RNA–Protein interactions for RNA: ENST00000360286.2

SUDS3-201, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 510 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-201ENST00000360286 KIAA0586Q9BVV6 1533 aa10.58□□□□□ -0.72
SUDS3-201ENST00000360286 RIMBP3CA6NJZ7 1639 aa10.55□□□□□ -0.72
SUDS3-201ENST00000360286 RIMBP3BA6NNM3 1639 aa10.55□□□□□ -0.72
SUDS3-201ENST00000360286 RIMBP3Q9UFD9 1639 aa10.55□□□□□ -0.72
SUDS3-201ENST00000360286 ARHGEF11O15085 1522 aa10.55□□□□□ -0.72
SUDS3-201ENST00000360286 UBTFP17480 764 aaKnown RBP10.54□□□□□ -0.72
SUDS3-201ENST00000360286 ERCC6L2Q5T890 1561 aa10.54□□□□□ -0.72
SUDS3-201ENST00000360286 KIF21BO75037 1637 aa10.54□□□□□ -0.72
SUDS3-201ENST00000360286 PRG4Q92954 1404 aaPredicted RBP10.53□□□□□ -0.72
SUDS3-201ENST00000360286 SHROOM2Q13796 1616 aa10.53□□□□□ -0.72
SUDS3-201ENST00000360286 RANGAP1P46060 587 aaPredicted RBP10.52□□□□□ -0.73
SUDS3-201ENST00000360286 CYB5RLQ6IPT4 315 aa10.52□□□□□ -0.73
SUDS3-201ENST00000360286 IQGAP2Q13576 1575 aa10.51□□□□□ -0.73
SUDS3-201ENST00000360286 CTTNBP2Q8WZ74 1663 aa10.5□□□□□ -0.73
SUDS3-201ENST00000360286 GOLGA3Q08378 1498 aa10.5□□□□□ -0.73
SUDS3-201ENST00000360286 LOC105371045A0A1W2PR82 267 aa10.5□□□□□ -0.73
SUDS3-201ENST00000360286 TTBK1Q5TCY1 1321 aaPredicted RBP10.49□□□□□ -0.73
SUDS3-201ENST00000360286 ARAP1Q96P48 1450 aa10.49□□□□□ -0.73
SUDS3-201ENST00000360286 P3H3Q8IVL6 736 aa10.48□□□□□ -0.73
SUDS3-201ENST00000360286 UGGT2Q9NYU1 1516 aa10.47□□□□□ -0.73
SUDS3-201ENST00000360286 DISP1Q96F81 1524 aa10.46□□□□□ -0.74
SUDS3-201ENST00000360286 CARMIL2Q6F5E8 1435 aa10.45□□□□□ -0.74
SUDS3-201ENST00000360286 TNIKQ9UKE5 1360 aa10.43□□□□□ -0.74
SUDS3-201ENST00000360286 PTPRGP23470 1445 aa10.42□□□□□ -0.74
SUDS3-201ENST00000360286 KIAA0556O60303 1618 aa10.41□□□□□ -0.74
SUDS3-201ENST00000360286 SAMD9Q5K651 1589 aa10.38□□□□□ -0.75
SUDS3-201ENST00000360286 FHOD3Q2V2M9 1422 aa10.37□□□□□ -0.75
SUDS3-201ENST00000360286 ARHGAP35Q9NRY4 1499 aa10.36□□□□□ -0.75
SUDS3-201ENST00000360286 UACAQ9BZF9 1416 aa10.34□□□□□ -0.75
SUDS3-201ENST00000360286 PLB1Q6P1J6 1458 aa10.34□□□□□ -0.75
SUDS3-201ENST00000360286 CLIP1P30622 1438 aa10.33□□□□□ -0.76
SUDS3-201ENST00000360286 EFCAB5A4FU69 1503 aa10.33□□□□□ -0.76
SUDS3-201ENST00000360286 ADCY10Q96PN6 1610 aa10.33□□□□□ -0.76
SUDS3-201ENST00000360286 NPM1P06748 294 aaKnown RBP eCLIP10.33□□□□□ -0.76
SUDS3-201ENST00000360286 ARID3CA6NKF2 412 aa10.32□□□□□ -0.76
SUDS3-201ENST00000360286 CEP162Q5TB80 1403 aa10.32□□□□□ -0.76
SUDS3-201ENST00000360286 ABCA8O94911 1581 aa10.31□□□□□ -0.76
SUDS3-201ENST00000360286 UHRF1BP1LA0JNW5 1464 aa10.3□□□□□ -0.76
SUDS3-201ENST00000360286 ATP1B4Q9UN42 357 aaPredicted RBP10.3□□□□□ -0.76
SUDS3-201ENST00000360286 ABCC2Q92887 1545 aa10.29□□□□□ -0.76
SUDS3-201ENST00000360286 RAPGEF6Q8TEU7 1601 aa10.27□□□□□ -0.77
SUDS3-201ENST00000360286 TRHP20396 242 aaPredicted RBP10.27□□□□□ -0.77
SUDS3-201ENST00000360286 FMN1Q68DA7 1419 aa10.26□□□□□ -0.77
SUDS3-201ENST00000360286 ATP10BO94823 1461 aa10.26□□□□□ -0.77
SUDS3-201ENST00000360286 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.26□□□□□ -0.77
SUDS3-201ENST00000360286 HNRNPUL2Q1KMD3 747 aaKnown RBP10.26□□□□□ -0.77
SUDS3-201ENST00000360286 KDM5BQ9UGL1 1544 aa10.26□□□□□ -0.77
SUDS3-201ENST00000360286 ZCCHC11Q5TAX3 1644 aaKnown RBP10.25□□□□□ -0.77
SUDS3-201ENST00000360286 NUP153P49790 1475 aaKnown RBP10.24□□□□□ -0.77
SUDS3-201ENST00000360286 AEBP2Q6ZN18 517 aaPredicted RBP10.24□□□□□ -0.77
SUDS3-201ENST00000360286 KCNH8Q96L42 1107 aa10.23□□□□□ -0.77
SUDS3-201ENST00000360286 ASXL2Q76L83 1435 aa10.23□□□□□ -0.77
SUDS3-201ENST00000360286 FAM69CQ0P6D2 419 aa10.22□□□□□ -0.77
SUDS3-201ENST00000360286 CASKIN1Q8WXD9 1431 aa10.22□□□□□ -0.77
SUDS3-201ENST00000360286 MAPKBP1O60336 1514 aa10.22□□□□□ -0.77
SUDS3-201ENST00000360286 PLEKHD1A6NEE1 506 aa10.2□□□□□ -0.78
SUDS3-201ENST00000360286 PCF11O94913 1555 aaKnown RBP10.2□□□□□ -0.78
SUDS3-201ENST00000360286 CDK13Q14004 1512 aaKnown RBP10.2□□□□□ -0.78
SUDS3-201ENST00000360286 LRRIQ1Q96JM4 1722 aa10.19□□□□□ -0.78
SUDS3-201ENST00000360286 EPRSP07814 1512 aaKnown RBP10.19□□□□□ -0.78
SUDS3-201ENST00000360286 HECW1Q76N89 1606 aa10.18□□□□□ -0.78
SUDS3-201ENST00000360286 ABCC10Q5T3U5 1492 aa10.18□□□□□ -0.78
SUDS3-201ENST00000360286 VPS8Q8N3P4 1428 aa10.17□□□□□ -0.78
SUDS3-201ENST00000360286 KIF13AQ9H1H9 1805 aa10.17□□□□□ -0.78
SUDS3-201ENST00000360286 FYCO1Q9BQS8 1478 aa10.17□□□□□ -0.78
SUDS3-201ENST00000360286 WDR7Q9Y4E6 1490 aa10.17□□□□□ -0.78
SUDS3-201ENST00000360286 DIP2BQ9P265 1576 aa10.15□□□□□ -0.78
SUDS3-201ENST00000360286 CDK11AQ9UQ88 783 aaPredicted RBP10.15□□□□□ -0.78
SUDS3-201ENST00000360286 CCDC18Q5T9S5 1454 aa10.13□□□□□ -0.79
SUDS3-201ENST00000360286 TSPOAP1O95153 1857 aa10.13□□□□□ -0.79
SUDS3-201ENST00000360286 GLI2P10070 1586 aa10.12□□□□□ -0.79
SUDS3-201ENST00000360286 MAGI3Q5TCQ9 1506 aa10.12□□□□□ -0.79
SUDS3-201ENST00000360286 KANK4Q5T7N3 995 aaPredicted RBP10.11□□□□□ -0.79
SUDS3-201ENST00000360286 TROQ12816 1431 aaPredicted RBP10.1□□□□□ -0.79
SUDS3-201ENST00000360286 CD109Q6YHK3 1445 aa10.09□□□□□ -0.79
SUDS3-201ENST00000360286 APLP2Q06481 763 aa10.09□□□□□ -0.79
SUDS3-201ENST00000360286 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.08□□□□□ -0.8
SUDS3-201ENST00000360286 MAP3K4Q9Y6R4 1608 aa10.08□□□□□ -0.8
SUDS3-201ENST00000360286 MTUS2Q5JR59 1369 aa10.08□□□□□ -0.8
SUDS3-201ENST00000360286 KIF14Q15058 1648 aa10.07□□□□□ -0.8
SUDS3-201ENST00000360286 PPRC1Q5VV67 1664 aaKnown RBP10.07□□□□□ -0.8
SUDS3-201ENST00000360286 TIAM1Q13009 1591 aa10.07□□□□□ -0.8
SUDS3-201ENST00000360286 ABCA9Q8IUA7 1624 aa10.07□□□□□ -0.8
SUDS3-201ENST00000360286 CFAP43Q8NDM7 1665 aa10.06□□□□□ -0.8
SUDS3-201ENST00000360286 PPARGC1BQ86YN6 1023 aaKnown RBP10.06□□□□□ -0.8
SUDS3-201ENST00000360286 TTC37Q6PGP7 1564 aa10.05□□□□□ -0.8
SUDS3-201ENST00000360286 MAP3K1Q13233 1512 aa10.05□□□□□ -0.8
SUDS3-201ENST00000360286 LRRC9Q6ZRR7 1453 aa10.04□□□□□ -0.8
SUDS3-201ENST00000360286 PLCH2O75038 1416 aa10.03□□□□□ -0.8
SUDS3-201ENST00000360286 EHBP1L1Q8N3D4 1523 aa10.02□□□□□ -0.8
SUDS3-201ENST00000360286 EFCAB2Q5VUJ9 269 aa10.01□□□□□ -0.81
SUDS3-201ENST00000360286 ZNF777Q9ULD5 760 aaPredicted RBP10.01□□□□□ -0.81
SUDS3-201ENST00000360286 TEX14Q8IWB6 1497 aa10.01□□□□□ -0.81
SUDS3-201ENST00000360286 GPATCH8Q9UKJ3 1502 aaKnown RBP10.01□□□□□ -0.81
SUDS3-201ENST00000360286 CCNB3Q8WWL7 1395 aa10.01□□□□□ -0.81
SUDS3-201ENST00000360286 NCOA2Q15596 1464 aa10□□□□□ -0.81
SUDS3-201ENST00000360286 COL17A1Q9UMD9 1497 aaPredicted RBP10□□□□□ -0.81
SUDS3-201ENST00000360286 MYO5CQ9NQX4 1742 aa10□□□□□ -0.81
SUDS3-201ENST00000360286 CDC42BPBQ9Y5S2 1711 aa10□□□□□ -0.81
SUDS3-201ENST00000360286 AKNAQ7Z591 1439 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms