RNA–Protein interactions for RNA: ENST00000359175.8

SPTSSB-201, Transcript of serine palmitoyltransferase small subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSB, Length 3,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-201ENST00000359175 WDR97A6NE52 1622 aa18.44■□□□□ 0.54
SPTSSB-201ENST00000359175 IRX6P78412 446 aaPredicted RBP18.4■□□□□ 0.54
SPTSSB-201ENST00000359175 RTL5Q5HYW3 569 aaPredicted RBP18.39■□□□□ 0.53
SPTSSB-201ENST00000359175 RTN4Q9NQC3 1192 aaKnown RBP18.38■□□□□ 0.53
SPTSSB-201ENST00000359175 TIMELESSQ9UNS1 1208 aa18.35■□□□□ 0.53
SPTSSB-201ENST00000359175 RAPGEF2Q9Y4G8 1499 aa18.34■□□□□ 0.53
SPTSSB-201ENST00000359175 CCNB3Q8WWL7 1395 aa18.33■□□□□ 0.52
SPTSSB-201ENST00000359175 RAB3GAP2Q9H2M9 1393 aa18.32■□□□□ 0.52
SPTSSB-201ENST00000359175 HNRNPUQ00839 825 aaKnown RBP eCLIP18.32■□□□□ 0.52
SPTSSB-201ENST00000359175 KANK4Q5T7N3 995 aaPredicted RBP18.32■□□□□ 0.52
SPTSSB-201ENST00000359175 IPO9Q96P70 1041 aaKnown RBP18.31■□□□□ 0.52
SPTSSB-201ENST00000359175 WASHC2AQ641Q2 1341 aa18.3■□□□□ 0.52
SPTSSB-201ENST00000359175 C11orf95C9JLR9 678 aaPredicted RBP18.28■□□□□ 0.52
SPTSSB-201ENST00000359175 ARAP1Q96P48 1450 aa18.27■□□□□ 0.52
SPTSSB-201ENST00000359175 ANP32AP39687 249 aaKnown RBP18.25■□□□□ 0.51
SPTSSB-201ENST00000359175 SYNJ1O43426 1573 aa18.25■□□□□ 0.51
SPTSSB-201ENST00000359175 B4GALNT3Q6L9W6 998 aa18.25■□□□□ 0.51
SPTSSB-201ENST00000359175 ZBTB47Q9UFB7 747 aaPredicted RBP18.24■□□□□ 0.51
SPTSSB-201ENST00000359175 PKNOX2Q96KN3 472 aa18.23■□□□□ 0.51
SPTSSB-201ENST00000359175 SMARCA4P51532 1647 aa18.21■□□□□ 0.51
SPTSSB-201ENST00000359175 WASHC2CQ9Y4E1 1318 aa18.21■□□□□ 0.51
SPTSSB-201ENST00000359175 SETD5Q9C0A6 1442 aa18.21■□□□□ 0.5
SPTSSB-201ENST00000359175 SIN3AQ96ST3 1273 aa18.21■□□□□ 0.5
SPTSSB-201ENST00000359175 HIRIP3Q9BW71 556 aaPredicted RBP18.2■□□□□ 0.5
SPTSSB-201ENST00000359175 USP35Q9P2H5 1018 aa18.2■□□□□ 0.5
SPTSSB-201ENST00000359175 UNC13AQ9UPW8 1703 aa18.2■□□□□ 0.5
SPTSSB-201ENST00000359175 EIF5BO60841 1220 aaKnown RBP18.18■□□□□ 0.5
SPTSSB-201ENST00000359175 RANGAP1P46060 587 aaPredicted RBP18.17■□□□□ 0.5
SPTSSB-201ENST00000359175 ERICH3Q5RHP9 1530 aa18.14■□□□□ 0.5
SPTSSB-201ENST00000359175 NCAPD3P42695 1498 aa18.1■□□□□ 0.49
SPTSSB-201ENST00000359175 ZBED9Q6R2W3 1325 aa18.07■□□□□ 0.48
SPTSSB-201ENST00000359175 NEFMP07197 916 aa18.05■□□□□ 0.48
SPTSSB-201ENST00000359175 BRPF3Q9ULD4 1205 aa18.05■□□□□ 0.48
SPTSSB-201ENST00000359175 PRXQ9BXM0 1461 aa18.04■□□□□ 0.48
SPTSSB-201ENST00000359175 PEG3Q9GZU2 1588 aa18.04■□□□□ 0.48
SPTSSB-201ENST00000359175 BICRAQ9NZM4 1560 aa18.03■□□□□ 0.48
SPTSSB-201ENST00000359175 PPM1GO15355 546 aaPredicted RBP18.01■□□□□ 0.47
SPTSSB-201ENST00000359175 RSPH6AQ9H0K4 717 aa18.01■□□□□ 0.47
SPTSSB-201ENST00000359175 FHAD1B1AJZ9 1412 aa18■□□□□ 0.47
SPTSSB-201ENST00000359175 MAP3K1Q13233 1512 aa17.99■□□□□ 0.47
SPTSSB-201ENST00000359175 TONSLQ96HA7 1378 aa17.97■□□□□ 0.47
SPTSSB-201ENST00000359175 RNF123Q5XPI4 1314 aa17.97■□□□□ 0.47
SPTSSB-201ENST00000359175 GSE1Q14687 1217 aa17.95■□□□□ 0.46
SPTSSB-201ENST00000359175 SMG6Q86US8 1419 aaKnown RBP17.94■□□□□ 0.46
SPTSSB-201ENST00000359175 LAS1LQ9Y4W2 734 aaKnown RBP17.94■□□□□ 0.46
SPTSSB-201ENST00000359175 NCOA2Q15596 1464 aa17.94■□□□□ 0.46
SPTSSB-201ENST00000359175 CCDC184Q52MB2 194 aa17.94■□□□□ 0.46
SPTSSB-201ENST00000359175 TIAM1Q13009 1591 aa17.93■□□□□ 0.46
SPTSSB-201ENST00000359175 ARHGAP35Q9NRY4 1499 aa17.92■□□□□ 0.46
SPTSSB-201ENST00000359175 TOP2BQ02880 1626 aa17.92■□□□□ 0.46
SPTSSB-201ENST00000359175 CNTLNQ9NXG0 1405 aa17.91■□□□□ 0.46
SPTSSB-201ENST00000359175 FAM9BQ8IZU0 186 aa17.89■□□□□ 0.45
SPTSSB-201ENST00000359175 AKNAQ7Z591 1439 aa17.88■□□□□ 0.45
SPTSSB-201ENST00000359175 PRKRIP1Q9H875 184 aaPredicted RBP17.87■□□□□ 0.45
SPTSSB-201ENST00000359175 PHLDB1Q86UU1 1377 aa17.87■□□□□ 0.45
SPTSSB-201ENST00000359175 GLIPR1L2Q4G1C9 344 aa17.87■□□□□ 0.45
SPTSSB-201ENST00000359175 FAM43AQ8N2R8 423 aa17.86■□□□□ 0.45
SPTSSB-201ENST00000359175 KDM5BQ9UGL1 1544 aa17.86■□□□□ 0.45
SPTSSB-201ENST00000359175 LRRC9Q6ZRR7 1453 aa17.86■□□□□ 0.45
SPTSSB-201ENST00000359175 TCERG1O14776 1098 aaKnown RBP17.85■□□□□ 0.45
SPTSSB-201ENST00000359175 MRS2Q9HD23 443 aa17.85■□□□□ 0.45
SPTSSB-201ENST00000359175 ZMYND15Q9H091 742 aa17.85■□□□□ 0.45
SPTSSB-201ENST00000359175 NPM2Q86SE8 214 aaKnown RBP17.84■□□□□ 0.45
SPTSSB-201ENST00000359175 NUDCQ9Y266 331 aa17.84■□□□□ 0.45
SPTSSB-201ENST00000359175 BIVM-ERCC5R4GMW8 1640 aa17.84■□□□□ 0.45
SPTSSB-201ENST00000359175 FAM50AQ14320 339 aaKnown RBP17.81■□□□□ 0.44
SPTSSB-201ENST00000359175 PDE4AP27815 886 aa17.81■□□□□ 0.44
SPTSSB-201ENST00000359175 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.81■□□□□ 0.44
SPTSSB-201ENST00000359175 HSPA5P11021 654 aaKnown RBP17.8■□□□□ 0.44
SPTSSB-201ENST00000359175 BACH2Q9BYV9 841 aa17.8■□□□□ 0.44
SPTSSB-201ENST00000359175 FRAT1Q92837 279 aaPredicted RBP17.79■□□□□ 0.44
SPTSSB-201ENST00000359175 MS4A1P11836 297 aa17.79■□□□□ 0.44
SPTSSB-201ENST00000359175 PLEKHG5O94827 1062 aa17.78■□□□□ 0.44
SPTSSB-201ENST00000359175 PODXL2Q9NZ53 605 aa17.78■□□□□ 0.44
SPTSSB-201ENST00000359175 NFKBIBQ15653 356 aa17.77■□□□□ 0.44
SPTSSB-201ENST00000359175 DDRGK1Q96HY6 314 aa17.77■□□□□ 0.44
SPTSSB-201ENST00000359175 UACAQ9BZF9 1416 aa17.77■□□□□ 0.43
SPTSSB-201ENST00000359175 VSIG10Q8N0Z9 540 aa17.76■□□□□ 0.43
SPTSSB-201ENST00000359175 CFAP43Q8NDM7 1665 aa17.74■□□□□ 0.43
SPTSSB-201ENST00000359175 NCOA1Q15788 1441 aa17.73■□□□□ 0.43
SPTSSB-201ENST00000359175 EIF4G2P78344 907 aaKnown RBP eCLIP17.73■□□□□ 0.43
SPTSSB-201ENST00000359175 CCDC18Q5T9S5 1454 aa17.73■□□□□ 0.43
SPTSSB-201ENST00000359175 CCDC7Q96M83 1385 aa17.72■□□□□ 0.43
SPTSSB-201ENST00000359175 PABPN1Q86U42 306 aaKnown RBP eCLIP17.7■□□□□ 0.42
SPTSSB-201ENST00000359175 ABCA5Q8WWZ7 1642 aa17.69■□□□□ 0.42
SPTSSB-201ENST00000359175 DCAF11Q8TEB1 546 aa17.68■□□□□ 0.42
SPTSSB-201ENST00000359175 KIF27Q86VH2 1401 aa17.67■□□□□ 0.42
SPTSSB-201ENST00000359175 HFM1A2PYH4 1435 aa17.66■□□□□ 0.42
SPTSSB-201ENST00000359175 SLC24A1O60721 1099 aa17.66■□□□□ 0.42
SPTSSB-201ENST00000359175 POLR1AO95602 1720 aaPredicted RBP17.65■□□□□ 0.42
SPTSSB-201ENST00000359175 PTPN23Q9H3S7 1636 aa17.65■□□□□ 0.42
SPTSSB-201ENST00000359175 DAXXQ9UER7 740 aaPredicted RBP17.64■□□□□ 0.41
SPTSSB-201ENST00000359175 RRAGDQ9NQL2 400 aaPredicted RBP17.6■□□□□ 0.41
SPTSSB-201ENST00000359175 RRP1P56182 461 aaKnown RBP17.6■□□□□ 0.41
SPTSSB-201ENST00000359175 RRP9O43818 475 aaKnown RBP17.59■□□□□ 0.41
SPTSSB-201ENST00000359175 EXOC6Q8TAG9 804 aa17.59■□□□□ 0.41
SPTSSB-201ENST00000359175 AQRO60306 1485 aaKnown RBP eCLIP17.57■□□□□ 0.4
SPTSSB-201ENST00000359175 HSP90AA2PQ14568 343 aaPredicted RBP17.56■□□□□ 0.4
SPTSSB-201ENST00000359175 PCF11O94913 1555 aaKnown RBP17.56■□□□□ 0.4
SPTSSB-201ENST00000359175 NAIPQ13075 1403 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms