENST00000360356 HNRNPUL2Q1KMD3 747 aaKnown RBP12.44□□□□□ -0.42
PARP9-201ENST00000360356 KCNH8Q96L42 1107 aa12.44□□□□□ -0.42
PARP9-201ENST00000360356 MAPKBP1O60336 1514 aa12.43□□□□□ -0.42
PARP9-201ENST00000360356 CCNB3Q8WWL7 1395 aa12.42□□□□□ -0.42
PARP9-201ENST00000360356 TIAM1Q13009 1591 aa12.42□□□□□ -0.42
PARP9-201ENST00000360356 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.4□□□□□ -0.42
PARP9-201ENST00000360356 KIF27Q86VH2 1401 aa12.4□□□□□ -0.42
PARP9-201ENST00000360356 CDK11AQ9UQ88 783 aaPredicted RBP12.38□□□□□ -0.43
PARP9-201ENST00000360356 ARHGAP35Q9NRY4 1499 aa12.38□□□□□ -0.43
PARP9-201ENST00000360356 CUX1P39880 1505 aa12.36□□□□□ -0.43
PARP9-201ENST00000360356 PODXL2Q9NZ53 605 aa12.35□□□□□ -0.43
PARP9-201ENST00000360356 NCAPD3P42695 1498 aa12.34□□□□□ -0.43
PARP9-201ENST00000360356 CCER2I3L3R5 266 aa12.34□□□□□ -0.43
PARP9-201ENST00000360356 DAXXQ9UER7 740 aaPredicted RBP12.32□□□□□ -0.44
PARP9-201ENST00000360356 SETD5Q9C0A6 1442 aa12.32□□□□□ -0.44
PARP9-201ENST00000360356 NOP58Q9Y2X3 529 aaKnown RBP12.32□□□□□ -0.44
PARP9-201ENST00000360356 AQRO60306 1485 aaKnown RBP eCLIP12.31□□□□□ -0.44
PARP9-201ENST00000360356 CFTRP13569 1480 aa12.31□□□□□ -0.44
PARP9-201ENST00000360356 RTL5Q5HYW3 569 aaPredicted RBP12.31□□□□□ -0.44
PARP9-201ENST00000360356 PAK3O75914 559 aaPredicted RBP12.3□□□□□ -0.44
PARP9-201ENST00000360356 LRRC9Q6ZRR7 1453 aa12.3□□□□□ -0.44
PARP9-201ENST00000360356 EFCAB5A4FU69 1503 aa12.29□□□□□ -0.44
PARP9-201ENST00000360356 FHAD1B1AJZ9 1412 aa12.29□□□□□ -0.44
PARP9-201ENST00000360356 RAB3GAP2Q9H2M9 1393 aa12.28□□□□□ -0.44
PARP9-201ENST00000360356 WDR97A6NE52 1622 aa12.26□□□□□ -0.45
PARP9-201ENST00000360356 KANK4Q5T7N3 995 aaPredicted RBP12.25□□□□□ -0.45
PARP9-201ENST00000360356 FYCO1Q9BQS8 1478 aa12.25□□□□□ -0.45
PARP9-201ENST00000360356 TRIM52Q96A61 297 aa12.24□□□□□ -0.45
PARP9-201ENST00000360356 PPP1R15AO75807 674 aaPredicted RBP12.23□□□□□ -0.45
PARP9-201ENST00000360356 IRX6P78412 446 aaPredicted RBP12.22□□□□□ -0.45
PARP9-201ENST00000360356 THOC2Q8NI27 1593 aaKnown RBP12.22□□□□□ -0.45
PARP9-201ENST00000360356 CC2D2AQ9P2K1 1620 aa12.22□□□□□ -0.45
PARP9-201ENST00000360356 KIF21AQ7Z4S6 1674 aa12.22□□□□□ -0.45
PARP9-201ENST00000360356 CUL7Q14999 1698 aa12.2□□□□□ -0.46
PARP9-201ENST00000360356 PCF11O94913 1555 aaKnown RBP12.2□□□□□ -0.46
PARP9-201ENST00000360356 CTTNBP2Q8WZ74 1663 aa12.19□□□□□ -0.46
PARP9-201ENST00000360356 FGD5Q6ZNL6 1462 aa12.18□□□□□ -0.46
PARP9-201ENST00000360356 CASKIN1Q8WXD9 1431 aa12.16□□□□□ -0.46
PARP9-201ENST00000360356 ZMYND15Q9H091 742 aa12.16□□□□□ -0.46
PARP9-201ENST00000360356 POLR1AO95602 1720 aaPredicted RBP12.15□□□□□ -0.46
PARP9-201ENST00000360356 IGF1RP08069 1367 aa12.15□□□□□ -0.46
PARP9-201ENST00000360356 BRPF3Q9ULD4 1205 aa12.14□□□□□ -0.47
PARP9-201ENST00000360356 GCC2Q8IWJ2 1684 aa12.14□□□□□ -0.47
PARP9-201ENST00000360356 VSIG10Q8N0Z9 540 aa12.13□□□□□ -0.47
PARP9-201ENST00000360356 HECW1Q76N89 1606 aa12.13□□□□□ -0.47
PARP9-201ENST00000360356 PHLDB1Q86UU1 1377 aa12.13□□□□□ -0.47
PARP9-201ENST00000360356 GLIPR1L2Q4G1C9 344 aa12.13□□□□□ -0.47
PARP9-201ENST00000360356 UACAQ9BZF9 1416 aa12.13□□□□□ -0.47
PARP9-201ENST00000360356 PTPN23Q9H3S7 1636 aa12.12□□□□□ -0.47
PARP9-201ENST00000360356 HFM1A2PYH4 1435 aa12.12□□□□□ -0.47
PARP9-201ENST00000360356 AKNAQ7Z591 1439 aa12.12□□□□□ -0.47
PARP9-201ENST00000360356 ABCA5Q8WWZ7 1642 aa12.11□□□□□ -0.47
PARP9-201ENST00000360356 NCOA2Q15596 1464 aa12.11□□□□□ -0.47
PARP9-201ENST00000360356 KDM5BQ9UGL1 1544 aa12.1□□□□□ -0.47
PARP9-201ENST00000360356 C11orf95C9JLR9 678 aaPredicted RBP12.1□□□□□ -0.47
PARP9-201ENST00000360356 ANP32CO43423 234 aa12.1□□□□□ -0.47
PARP9-201ENST00000360356 SAMD9Q5K651 1589 aa12.09□□□□□ -0.47
PARP9-201ENST00000360356 CCDC18Q5T9S5 1454 aa12.09□□□□□ -0.47
PARP9-201ENST00000360356 WASHC2AQ641Q2 1341 aa12.09□□□□□ -0.47
PARP9-201ENST00000360356 CARMIL1Q5VZK9 1371 aa12.08□□□□□ -0.48
PARP9-201ENST00000360356 ZBTB47Q9UFB7 747 aaPredicted RBP12.08□□□□□ -0.48
PARP9-201ENST00000360356 DDX10Q13206 875 aaKnown RBP12.07□□□□□ -0.48
PARP9-201ENST00000360356 IPO9Q96P70 1041 aaKnown RBP12.07□□□□□ -0.48
PARP9-201ENST00000360356 RSPH6AQ9H0K4 717 aa12.07□□□□□ -0.48
PARP9-201ENST00000360356 FMN1Q68DA7 1419 aa12.07□□□□□ -0.48
PARP9-201ENST00000360356 ANP32AP39687 249 aaKnown RBP12.07□□□□□ -0.48
PARP9-201ENST00000360356 ABCA10Q8WWZ4 1543 aa12.07□□□□□ -0.48
PARP9-201ENST00000360356 FGD6Q6ZV73 1430 aa12.07□□□□□ -0.48
PARP9-201ENST00000360356 ARHGEF11O15085 1522 aa12.06□□□□□ -0.48
PARP9-201ENST00000360356 SUPT6HQ7KZ85 1726 aaKnown RBP12.06□□□□□ -0.48
PARP9-201ENST00000360356 DNMBPQ6XZF7 1577 aa12.06□□□□□ -0.48
PARP9-201ENST00000360356 EHBP1L1Q8N3D4 1523 aa12.06□□□□□ -0.48
PARP9-201ENST00000360356 SNAPC4Q5SXM2 1469 aa12.06□□□□□ -0.48
PARP9-201ENST00000360356 PABPN1Q86U42 306 aaKnown RBP eCLIP12.05□□□□□ -0.48
PARP9-201ENST00000360356 PPP4R2Q9NY27 417 aa12.05□□□□□ -0.48
PARP9-201ENST00000360356 WASHC2CQ9Y4E1 1318 aa12.04□□□□□ -0.48
PARP9-201ENST00000360356 B4GALNT3Q6L9W6 998 aa12.04□□□□□ -0.48
PARP9-201ENST00000360356 TCOF1Q13428 1488 aaKnown RBP12.04□□□□□ -0.48
PARP9-201ENST00000360356 NEFMP07197 916 aa12.04□□□□□ -0.48
PARP9-201ENST00000360356 LAS1LQ9Y4W2 734 aaKnown RBP12.01□□□□□ -0.49
PARP9-201ENST00000360356 TONSLQ96HA7 1378 aa12.01□□□□□ -0.49
PARP9-201ENST00000360356 LRRIQ1Q96JM4 1722 aa12□□□□□ -0.49
PARP9-201ENST00000360356 A0A0U1RQG5 324 aaPredicted RBP12□□□□□ -0.49
PARP9-201ENST00000360356 CADPSQ9ULU8 1353 aa12□□□□□ -0.49
PARP9-201ENST00000360356 UGGT2Q9NYU1 1516 aa11.99□□□□□ -0.49
PARP9-201ENST00000360356 NAIPQ13075 1403 aa11.98□□□□□ -0.49
PARP9-201ENST00000360356 GRIN2BQ13224 1484 aa11.98□□□□□ -0.49
PARP9-201ENST00000360356 MYOM3Q5VTT5 1437 aa11.98□□□□□ -0.49
PARP9-201ENST00000360356 CNTLNQ9NXG0 1405 aa11.98□□□□□ -0.49
PARP9-201ENST00000360356 USP35Q9P2H5 1018 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms